diff options
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 9 |
1 files changed, 6 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 03054c91d1..5b3eec86db 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -3292,7 +3292,7 @@ experiments and provide highly stable thresholds based on reproducibility.") (define-public jellyfish (package (name "jellyfish") - (version "2.2.4") + (version "2.2.7") (source (origin (method url-fetch) (uri (string-append "https://github.com/gmarcais/Jellyfish/" @@ -3300,7 +3300,7 @@ experiments and provide highly stable thresholds based on reproducibility.") "/jellyfish-" version ".tar.gz")) (sha256 (base32 - "0a6xnynqy2ibfbfz86b9g2m2dgm7f1469pmymkpam333gi3p26nk")))) + "1a1iwq9pq54k2m9ypvwl5s0bqfl64gwh9dx5af9i382ajas2016q")))) (build-system gnu-build-system) (outputs '("out" ;for library "ruby" ;for Ruby bindings @@ -3323,7 +3323,10 @@ experiments and provide highly stable thresholds based on reproducibility.") `(("bc" ,bc) ("time" ,time) ("ruby" ,ruby) - ("python" ,python-2))) + ("python" ,python-2) + ("pkg-config" ,pkg-config))) + (inputs + `(("htslib" ,htslib))) (synopsis "Tool for fast counting of k-mers in DNA") (description "Jellyfish is a tool for fast, memory-efficient counting of k-mers in |