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* graph: Add procedures to query a node's edges.Ludovic Courtès2015-11-21
| | | | | | | * guix/graph.scm (%node-edges, node-edges, node-back-edges) (node-transitive-edges): New procedures. * tests/graph.scm ("node-edges") ("node-transitive-edges + node-back-edges"): New tests.
* Add (guix graph).Ludovic Courtès2015-11-21
| | | | | | | | | * guix/scripts/graph.scm (<node-type>, <graph-backend>, emit-prologue) (emit-epilogue, emit-node, emit-edge, %graphviz-backend, export-graph): Move to... * guix/graph.scm: ... here. New file. * guix/scripts/system.scm, tests/graph.scm: Use it. * Makefile.am (MODULES): Add it.
* gnu: parted: Update to 3.2.Mathieu Lirzin2015-11-21
| | | | | | | | | * gnu/packages/disk.scm (parted): Update to 3.2. [inputs]: Add lvm2 and remove check. Replace readline-6.2 with its latest version. [native-inputs]: Add perl and python for the tests. [arguments]: Use `modify-phases' and adapt to the new tests. [home-page]: Use https.
* gnu: Add qemu-minimal.Ludovic Courtès2015-11-21
| | | | | | | | | | * gnu/packages/qemu.scm (qemu): Exchange with former QEMU-HEADLESS. (qemu-headless): Rename to... (qemu-minimal): ... this. New variable. Pass --target-list. * gnu/packages/debug.scm (qemu-2.3.0): Inherit from QEMU-MINIMAL. * gnu/packages/grub.scm (qemu-for-tests): Likewise. * gnu/system/vm.scm (expression->derivation-in-linux-vm, qemu-image): Update to name change.
* doc: Fix 'geiser-guile-load-path' example.Alex Kost2015-11-21
| | | | | | | Reported by marusich on #guix. * doc/contributing.texi (The Perfect Setup): Wrap modifying 'geiser-guile-load-path' into 'with-eval-after-load'.
* gnu: Add Synfig Studio.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/animation.scm (synfigstudio): New variable.
* gnu: Add Synfig.Ricardo Wurmus2015-11-20
| | | | | | * gnu/packages/animation.scm (synfig): New variable. * gnu/packages/patches/synfig-build-fix.patch: New file. * gnu-system.am (dist_patch_DATA): Add it.
* gnu: Add ETL.Ricardo Wurmus2015-11-20
| | | | | * gnu/packages/animation.scm: New file. * gnu-system.am (GNU_SYSTEM_MODULES): Add it.
* gnu: Add MLT.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/video.scm (mlt): New variable.
* gnu: Add libxml++.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/gnome.scm (libxml++): New variable.
* gnu: slepc: Update to 3.6.2.Eric Bavier2015-11-20
| | | | | | * gnu/packages/maths.scm (slepc): Update to 3.6.2. [arguments]: Append "/lib" to arpack configure flag. Use 'inputs' rather than '%build-inputs' in 'configure phase.
* gnu: petsc: Update to 3.6.2.Eric Bavier2015-11-20
| | | | * gnu/packages/maths.scm (petsc): Update to 3.6.2.
* gnu: mumps: Update to 5.0.1.Eric Bavier2015-11-20
| | | | * gnu/packages/maths.scm (mumps): Update to 5.0.1.
* gnu: openmpi: Update to 1.10.1.Eric Bavier2015-11-20
| | | | | | | * gnu/packages/mpi.scm (openmpi): Update to 1.10.1. [arguments]: Remove now-unsupported configure flags. Add --enable-builtin-atomics. Remove development-oriented --enable-debug.
* gnu: hwloc: Update to 1.11.1.Eric Bavier2015-11-20
| | | | | | | * gnu/packages/mpi.scm (hwloc): Update to 1.11.1. [source]: Remove patch. * gnu/packages/patches/hwloc-gather-topology-lstopo.patch: Delete it. * gnu-system.am (dist_patch_DATA): Remove it.
* gnu: guitarix: Update to 0.34.0.Ricardo Wurmus2015-11-20
| | | | | | | | * gnu/packages/audio.scm (guitarix): Update to 0.34.0. [source]: Remove patch. [inputs]: Add webkitgtk/gtk+-2. * gnu/packages/patches/guitarix-c++11: Remove file. * gnu-system.am (dist_patch_DATA): Remove it.
* gnu: services: Fix typo in gpm-dmd-service.David Thompson2015-11-20
| | | | * gnu/services/base.scm (gpm-dmd-service): s/dmd/gpm/
* gnu: Add emulation-station.David Thompson2015-11-20
| | | | * gnu/packages/games.scm (emulation-station): New variable.
* gnu: preseq: Update to 2.0.Ricardo Wurmus2015-11-20
| | | | | | | | | | | * gnu/packages/bioinformatics.scm (preseq): Update to 2.0. [source]: Add file-name field, remove patches. [arguments]: Remove unused build phases, add make flags. [inputs]: Add smithlab-cpp. * gnu/packages/patches/preseq-1.0.2-link-with-libbam.patch: Remove file. * gnu/packages/patches/preseq-1.0.2-install-to-PREFIX.patch: Remove file. * gnu-system.am (dist_patch_DATA): Remove them.
