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-rw-r--r--gnu/local.mk2
-rw-r--r--gnu/packages/audio.scm8
-rw-r--r--gnu/packages/backup.scm15
-rw-r--r--gnu/packages/build-tools.scm4
-rw-r--r--gnu/packages/databases.scm125
-rw-r--r--gnu/packages/freedesktop.scm8
-rw-r--r--gnu/packages/gl.scm4
-rw-r--r--gnu/packages/gnome.scm4
-rw-r--r--gnu/packages/gstreamer.scm44
-rw-r--r--gnu/packages/java.scm5
-rw-r--r--gnu/packages/llvm.scm9
-rw-r--r--gnu/packages/maths.scm29
-rw-r--r--gnu/packages/patches/meson-for-build-rpath.patch33
-rw-r--r--gnu/packages/patches/openblas-fix-tests-i686.patch35
-rw-r--r--gnu/packages/patches/pulseaudio-glibc-2.27.patch67
-rw-r--r--gnu/packages/pciutils.scm4
-rw-r--r--gnu/packages/pdf.scm14
-rw-r--r--gnu/packages/pulseaudio.scm34
-rw-r--r--gnu/packages/python.scm6
-rw-r--r--gnu/packages/video.scm4
-rw-r--r--gnu/packages/web.scm4
-rw-r--r--gnu/packages/xorg.scm8
22 files changed, 216 insertions, 250 deletions
diff --git a/gnu/local.mk b/gnu/local.mk
index 20b213c5fb..9ae23d1a23 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -984,7 +984,6 @@ dist_patch_DATA = \
%D%/packages/patches/ola-readdir-r.patch \
%D%/packages/patches/openbabel-fix-crash-on-nwchem-output.patch \
%D%/packages/patches/opencascade-oce-glibc-2.26.patch \
- %D%/packages/patches/openblas-fix-tests-i686.patch \
%D%/packages/patches/openexr-missing-samples.patch \
%D%/packages/patches/openfoam-4.1-cleanup.patch \
%D%/packages/patches/openldap-CVE-2017-9287.patch \
@@ -1048,7 +1047,6 @@ dist_patch_DATA = \
%D%/packages/patches/psm-ldflags.patch \
%D%/packages/patches/psm-repro.patch \
%D%/packages/patches/pulseaudio-fix-mult-test.patch \
- %D%/packages/patches/pulseaudio-glibc-2.27.patch \
%D%/packages/patches/pulseaudio-longer-test-timeout.patch \
%D%/packages/patches/pybugz-encode-error.patch \
%D%/packages/patches/pybugz-stty.patch \
diff --git a/gnu/packages/audio.scm b/gnu/packages/audio.scm
index 58d67f2ebb..89f2275ebe 100644
--- a/gnu/packages/audio.scm
+++ b/gnu/packages/audio.scm
@@ -1393,6 +1393,14 @@ especially for creating reverb effects. It supports impulse responses with 1,
(base32
"0i6l25dmfk2ji2lrakqq9icnwjxklgcjzzk65dmsff91z2zva5rm"))))
(build-system gnu-build-system)
+ (arguments
+ `(#:phases (modify-phases %standard-phases
+ (add-after 'unpack 'patch-configure
+ (lambda _
+ (substitute* "configure"
+ ;; Install to <out/lib> regardless of platform.
+ (("libnn=lib64") "libnn=lib"))
+ #t)))))
(inputs
`(("alsa-lib" ,alsa-lib)
("readline" ,readline)))
diff --git a/gnu/packages/backup.scm b/gnu/packages/backup.scm
index 9884f58fc3..74ee67c70c 100644
--- a/gnu/packages/backup.scm
+++ b/gnu/packages/backup.scm
@@ -485,8 +485,21 @@ detection, and lossless compression.")
(modules '((guix build utils)))
(snippet
'(begin
+ ;; Delete files generated by Cython. We used to have a regex
+ ;; that created the list of generated files but Borg has
+ ;; added new non-generated C files that cause the regex to
+ ;; generate the wrong list.
(for-each delete-file
- (find-files "borg" "^(c|h|p).*\\.c$"))
+ '("src/borg/algorithms/checksums.c"
+ "src/borg/chunker.c"
+ "src/borg/compress.c"
+ "src/borg/crypto/low_level.c"
+ "src/borg/hashindex.c"
+ "src/borg/item.c"
+ "src/borg/platform/darwin.c"
+ "src/borg/platform/freebsd.c"
+ "src/borg/platform/linux.c"
+ "src/borg/platform/posix.c"))
;; Remove bundled shared libraries.
(with-directory-excursion "src/borg/algorithms"
(for-each delete-file-recursively
diff --git a/gnu/packages/build-tools.scm b/gnu/packages/build-tools.scm
index e693aec4ac..24870c82d6 100644
--- a/gnu/packages/build-tools.scm
+++ b/gnu/packages/build-tools.scm
@@ -100,7 +100,7 @@ generate such a compilation database.")
(define-public meson
(package
(name "meson")
- (version "0.46.1")
+ (version "0.47.1")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/mesonbuild/meson/"
@@ -108,7 +108,7 @@ generate such a compilation database.")
version ".tar.gz"))
(sha256
(base32
- "0y7f5hhy16q99l7x06x8sid9p9dbg6d7i60zs7c07cz5ww1plj8r"))))
+ "19mdap2ncvczajx220bd73xmwhd8x906382y18cn9c5syxwxwwyn"))))
(build-system python-build-system)
(arguments
`(;; FIXME: Tests require many additional inputs, a fix for the RUNPATH
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm
index 7b056eb13b..4c9382ce6d 100644
--- a/gnu/packages/databases.scm
+++ b/gnu/packages/databases.scm
@@ -627,7 +627,7 @@ Language.")
