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* gnu: ant: Implement in terms of ant/java8.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (ant): Inherit from ant/java8.
* gnu: Add ant/java8.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (ant/java8): New variable.
* gnu: ant: Move after bootstrap packages.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (ant): Move package.
* gnu: ant: Delete bundled jars.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (ant)[source]: Delete bundled jars in a snippet.
* gnu: ant: Inherit from ant-bootstrap.Ricardo Wurmus2017-05-22
| | | | | | * gnu/packages/java.scm (ant)[build-system] [home-page][synopsis][description][license]: Remove fields. [arguments]: Adapt arguments of ant-bootstrap package.
* gnu: clojure: Move below bootstrap packages.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (clojure): Move package.
* gnu: java-swt: Move below the bootstrap packages.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (java-swt): Move the package.
* gnu: icedtea-7: Use icedtea-6 for bootstrapping.Ricardo Wurmus2017-05-22
| | | | | | | | | | | * gnu/packages/java.scm (icedtea-7)[source]: Remove Makefile.in patch to link with GCJ libs. [arguments]: Remove (ice-9 rdelim) module; adjust configure flags; do not add GCJ headers to CPATH in build phase "set-additional-paths". [native-inputs]: Remove gcj and ant; add icedtea-6 and ant-bootstrap. Remove autoconf and automake. (icedtea-8)[native-inputs]: Delete "icedtea" from the inherited inputs, not "gcj".
* gnu: Add icedtea-6.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (icedtea-6): New variable.
* gnu: Add ecj-javac-on-jamvm-wrapper-final.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (ecj-javac-on-jamvm-wrapper-final): New variable.
* gnu: Add jamvm.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (jamvm): New variable.
* gnu: Add classpath-devel.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (classpath-devel): New variable.
* gnu: Add ecj-javac-on-jamvm-wrapper.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (ecj-javac-on-jamvm-wrapper): New variable.
* gnu: Add classpath-jamvm-wrappers.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (classpath-jamvm-wrappers): New variable.
* gnu: Add jamvm-bootstrap.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (jamvm-bootstrap): New variable.
* gnu: Add classpath.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (classpath): New variable.
* gnu: Add ecj-javac-wrapper.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (ecj-javac-wrapper): New variable.
* gnu: Add ecj-bootstrap.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (ecj-bootstrap): New variable.
* gnu: Add ant-bootstrap.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (ant-bootstrap): New variable.
* gnu: Add sablevm.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (sablevm): New variable.
* gnu: Add sablevm-classpath.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (sablevm-classpath): New variable.
* gnu: Add jikes.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/java.scm (jikes): New variable.
* gnu: Add r-edaseq.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/bioinformatics.scm (r-edaseq): New variable.
* gnu: Add r-deseq.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/bioinformatics.scm (r-deseq): New variable.
* gnu: Add r-aroma-light.Ricardo Wurmus2017-05-22
| | | | * gnu/packages/bioinformatics.scm (r-aroma-light): New variable.
* Merge branch 'version-0.13.0'Marius Bakke2017-05-22
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| * Update NEWS.Ludovic Courtès2017-05-22
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| * gnu: guix: Update to a6d728b.Ludovic Courtès2017-05-21
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| * gnu: guix: Update to 0.13.0.Ludovic Courtès2017-05-21
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| * doc: Replace fingerprint of OpenPGP signing key.Ludovic Courtès2017-05-21
| | | | | | | | * doc/guix.texi (OPENPGP-SIGNING-KEY-ID): Change to Ludo's key.
| * Update NEWS.Ludovic Courtès2017-05-21
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| * tests: ssh: Use 'guile2.0-ssh'.Ludovic Courtès2017-05-21
| | | | | | | | | | | | Fixes a regression introduced in 4d8806c3d662c74e6d48d0f0d6ce423fce9a3a08. * gnu/tests/ssh.scm (run-ssh-test): Use GUILE2.0-SSH instead of GUILE-SSH.
| * guix system: Don't warn about old distros for "guix system init".Ludovic Courtès2017-05-21
| | | | | | | | | | * guix/scripts/system.scm (process-action): Don't call 'warn-about-old-distro' when ACTION is 'init' or 'build'.
| * guix system: Increase image size for 'guix system vm'.Ludovic Courtès2017-05-21
| | | | | | | | | | | | | | This is a followup to 9a1bfe764859365b6726f168da95b88a2d22403b. * guix/scripts/system.scm (system-derivation-for-action): Add 40MiB to the default size for 'vm'.
| * gnu: unionfs-fuse-static: Remove 'unionfsctl' executable.Ludovic Courtès2017-05-21
| | | | | | | | | | | | | | | | | | This avoids pulling in glibc & co. Fixes a regression introduced in 2f861edf5cf5118ad560737343312c9a5efe5b2f (the 'unionfsctl' executable did not exist in unionfs-fuse 0.26). * gnu/packages/linux.scm (unionfs-fuse/static)[arguments] <post-install>: Remove 'unionfsctl' binary.
| * vm: Increase default disk size to account for ESP partition.Marius Bakke2017-05-21
| | | | | | | | | | | | Fixes a test regression introduced by ecf5d5376979fadd971559367bf553df89fcc62b. * gnu/system/vm.scm (system-qemu-image/shared-store-script): 30MiB -> 70MiB.