* gnu: Add smithlab-cpp.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/bioinformatics.scm (smithlab-cpp): New variable.
* gnu: edirect: Update home page.Ricardo Wurmus2015-11-20
| | | | | * gnu/packages/bioinformatics.scm (edirect)[home-page]: Append trailing slash to home page.
* gnu: sra-tools: Update to 2.5.4.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/bioinformatics.scm (sra-tools): Update to 2.5.4.
* gnu: ncbi-vdb: Update to 2.5.4.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/bioinformatics.scm (ncbi-vdb): Update to 2.5.4.
* gnu: ngs-java: Update to 1.2.2.Ricardo Wurmus2015-11-20
| | | | | * gnu/packages/bioinformatics.scm (ngs-java): Update to 1.2.2. [arguments]: Remove build phase "fix-java-symlink-installation".
* gnu: ngs-sdk: Update to 1.2.2.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/bioinformatics.scm (ngs-sdk): Update to 1.2.2.
* gnu: Add ruby-net-ssh.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/ruby.scm (ruby-net-ssh): New variable.
* gnu: Add ruby-mocha.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/ruby.scm (ruby-mocha): New variable.
* gnu: Add ruby-redcarpet.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/ruby.scm (ruby-redcarpet): New variable.
* gnu: Add ruby-introspection.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/ruby.scm (ruby-introspection): New variable.
* gnu: Add ruby-instantiator.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/ruby.scm (ruby-instantiator): New variable.
* gnu: Add ruby-blankslate.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/ruby.scm (ruby-blankslate): New variable.
* gnu: Add ruby-metaclass.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/ruby.scm (ruby-metaclass): New variable.
* gnu: Add ruby-test-unit.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/ruby.scm (ruby-test-unit): New variable.
* gnu: Add ruby-packnga.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/ruby.scm (ruby-packnga): New variable.
* gnu: Add ruby-gettext.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/ruby.scm (ruby-gettext): New variable.
* gnu: Add ruby-text.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/ruby.scm (ruby-text): New variable.
* gnu: Add ruby-locale.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/ruby.scm (ruby-locale): New variable.
* gnu: Add ruby-power-assert.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/ruby.scm (ruby-power-assert): New variable.
* gnu: bless: Build only for x86_64.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/bioinformatics.scm (bless): Add supported-systems field.
* gnu: htseq: Propagate numpy.Ricardo Wurmus2015-11-20
| | | | | | * gnu/packages/bioinformatics.scm (htseq)[inputs]: Move python2-numpy from here ... [propagated-inputs]: ... to here.
* gnu: ant: Update to 1.9.6.Ricardo Wurmus2015-11-20
| | | | * gnu/packages/java.scm (ant): Update to 1.9.6.
* gnu: guix: Update development snapshot to 5c36edc.Ludovic Courtès2015-11-19
| | | | * gnu/packages/package-management.scm (guix-devel): Update to 5c36edc.
* doc: Mention fonts for Asian languages.Ludovic Courtès2015-11-19
| | | | | | | Suggested by Alex Vong <alexvong1995@gmail.com>. * doc/guix.texi (Application Setup): Explain how to install X11 fonts for Asian languages.
* doc: Update documentation of the 'services' field.Ludovic Courtès2015-11-19
| | | | | * doc/guix.texi (operating-system Reference): The 'services' field now contains a list of service objects.
* gnu: jack-2: Fix jack_control script.Ricardo Wurmus2015-11-19
| | | | | | * gnu/packages/audio.scm (jack-2)[inputs]: Add python2-dbus. [arguments]: Use python-2 and add build phase to wrap jack_control Python script.
* services: Add udev-rule procedure.Ricardo Wurmus2015-11-19
| | | | | * gnu/services/base.scm (udev-rule): New procedure. (kvm-udev-rule): Rewrite as variable in terms of udev-rule.
* gnu: ghc-unordered-containers: Enable tests.Eric Bavier2015-11-19
| | | | | | | * gnu/packages/haskell.scm (ghc-unordered-containers) [arguments]: Remove. [inputs]: Add ghc-chasingbottoms, ghc-test-framework, ghc-test-framework-hunit, and ghc-test-framework-quickcheck2.
* gnu: Add ghc-chasingbottoms.Eric Bavier2015-11-19
| | | | * gnu/packages/haskell.scm (ghc-chasingbottoms): New variable.
* gnu: ghc-attoparsec: Enable tests.Eric Bavier2015-11-19
| | | | | | * gnu/packages/haskell.scm (ghc-attoparsec)[arguments]: Remove. [inputs]: Add ghc-quickcheck, ghc-quickcheck-unicode, ghc-test-framework, and ghc-test-framework-quickcheck2.
* gnu: Add ghc-test-framework-quickcheck2.Eric Bavier2015-11-19
| | | | | * gnu/packages/haskell.scm (ghc-test-framework-quickcheck2): New variable.
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