(define-public mariadb
(package
(name "mariadb")
- (version "10.1.33")
+ (version "10.1.34")
(source (origin
(method url-fetch)
(uri (string-append "https://downloads.mariadb.org/f/"
@@ -635,7 +635,21 @@ Language.")
name "-" version ".tar.gz"))
(sha256
(base32
- "0bax748j4srsyhw5cs5jvwigndh0zwmf4r2cjvhja31ckx8jqccl"))))
+ "0j2mdpyvj41vkq2rwrzky88b7170hzz6gy2vb2bc1447s2gp3q67"))
+ (patches (search-patches "mariadb-gcc-ice.patch"))
+ (modules '((guix build utils)))
+ (snippet
+ '(begin
+ ;; Delete bundled snappy and xz.
+ (delete-file-recursively "storage/tokudb/PerconaFT/third_party")
+
+ ;; Preserve CMakeLists.txt for these.
+ (for-each (lambda (file)
+ (unless (string-suffix? "CMakeLists.txt" file)
+ (delete-file file)))
+ (append (find-files "extra/yassl")
+ (find-files "pcre") (find-files "zlib")))
+ #t))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags
@@ -649,6 +663,12 @@ Language.")
;; For now, disable the features that that use libarchive (xtrabackup).
"-DWITH_LIBARCHIVE=OFF"
+ ;; Ensure the system libraries are used.
+ "-DWITH_JEMALLOC=yes"
+ "-DWITH_PCRE=system"
+ "-DWITH_SSL=system"
+ "-DWITH_ZLIB=system"
+
"-DDEFAULT_CHARSET=utf8"
"-DDEFAULT_COLLATION=utf8_general_ci"
"-DMYSQL_DATADIR=/var/lib/mysql"
@@ -662,26 +682,73 @@ Language.")
"-DINSTALL_SUPPORTFILESDIR=share/mysql/support-files"
"-DINSTALL_MYSQLSHAREDIR=share/mysql"
"-DINSTALL_DOCDIR=share/mysql/docs"
- "-DINSTALL_SHAREDIR=share/mysql")
+ "-DINSTALL_SHAREDIR=share")
#:phases
(modify-phases %standard-phases
+ (add-after 'unpack 'unbundle
+ (lambda _
+ ;; The bundled PCRE in MariaDB has a patch that was upstreamed
+ ;; in version 8.34. Unfortunately the upstream patch behaves
+ ;; slightly differently and the build system fails to detect it.
+ ;; See <https://bugs.exim.org/show_bug.cgi?id=2173>.
+ ;; XXX: Consider patching PCRE instead.
+ (substitute* "cmake/pcre.cmake"
+ ((" OR NOT PCRE_STACK_SIZE_OK") ""))
+
+ (substitute* "storage/tokudb/PerconaFT/ft/CMakeLists.txt"
+ ;; Remove dependency on these CMake targets.
+ ((" build_lzma build_snappy") ""))
+
+ (substitute* "storage/tokudb/PerconaFT/CMakeLists.txt"
+ ;; This file checks that the bundled sources are present and
+ ;; declares build procedures for them. We don't need that.
+ (("^include\\(TokuThirdParty\\)") ""))
- ;; Apply this patch that's only needed on ARM.
- ,@(if (and (not (%current-target-system))
- (string=? "armhf-linux" (%current-system)))
- `((add-after 'unpack 'apply-patch
- (lambda* (#:key inputs #:allow-other-keys)
- (let ((patch (assoc-ref inputs "gcc-ice-patch")))
- (invoke "patch" "-p1" "--force"
- "--input" patch)
- #t))))
- '())
-
- (add-before
- 'configure 'pre-configure
- (lambda _
- (setenv "CONFIG_SHELL" (which "sh"))
- #t))
+ #t))
+ (add-after 'unpack 'adjust-tests
+ (lambda _
+ (let ((disabled-tests
+ '(;; These fail because root@hostname == root@localhost in
+ ;; the build environment, causing a user count mismatch.
+ ;; See <https://jira.mariadb.org/browse/MDEV-7761>.
+ "main.join_cache"
+ "main.explain_non_select"
+ "roles.acl_statistics"))
+
+ ;; This file contains a list of known-flaky tests for this
+ ;; release. Append our own items.
+ (unstable-tests (open-file "mysql-test/unstable-tests" "a")))
+ (for-each (lambda (test)
+ (format unstable-tests "~a : ~a\n"
+ test "Disabled in Guix"))
+ disabled-tests)
+ (close-port unstable-tests)
+
+ (substitute* "mysql-test/mysql-test-run.pl"
+ (("/bin/ls") (which "ls"))
+ (("/bin/sh") (which "sh")))
+ #t)))
+ (add-before 'configure 'disable-plugins
+ (lambda _
+ (let ((disable-plugin (lambda (name)
+ (call-with-output-file
+ (string-append "plugin/" name
+ "/CMakeLists.txt")
+ (lambda (port)
+ (format port "\n")))))
+ (disabled-plugins '(;; XXX: Causes a test failure.
+ "disks")))
+ (for-each disable-plugin disabled-plugins)
+ #t)))
+ (replace 'check
+ (lambda* (#:key (tests? #t) #:allow-other-keys)
+ (if tests?
+ (with-directory-excursion "mysql-test"
+ (invoke "./mtr" "--verbose"
+ "--parallel" (number->string (parallel-job-count))
+ "--skip-test-list=unstable-tests"))
+ (format #t "test suite not run~%"))
+ #t))
(add-after
'install 'post-install
(lambda* (#:key outputs #:allow-other-keys)
@@ -694,14 +761,15 @@ Language.")
(with-directory-excursion out
(for-each delete-file-recursively
'("data" "mysql-test" "sql-bench"
- "share/man/man1/mysql-test-run.pl.1")))
+ "share/man/man1/mysql-test-run.pl.1"))
+ ;; Delete huge mysqltest executables.
+ (for-each delete-file (find-files "bin" "test"))
+ ;; And static libraries.
