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-rw-r--r--gnu/packages/bioinformatics.scm18
1 files changed, 2 insertions, 16 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 017f233cba..0ba09107de 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2399,7 +2399,7 @@ simultaneously.")
(define-public ncbi-vdb
(package
(name "ncbi-vdb")
- (version "2.4.5-5")
+ (version "2.5.4")
(source
(origin
(method url-fetch)
@@ -2409,7 +2409,7 @@ simultaneously.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "1cj8nk6if8sqagv20vx36v566fdvhcaadf0x1ycnbgql6chbs6vy"))))
+ "1rcnyc4xkdfcjww2i0s0qrbapys0cxbjcx2sy3qkpslf9f400fgj"))))
(build-system gnu-build-system)
(arguments
`(#:parallel-build? #f ; not supported
@@ -2419,20 +2419,6 @@ simultaneously.")
'configure
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
- ;; Only replace the version suffix, not the version number in the
- ;; directory name; fixed in commit 4dbba5c6a809 (no release yet).
- (substitute* "setup/konfigure.perl"
- (((string-append "\\$\\(subst "
- "(\\$\\(VERSION[^\\)]*\\)),"
- "(\\$\\([^\\)]+\\)),"
- "(\\$\\([^\\)]+\\)|\\$\\@)"
- "\\)")
- _ pattern replacement target)
- (string-append "$(patsubst "
- "%" pattern ","
- "%" replacement ","
- target ")")))
-
;; Override include path for libmagic
(substitute* "setup/package.prl"
(("name => 'magic', Include => '/usr/include'")