| * Update NEWS.Ricardo Wurmus2017-05-20
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| * pack: Use 'guile2.0-json' when building with Guile 2.0.Ludovic Courtès2017-05-20
| | | | | | | | | | | | | | | | | | | | | | Fixes <http://bugs.gnu.org/27005>. Reported by Pjotr Prins <pjotr.public12@thebird.nl>. Fixes a regression introduced in commit 2252f087d4bd450ab41a71379320467887edfc0f. * guix/scripts/pack.scm (docker-image)[json]: New variable. [build]: Use it.
| * gnu: icedtea@2: Update to 2.6.10 [security fixes].Leo Famulari2017-05-20
| | | | | | | | | | | | Fixes CVE-2017-{3509,3511,3512,3514,3526,3533,3539,3544}. * gnu/packages/java.scm (icedtea-7): Update to 2.6.10.
| * gnu: dropbear: Update to 2017.75 [fixes CVE-2017-{9078,9079}].Leo Famulari2017-05-20
| | | | | | | | * gnu/packages/ssh.scm (dropbear): Update to 2017.75.
| * system: Use Guile 2.2 rather than 2.0 in %BASE-PACKAGES.Ludovic Courtès2017-05-20
| | | | | | | | * gnu/system.scm (%base-packages): Change GUILE-2.0 to GUILE-2.2.
| * vm: Add UEFI loader to disk images.Marius Bakke2017-05-20
| | | | | | | | | | | | | | | | * gnu/build/vm.scm (install-efi): New procedure. (initialize-hard-disk): Generate EFI blob when ESP is present. * gnu/system/vm.scm (qemu-image): Append 40MiB EFI System Partition. (cherry picked from commit ecf5d5376979fadd971559367bf553df89fcc62b)
| * vm: Support creating FAT partitions.Marius Bakke2017-05-20
| | | | | | | | | | | | | | * gnu/build/vm.scm (create-ext-file-system, create-fat-file-system): New procedures. (format-partition): Use them. Error for unknown file systems. * gnu/system/vm.scm (qemu-image): Include DOSFSTOOLS. * gnu/system/linux-initrd.scm (base-initrd): Always add nls_is8859-1.ko.
| * vm: Support arbitrary partition flags.Marius Bakke2017-05-20
| | | | | | | | | | | | | | * gnu/build/vm.scm (<partition>): Change BOOTABLE? to FLAGS. (initialize-partition-table): Pass each flag to parted. (initialize-hard-disk): Locate boot partition. * gnu/system/vm.scm (qemu-image): Adjust partition flags.
| * gnu: guile-ssh: Fix potential double-free/use-after-free issue.Ludovic Courtès2017-05-20
| | | | | | | | | | | | | | | | | | Fixes <http://bugs.gnu.org/26976>. Reported by Mark H Weaver <mhw@netris.org>. * gnu/packages/patches/guile-ssh-double-free.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ssh.scm (guile-ssh)[source](patches): Add it.
| * modules: Add more source-less modules.Ludovic Courtès2017-05-20
| | | | | | | | | | * guix/modules.scm (%source-less-modules): New variable. (source-module-dependencies): Use it.
| * publish: Fix narinfo rendering for already-compressed items.Ludovic Courtès2017-05-20
| | | | | | | | | | | | | | | | | | | | | | Fixes <http://bugs.gnu.org/26975>. Reported by Mark H Weaver <mhw@netris.org>. * guix/scripts/publish.scm (bake-narinfo+nar): Pass #f as the 2nd argument to 'stat' and properly handle #f. * tests/publish.scm (wait-for-file): New procedure. ("with cache"): Remove 'wait-for-file' procedure. ("with cache, uncompressed"): New test.
| * union: Gracefully handle dangling symlinks in the input.Ludovic Courtès2017-05-20
| | | | | | | | | | | | | | | | | | | | | | | | Fixes <http://bugs.gnu.org/26949>. Reported by Pjotr Prins <pjotr.public12@thebird.nl>. * guix/build/union.scm (file-is-directory?): Return #f when FILE does not exist or is a dangling symlink. (file=?): Pass #f as a second argument to 'stat'; return #f when both ST1 or ST2 is #f. * tests/profiles.scm (test-equalm): New macro. ("union vs. dangling symlink"): New test.
| * services: user-homes: Do not create home directories marked as no-create.Ludovic Courtès2017-05-20
| | | | | | | | | | | | | | | | | | | | | | | | Fixes a bug whereby GuixSD would create the /nonexistent directory, from user 'nobody', even though it has 'create-home-directory?' set to #f. * gnu/build/activation.scm (activate-users+groups): Add comment for \#:create-home?. (activate-user-home)[ensure-user-home]: Skip when CREATE-HOME? is #f or SYSTEM? is #t. * gnu/tests/base.scm (run-basic-test)["no extra home directories"]: New tests.
| * install: Enable SSH in installation image.Marius Bakke2017-05-20
| | | | | | | | | | * gnu/system/install.scm (%installation-services): Add OPENSSH-SERVICE-TYPE. * doc/guix.texi (Preparing for Installation)[Networking]: Document it.
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