+ (for-each delete-file (find-files "lib" "\\.a$")))
#t))))))
(native-inputs
`(("bison" ,bison)
- ("perl" ,perl)
- ,@(if (string=? "armhf-linux" (%current-system))
- `(("gcc-ice-patch" ,(search-patch "mariadb-gcc-ice.patch")))
- '())))
+ ("perl" ,perl)))
(inputs
`(("jemalloc" ,jemalloc)
("libaio" ,libaio)
@@ -709,7 +777,12 @@ Language.")
("ncurses" ,ncurses)
("openssl" ,openssl)
("pcre" ,pcre)
+ ("snappy" ,snappy)
+ ("xz" ,xz)
("zlib" ,zlib)))
+ ;; The test suite is very resource intensive and can take more than three
+ ;; hours on a x86_64 system. Give slow and busy machines some leeway.
+ (properties '((timeout . 64800))) ;18 hours
(home-page "https://mariadb.org/")
(synopsis "SQL database server")
(description
@@ -1456,7 +1529,7 @@ valid SQL query.")
(define-public unixodbc
(package
(name "unixodbc")
- (version "2.3.4")
+ (version "2.3.6")
(source (origin
(method url-fetch)
(uri
@@ -1464,7 +1537,7 @@ valid SQL query.")
"ftp://ftp.unixodbc.org/pub/unixODBC/unixODBC-"
version ".tar.gz"))
(sha256
- (base32 "0f8y88rcc2akjvjv5y66yx7k0ms9h1s0vbcfy25j93didflhj59f"))))
+ (base32 "0sads5b8cmmj526gyjba7ccknl1vbhkslfqshv1yqln08zv3gdl8"))))
(build-system gnu-build-system)
(synopsis "Data source abstraction library")
(description "Unixodbc is a library providing an API with which to access
diff --git a/gnu/packages/freedesktop.scm b/gnu/packages/freedesktop.scm
index 2d9b3d7ca8..cb0916621a 100644
--- a/gnu/packages/freedesktop.scm
+++ b/gnu/packages/freedesktop.scm
@@ -147,14 +147,14 @@ freedesktop.org project.")
(define-public libinput
(package
(name "libinput")
- (version "1.11.1")
+ (version "1.11.3")
(source (origin
(method url-fetch)
(uri (string-append "https://freedesktop.org/software/libinput/"
name "-" version ".tar.xz"))
(sha256
(base32
- "1z7i8vk0i61npkdqwsk85wp9v4yjlvylqnyydikjqnbsrjp9abk4"))))
+ "01nb1shnl871d939wgfd7nc9svclcnfjfhlq64b4yns2dvcr24gk"))))
(build-system meson-build-system)
(arguments
`(#:configure-flags '("-Ddocumentation=false")))
@@ -474,7 +474,7 @@ applications, X servers (rootless or fullscreen) or other display servers.")
(define-public wayland-protocols
(package
(name "wayland-protocols")
- (version "1.14")
+ (version "1.15")
(source (origin
(method url-fetch)
(uri (string-append
@@ -482,7 +482,7 @@ applications, X servers (rootless or fullscreen) or other display servers.")
"wayland-protocols-" version ".tar.xz"))
(sha256
(base32
- "1xknjcfhqvdi1s4iq4kk1q61fg2rar3g8q4vlqarpd324imqjj4n"))))
+ "1qlyf9cllr2p339xxplznh023qcwj5iisp02ikx7ps349dx75fys"))))
(build-system gnu-build-system)
(inputs
`(("wayland" ,wayland)))
diff --git a/gnu/packages/gl.scm b/gnu/packages/gl.scm
index bde6e55607..28e283640d 100644
--- a/gnu/packages/gl.scm
+++ b/gnu/packages/gl.scm
@@ -224,7 +224,7 @@ also known as DXTn or DXTC) for Mesa.")
(define-public mesa
(package
(name "mesa")
- (version "18.1.2")
+ (version "18.1.5")
(source
(origin
(method url-fetch)
@@ -236,7 +236,7 @@ also known as DXTn or DXTC) for Mesa.")
version "/mesa-" version ".tar.xz")))
(sha256
(base32
- "1ydivzm4c2k53b65lvm11d62z140xlmd7viw63bl5cm5idjg02q7"))
+ "1sldv7l3g6jfx0yn16kvxlik1qiy037lypdqpvsqc0v6lvqydnv9"))
(patches
(search-patches "mesa-skip-disk-cache-test.patch"))))
(build-system gnu-build-system)
diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm
index b1a0ccdc12..46eae3608a 100644
--- a/gnu/packages/gnome.scm
+++ b/gnu/packages/gnome.scm
@@ -1176,7 +1176,7 @@ XML/CSS rendering engine.")
(define-public libgsf
(package
(name "libgsf")
- (version "1.14.42")
+ (version "1.14.43")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnome/sources/" name "/"
@@ -1184,7 +1184,7 @@ XML/CSS rendering engine.")
name "-" version ".tar.xz"))
(sha256
(base32
- "1hhdz0ymda26q6bl5ygickkgrh998lxqq4z9i8dzpcvqna3zpzr9"))))
+ "05pf3h0dha3s20ddsrljbx7m94qyiqs5igwxx1ql0vlsdlylx50j"))))
(build-system gnu-build-system)
(native-inputs
`(("intltool" ,intltool)
diff --git a/gnu/packages/gstreamer.scm b/gnu/packages/gstreamer.scm
index 951ca93fbf..63d18fce5c 100644
--- a/gnu/packages/gstreamer.scm
+++ b/gnu/packages/gstreamer.scm
@@ -102,7 +102,7 @@ arrays of data.")
(define-public gstreamer
(package
(name "gstreamer")
- (version "1.14.1")
+ (version "1.14.2")
(source
(origin
(method url-fetch)
@@ -111,7 +111,7 @@ arrays of data.")
version ".tar.xz"))
(sha256
(base32
- "0v0qqfj6klkirhbcxwgw1sq6x67456ckjadlhnzsji0m4q6jpn18"))))
+ "029fi3v0vrravysgfwhfkrb3ndg64sjmigbb0iwr7wpkk5r15mjb"))))
(build-system gnu-build-system)
(outputs '("out" "doc"))
(arguments
@@ -150,7 +150,7 @@ This package provides the core library and elements.")
(define-public gst-plugins-base
(package
(name "gst-plugins-base")
- (version "1.14.1")
+ (version "1.14.2")
(source
(origin
(method url-fetch)
@@ -158,7 +158,7 @@ This package provides the core library and elements.")
name "-" version ".tar.xz"))
(sha256
(base32
- "1d8d1gfd4jnymyhb0f1pxdhapsx4v1nilk03bndmv0id131wf9hh"))))
+ "0z0wy0p0nxxqhsis3n517d6ykldm02g7rca9fhq9kxb9m05yidx4"))))
(build-system gnu-build-system)
(outputs '("out" "doc"))
(propagated-inputs
@@ -205,7 +205,7 @@ for the GStreamer multimedia library.")
(define-public gst-plugins-good
(package
(name "gst-plugins-good")
- (version "1.14.1")
+ (version "1.14.2")
(source
(origin
(method url-fetch)
@@ -214,7 +214,7 @@ for the GStreamer multimedia library.")
name "-" version ".tar.xz"))
(sha256
(base32
- "0wlim4kapb2vc11fcjdlx31zn5ja3xw3kq1jflvk4sknvcnhdv1l"))))
+ "1bfa4n6xhr4v4wga8pv1y00rm1aka498snw6kgszy2w624l5wmy0"))))
(build-system gnu-build-system)
(inputs
`(("aalib" ,aalib)
@@ -264,14 +264,14 @@ developers consider to have good quality code and correct functionality.")
(define-public gst-plugins-bad
(package
(name "gst-plugins-bad")
- (version "1.14.1")
+ (version "1.14.2")
(source (origin
(method url-fetch)
(uri (string-append "https://gstreamer.freedesktop.org/src/"
name "/" name "-" version ".tar.xz"))
(sha256
(base32
- "06nn43f65mr872apljfiq8jnmwa8r7z26n1frprgvaijh28ccxra"))))
+ "1bqy3dn7q4kdkd4lqznyly8fv854d0hhncv88jk6ai4rf3dbgyil"))))
(outputs '("out" "doc"))
(build-system gnu-build-system)
(arguments
@@ -340,7 +340,7 @@ par compared to the rest.")
(define-public gst-plugins-ugly
(package
(name "gst-plugins-ugly")
- (version "1.14.1")
+ (version "1.14.2")
(source
(origin
(method url-fetch)
@@ -348,7 +348,7 @@ par compared to the rest.")
name "/" name "-" version ".tar.xz"))
(sha256
(base32
- "1lz1kx9h5mlp9ahmgavv99nkg6j0rrjks2ws820yym1zn45l7wng"))))
+ "0s9xrz8knfv06fj1nbv3iq4xj7dj4cnzj3xvgb7zs89rv7crgq2m"))))
(build-system gnu-build-system)
(inputs
`(("gst-plugins-base" ,gst-plugins-base)
@@ -378,7 +378,7 @@ distribution problems in some jurisdictions, e.g. due to patent threats.")
(define-public gst-libav
(package
(name "gst-libav")
- (version "1.14.1")
+ (version "1.14.2")
(source (origin
(method url-fetch)
(uri (string-append
@@ -386,18 +386,16 @@ distribution problems in some jurisdictions, e.g. due to patent threats.")
name "-" version ".tar.xz"))
(sha256
(base32
- "1782crqgl1bqlkr67s0qmb3ihcjdjpljd6kynqs9zyzjs810my7g"))))
+ "1pknqpjxq1l3vlprdsmxxwk0lwqa555fqd543k9vphngqlwiqdca"))
+ (modules '((guix build utils)))
+ (snippet
+ '(begin
+ ;; Drop bundled ffmpeg.
+ (delete-file-recursively "gst-libs/ext/libav")
+ #t))))
(build-system gnu-build-system)
(arguments
- '(#:configure-flags '("--with-system-libav")
- #:phases
- (modify-phases %standard-phases
- (add-before 'configure 'patch-/bin/sh
- (lambda _
- (substitute* "gst-libs/ext/libav/configure"
- (("#! /bin/sh")
- (string-append "#! "(which "sh"))))
- #t)))))
+ '(#:configure-flags '("--with-system-libav")))
(native-inputs
`(("pkg-config" ,pkg-config)
("python" ,python)))
@@ -416,7 +414,7 @@ compression formats through the use of the libav library.")
(define-public python-gst
(package
(name "python-gst")
- (version "1.14.1")
+ (version "1.14.2")
(source (origin
(method url-fetch)
(uri (string-append
@@ -424,7 +422,7 @@ compression formats through the use of the libav library.")
"gst-python-" version ".tar.xz"))
(sha256
(base32
- "1ls7j5iy7irinf7d7nm6r4qw3d1ddpr8fm4k5n6zfhz3am4p1ihv"))))
+ "08nb011acyvlz48fqh8c084k0dlssz9b7wha7zzk797inidbwh6w"))))
(build-system gnu-build-system)
(arguments
;; XXX: Factorize python-sitedir with python-build-system.
diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm
index 0ff92c763d..d2f4c9d05b 100644
--- a/gnu/packages/java.scm
+++ b/gnu/packages/java.scm
@@ -1672,7 +1672,7 @@ new Date();"))
'("jdk" "openjdk-src" "corba-drop" "jaxp-drop" "jaxws-drop"
"jdk-drop" "langtools-drop" "hotspot-drop")))))))
-(define-public icedtea icedtea-7)
+(define-public icedtea icedtea-8)
(define-public ant/java8
@@ -3679,7 +3679,8 @@ on the XPP3 API (XML Pull Parser).")))
"115l5pqblirdkmzi32dxx7gbcm4jy0s14y5wircr6h8jdr9aix00"))))
(build-system ant-build-system)
(propagated-inputs
- `(("java-aqute-bndlib" ,java-aqute-bndlib)))
+ `(("java-aqute-bndlib" ,java-aqute-bndlib)
+ ("java-aqute-libg" ,java-aqute-libg)))
(arguments
`(#:build-target "compile"
;; The tests require an old version of Janino, which no longer compiles
diff --git a/gnu/packages/llvm.scm b/gnu/packages/llvm.scm
index 98592ad090..add7f1b40c 100644
--- a/gnu/packages/llvm.scm
+++ b/gnu/packages/llvm.scm
@@ -6,6 +6,7 @@
;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017 Roel Janssen <roel@gnu.org>
;;; Copyright © 2018 Marius Bakke <mbakke@fastmail.com>
+;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -41,7 +42,7 @@
(define-public llvm
(package
(name "llvm")
- (version "6.0.0")
+ (version "6.0.1")
(source
(origin
(method url-fetch)
@@ -49,7 +50,7 @@
version "/llvm-" version ".src.tar.xz"))
(sha256
(base32
- "0224xvfg6h40y5lrbnb9qaq3grmdc5rg00xq03s1wxjfbf8krx8z"))))
+ "1qpls3vk85lydi5b4axl0809fv932qgsqgdgrk098567z4jc7mmn"))))
(build-system cmake-build-system)
(native-inputs
`(("python" ,python-2) ;bytes->str conversion in clang>=3.7 needs python-2
@@ -243,11 +244,11 @@ code analysis tools.")
(define-public clang-runtime
(clang-runtime-from-llvm
llvm
- "16m7rvh3w6vq10iwkjrr1nn293djld3xm62l5zasisaprx117k6h"))
+ "1fcr3jn24yr8lh36nc0c4ikli4744i2q9m1ik67p1jymwwaixkgl"))
(define-public clang
(clang-from-llvm llvm clang-runtime
- "0cnznvfyl3hgbg8gj58pmwf0pvd2sv5k3ccbivy6q6ggv7c6szg0"
+ "0rxn4rh7rrnsqbdgp4gzc8ishbkryhpl1kd3mpnxzpxxhla3y93w"
#:patches '("clang-6.0-libc-search-path.patch")))
(define-public llvm-3.9.1
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index f07c83dc0d..50de120e07 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -276,22 +276,20 @@ enough to be used effectively as a scientific calculator.")
(define-public double-conversion
(package
(name "double-conversion")
- (version "1.1.5")
+ (version "3.0.0")
+ (home-page "https://github.com/google/double-conversion")
(source (origin
(method url-fetch)
- (uri (string-append
- "https://github.com/floitsch/double-conversion/archive/v"
- version ".tar.gz"))
+ (uri (string-append home-page "/archive/v" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "0cnr8xhyjfxijay8ymkqcph3672wp2lj23qhdmr3m4kia5kpdf83"))))
+ "059r1czs28ljjd388pn6l3njg1ghbf1cv3q9nkxv3dj2a8siabqm"))))
(build-system cmake-build-system)
(arguments
'(#:test-target "test"
#:configure-flags '("-DBUILD_SHARED_LIBS=ON"
"-DBUILD_TESTING=ON")))
- (home-page "https://github.com/floitsch/double-conversion")
(synopsis "Conversion routines for IEEE doubles")
(description
"The double-conversion library provides binary-decimal and decimal-binary
@@ -2830,7 +2828,7 @@ parts of it.")
(define-public openblas
(package
(name "openblas")
- (version "0.3.0")
+ (version "0.3.2")
(source
(origin
(method url-fetch)
@@ -2839,7 +2837,7 @@ parts of it.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "14a9vyvp2k5zpd0axbnqk0d3khc1v3cck10nb5fj7d2sgn8490ky"))))
+ "0b20km2jv7m6qiylrlvhq2vnmkmilb633mr8rhqmgbn1wqrp58jq"))))
(build-system gnu-build-system)
(arguments
`(#:test-target "test"
@@ -2878,16 +2876,6 @@ parts of it.")
#:phases
(modify-phases %standard-phases
(delete 'configure)
- ;; Conditionally apply a patch on i686 to avoid rebuilding
- ;; all architectures. FIXME: This should be moved to the
- ;; (source (patches ...)) field in the next rebuild cycle.
- ,@(if (string-prefix? "i686" (or (%current-target-system)
- (%current-system)))
- `((add-after 'unpack 'fix-tests
- (lambda* (#:key inputs #:allow-other-keys)
- (invoke "patch" "-p1"
- "--input" (assoc-ref inputs "i686-fix-tests.patch")))))
- '())
(add-before 'build 'set-extralib
(lambda* (#:key inputs #:allow-other-keys)
;; Get libgfortran found when building in utest.
@@ -2899,11 +2887,6 @@ parts of it.")
`(("fortran-lib" ,gfortran "lib")))
(native-inputs
`(("cunit" ,cunit)
- ,@(if (string-prefix? "i686" (or (%current-target-system)
- (%current-system)))
- `(("i686-fix-tests.patch"
- ,(search-patch "openblas-fix-tests-i686.patch")))
- '())
("fortran" ,gfortran)
("perl" ,perl)))
(home-page "http://www.openblas.net/")
diff --git a/gnu/packages/patches/meson-for-build-rpath.patch b/gnu/packages/patches/meson-for-build-rpath.patch
index 2151d53565..59249e294d 100644
--- a/gnu/packages/patches/meson-for-build-rpath.patch
+++ b/gnu/packages/patches/meson-for-build-rpath.patch
@@ -4,20 +4,21 @@ meson-build-system.
Patch by Peter Mikkelsen <petermikkelsen10@gmail.com>
---- meson-0.42.0/mesonbuild/scripts/meson_install.py.orig 2017-09-09 01:49:39.147374148 +0200
-+++ meson-0.42.0/mesonbuild/scripts/meson_install.py 2017-09-09 01:51:01.209134717 +0200
-@@ -391,14 +391,6 @@
- print("Symlink creation does not work on this platform. "
- "Skipping all symlinking.")
- printed_symlink_error = True
-- if os.path.isfile(outname):
-- try:
-- depfixer.fix_rpath(outname, install_rpath, False)
-- except SystemExit as e:
-- if isinstance(e.code, int) and e.code == 0:
-- pass
-- else:
-- raise
-
+--- meson-0.42.0/mesonbuild/minstall.py.orig 2017-09-09 01:49:39.147374148 +0200
++++ meson-0.42.0/mesonbuild/minstall.py 2017-09-09 01:51:01.209134717 +0200
+@@ -436,15 +436,6 @@
+ print("Symlink creation does not work on this platform. "
+ "Skipping all symlinking.")
+ printed_symlink_error = True
+- if os.path.isfile(outname):
+- try:
+- depfixer.fix_rpath(outname, install_rpath, final_path,
+- install_name_mappings, verbose=False)
+- except SystemExit as e:
+- if isinstance(e.code, int) and e.code == 0:
+- pass
+- else:
+- raise
+
def run(args):
- global install_log_file
+ parser = buildparser()
diff --git a/gnu/packages/patches/openblas-fix-tests-i686.patch b/gnu/packages/patches/openblas-fix-tests-i686.patch
deleted file mode 100644
index 3325546ea3..0000000000
--- a/gnu/packages/patches/openblas-fix-tests-i686.patch
+++ /dev/null
@@ -1,35 +0,0 @@
-Fix a test failure on some i686 systems:
-
-https://github.com/xianyi/OpenBLAS/issues/1575
-
-This patch is a squashed version of these commits:
-
-https://github.com/xianyi/OpenBLAS/pull/1583
-
-diff --git a/kernel/x86/KERNEL.NEHALEM b/kernel/x86/KERNEL.NEHALEM
-index 835520ef..65b03ae5 100644
---- a/kernel/x86/KERNEL.NEHALEM
-+++ b/kernel/x86/KERNEL.NEHALEM
-@@ -1,3 +1 @@
- include $(KERNELDIR)/KERNEL.PENRYN
--SSWAPKERNEL = ../arm/swap.c
--DSWAPKERNEL = ../arm/swap.c
-diff --git a/kernel/x86/swap.S b/kernel/x86/swap.S
-index 54b00b33..e30c2789 100644
---- a/kernel/x86/swap.S
-+++ b/kernel/x86/swap.S
-@@ -138,6 +138,14 @@
- /* INCX != 1 or INCY != 1 */
-
- .L14:
-+ cmpl $0, %ebx
-+ jne .L141
-+ cmpl $0, %ecx
-+ jne .L141
-+/* INCX == 0 and INCY == 0 */
-+ jmp .L27
-+
-+.L141:
- movl %edx, %eax
- sarl $2, %eax
- jle .L28
diff --git a/gnu/packages/patches/pulseaudio-glibc-2.27.patch b/gnu/packages/patches/pulseaudio-glibc-2.27.patch
deleted file mode 100644
index 79d86abeee..0000000000
--- a/gnu/packages/patches/pulseaudio-glibc-2.27.patch
+++ /dev/null
@@ -1,67 +0,0 @@
-Copied from:
-https://cgit.freedesktop.org/pulseaudio/pulseaudio/commit/?id=dfb0460fb4743aec047cdf755a660a9ac2d0f3fb
-
-
-From dfb0460fb4743aec047cdf755a660a9ac2d0f3fb Mon Sep 17 00:00:00 2001
-From: Tanu Kaskinen <tanuk@iki.fi>
-Date: Wed, 24 Jan 2018 03:51:49 +0200
-Subject: [PATCH] memfd-wrappers: only define memfd_create() if not already
- defined
-
-glibc 2.27 is to be released soon, and it will provide memfd_create().
-If glibc provides the function, we must not define it ourselves,
-otherwise building fails due to conflict between the two implementations
-of the same function.
-
-BugLink: https://bugs.freedesktop.org/show_bug.cgi?id=104733
----
- configure.ac | 3 +++
- src/pulsecore/memfd-wrappers.h | 7 ++++---
- 2 files changed, 7 insertions(+), 3 deletions(-)
-
-diff --git a/configure.ac b/configure.ac
-index 0084c86e..0eb44b08 100644
---- a/configure.ac
-+++ b/configure.ac
-@@ -610,6 +610,9 @@ AS_IF([test "x$enable_memfd" = "xyes" && test "x$HAVE_MEMFD" = "x0"],
- [AC_MSG_ERROR([*** Your Linux kernel does not support memfd shared memory.
- *** Use linux v3.17 or higher for such a feature.])])
-
-+AS_IF([test "x$HAVE_MEMFD" = "x1"],
-+ AC_CHECK_FUNCS([memfd_create]))
-+
- AC_SUBST(HAVE_MEMFD)
- AM_CONDITIONAL([HAVE_MEMFD], [test "x$HAVE_MEMFD" = x1])
- AS_IF([test "x$HAVE_MEMFD" = "x1"], AC_DEFINE([HAVE_MEMFD], 1, [Have memfd shared memory.]))
-diff --git a/src/pulsecore/memfd-wrappers.h b/src/pulsecore/memfd-wrappers.h
-index 3bed9b2b..c7aadfd3 100644
---- a/src/pulsecore/memfd-wrappers.h
-+++ b/src/pulsecore/memfd-wrappers.h
-@@ -20,13 +20,14 @@
- License along with PulseAudio; if not, see <http://www.gnu.org/licenses/>.
- ***/
-
--#ifdef HAVE_MEMFD
-+#if defined(HAVE_MEMFD) && !defined(HAVE_MEMFD_CREATE)
-
- #include <sys/syscall.h>
- #include <fcntl.h>
-
- /*
-- * No glibc wrappers exist for memfd_create(2), so provide our own.
-+ * Before glibc version 2.27 there was no wrapper for memfd_create(2),
-+ * so we have to provide our own.
- *
- * Also define memfd fcntl sealing macros. While they are already
- * defined in the kernel header file <linux/fcntl.h>, that file as
-@@ -63,6 +64,6 @@ static inline int memfd_create(const char *name, unsigned int flags) {
- #define F_SEAL_WRITE 0x0008 /* prevent writes */
- #endif
-
--#endif /* HAVE_MEMFD */
-+#endif /* HAVE_MEMFD && !HAVE_MEMFD_CREATE */
-
- #endif
---
-2.16.2
-
diff --git a/gnu/packages/pciutils.scm b/gnu/packages/pciutils.scm
index d972761586..d5369f3b6d 100644
--- a/gnu/packages/pciutils.scm
+++ b/gnu/packages/pciutils.scm
@@ -31,7 +31,7 @@
(define-public pciutils
(package
(name "pciutils")
- (version "3.5.6")
+ (version "3.6.1")
(source (origin
(method url-fetch)
(uri (string-append
@@ -39,7 +39,7 @@
version ".tar.xz"))
(sha256
(base32
- "08dvsk1b5m1r7qqzsm849h4glq67mngf8zw7bg0102ff1jwywipk"))))
+ "1q39hh8scgvqppk1clzjh7yiq5p2r0knv52g3qzmdhsir4f47h7w"))))
(build-system gnu-build-system)
(arguments
'(#:phases
diff --git a/gnu/packages/pdf.scm b/gnu/packages/pdf.scm
index 867333031c..03b311da14 100644
--- a/gnu/packages/pdf.scm
+++ b/gnu/packages/pdf.scm
@@ -644,14 +644,14 @@ line tools for batch rendering @command{pdfdraw}, rewriting files
(define-public qpdf
(package
(name "qpdf")
- (version "6.0.0")
+ (version "8.1.0")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/qpdf/qpdf/" version
"/qpdf-" version ".tar.gz"))
(sha256
(base32
- "0csj2p2gkxrc0rk8ykymlsdgfas96vzf1dip3y1x7z1q9plwgzd9"))
+ "1m3hcgip6bzjx4gd7wq1328p8zi3pq5savzncdyln6l0lcklh7vx"))
(modules '((guix build utils)))
(snippet
;; Replace shebang with the bi-lingual shell/Perl trick to remove
@@ -683,9 +683,9 @@ eval '(exit $?0)' && eval 'exec perl -wS \"$0\" ${1+\"$@\"}'
`(("pkg-config" ,pkg-config)
("perl" ,perl)))
(propagated-inputs
- `(("pcre" ,pcre)))
- (inputs
- `(("zlib" ,zlib)))
+ ;; In Requires.private of libqpdf.pc.
+ `(("libjpeg-turbo" ,libjpeg-turbo)
+ ("zlib" ,zlib)))
(synopsis "Command-line tools and library for transforming PDF files")
(description
"QPDF is a command-line program that does structural, content-preserving
@@ -693,7 +693,9 @@ transformations on PDF files. It could have been called something like
pdf-to-pdf. It includes support for merging and splitting PDFs and to
manipulate the list of pages in a PDF file. It is not a PDF viewer or a
program capable of converting PDF into other formats.")
- (license license:clarified-artistic)
+ ;; Prior to the 7.0 release, QPDF was licensed under Artistic 2.0.
+ ;; Users can still choose to use the old license at their option.
+ (license (list license:asl2.0 license:clarified-artistic))
(home-page "http://qpdf.sourceforge.net/")))
(define-public xournal
diff --git a/gnu/packages/pulseaudio.scm b/gnu/packages/pulseaudio.scm
index bac92eafa9..35d499522b 100644
--- a/gnu/packages/pulseaudio.scm
+++ b/gnu/packages/pulseaudio.scm
@@ -7,6 +7,7 @@
;;; Copyright © 2017 Leo Famulari <leo@famulari.name>
;;; Copyright © 2017 Stefan Reichör <stefan@xsteve.at>
;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018 Pierre Langlois <pierre.langlois@gmx.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -31,6 +32,7 @@
#:use-module (guix build-system python)
#:use-module (gnu packages)
#:use-module (gnu packages algebra)
+ #:use-module (gnu packages audio)
#:use-module (gnu packages autotools)
#:use-module (gnu packages avahi)
#:use-module (gnu packages check)
@@ -122,7 +124,7 @@ rates.")
(define-public pulseaudio
(package
(name "pulseaudio")
- (version "11.1")
+ (version "12.2")
(source (origin
(method url-fetch)
(uri (string-append
@@ -130,7 +132,7 @@ rates.")
name "-" version ".tar.xz"))
(sha256
(base32
- "17ndr6kc7hpv4ih4gygwlcpviqifbkvnk4fbwf4n25kpb991qlpj"))
+ "0ma0p8iry7fil7qb4pm2nx2pm65kq9hk9xc4r5wkf14nqbzni5l0"))
(modules '((guix build utils)))
(snippet
;; Disable console-kit support by default since it's deprecated
@@ -141,7 +143,6 @@ rates.")
(string-append "#" all "\n")))
#t))
(patches (search-patches
- "pulseaudio-glibc-2.27.patch"
"pulseaudio-fix-mult-test.patch"
"pulseaudio-longer-test-timeout.patch"))))
(build-system gnu-build-system)
@@ -153,13 +154,6 @@ rates.")
(assoc-ref %outputs "out")
"/lib/udev/rules.d"))
#:phases (modify-phases %standard-phases
- (replace 'bootstrap
- ;; TODO: Remove this custom bootstrap phase when
- ;; pulseaudio-glibc-2.27.patch is removed.
- (lambda _
- (patch-shebang "git-version-gen")
- (setenv "NOCONFIGURE" "1")
- (invoke "bash" "bootstrap.sh")))
(add-before 'check 'pre-check
(lambda _
;; 'tests/lock-autospawn-test.c' wants to create a file
@@ -174,25 +168,21 @@ rates.")
`(("alsa-lib" ,alsa-lib)
("bluez" ,bluez)
("sbc" ,sbc)
- ("speex" ,speex)
+ ("speexdsp" ,speexdsp)
("libsndfile" ,libsndfile)
- ("libsamplerate" ,libsamplerate)
+ ("jack" ,jack-1) ; For routing the output to jack.
("dbus" ,dbus)
("glib" ,glib)
- ("intltool" ,intltool)
- ("m4" ,m4)
("libltdl" ,libltdl)
("fftwf" ,fftwf)
("avahi" ,avahi)
- ("eudev" ,eudev) ;for the detection of hardware audio devices
- ("check" ,check)))
+ ("eudev" ,eudev))) ;for the detection of hardware audio devices
(native-inputs
- `(("pkg-config" ,pkg-config)
- ;; TODO: Remove "autoconf", "automake", and "libtool" from
- ;; native-inputs when pulseaudio-glibc-2.27.patch is removed.
- ("autoconf" ,autoconf)
- ("automake" ,automake)
- ("libtool" ,libtool)))
+ `(("check" ,check)
+ ("glib:bin" ,glib "bin")
+ ("intltool" ,intltool)
+ ("m4" ,m4)
+ ("pkg-config" ,pkg-config)))
(propagated-inputs
;; 'libpulse*.la' contain `-lgdbm' and `-lcap', so propagate them.
`(("libcap" ,libcap)
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index d4448f23ad..3b10f05e75 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -2826,14 +2826,14 @@ and is very extensible.")
(define-public python-cython
(package
(name "python-cython")
- (version "0.27")
+ (version "0.28.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Cython" version))
(sha256
(base32
- "02y0pp1nx77b8s1mpxc6da2dccl6wd31pp4ksi9via479qcvacmr"))))
+ "0imw9s2rbrh32clbl10csnwmig9p3nzkrd2baxxxfmnrsc42pb3n"))))
(build-system python-build-system)
;; we need the full python package and not just the python-wrapper
;; because we need libpython3.3m.so
@@ -2846,7 +2846,7 @@ and is very extensible.")
;; some tests require access to "$HOME/.cython"
(lambda _ (setenv "HOME" "/tmp") #t))
(replace 'check
- (lambda _ (zero? (system* "python" "runtests.py" "-vv")))))))
+ (lambda _ (invoke "python" "runtests.py" "-vv"))))))
(home-page "http://cython.org/")
(synopsis "C extensions for Python")
(description "Cython is an optimising static compiler for both the Python
diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm
index 605e461a6c..9e6dba4175 100644
--- a/gnu/packages/video.scm
+++ b/gnu/packages/video.scm
@@ -559,7 +559,7 @@ libebml is a C++ library to read and write EBML files.")
(define-public libva
(package
(name "libva")
- (version "2.1.0")
+ (version "2.2.0")
(source
(origin
(method url-fetch)
@@ -571,7 +571,7 @@ libebml is a C++ library to read and write EBML files.")
(string-append "https://www.freedesktop.org/software/vaapi/releases/"
"libva/libva-" version "/libva-" version ".tar.bz2")))
(sha256
- (base32 "03sb1b3fxw8myf9kz6rxw5f3v1p0vfmk34779qx0q8fk24x9bypk"))))
+ (base32 "1wjfrs261fp9wkhgpmrlz5smnhxrmsk31way646x6i2mg16a0v3g"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm
index c4b78d0b64..b976d6ea08 100644
--- a/gnu/packages/web.scm
+++ b/gnu/packages/web.scm
@@ -813,7 +813,7 @@ for efficient socket-like bidirectional reliable communication channels.")
(define-public libpsl
(package
(name "libpsl")
- (version "0.20.1")
+ (version "0.20.2")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/rockdaboot/libpsl/"
@@ -821,7 +821,7 @@ for efficient socket-like bidirectional reliable communication channels.")
"/libpsl-" version ".tar.gz"))
(sha256
(base32
- "17r18y25ka2ck2ykfidbg4a7jpyzmkqwrzplgqjp7mwd2l9rc6cm"))))
+ "03sn3fbcrmgl9x2f1gc6rbrdlbrnwbhrnkgi733gqb95cvmhmzgq"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
diff --git a/gnu/packages/xorg.scm b/gnu/packages/xorg.scm
index b238ea4aad..57cea3fee5 100644
--- a/gnu/packages/xorg.scm
+++ b/gnu/packages/xorg.scm
@@ -2387,7 +2387,7 @@ XC-APPGROUP, XTEST.")
(define-public libevdev
(package
(name "libevdev")
- (version "1.5.6")
+ (version "1.5.9")
(source
(origin
(method url-fetch)
@@ -2395,7 +2395,7 @@ XC-APPGROUP, XTEST.")
name "-" version ".tar.xz"))
(sha256
(base32
- "1256ypz93039n6km4macg158fpmjgylhmcmk20pnklxicsfpxv7c"))))
+ "0xca343ff12wh6nsq76r0nbsfrm8dypjrzm4fqz9vv9v8i8kfrp1"))))
(build-system gnu-build-system)
(native-inputs `(("python" ,python)))
(home-page "https://www.freedesktop.org/wiki/Software/libevdev/")
@@ -4566,7 +4566,7 @@ cannot be adequately worked around on the client side of the wire.")
(define-public libxinerama
(package
(name "libxinerama")
- (version "1.1.3")
+ (version "1.1.4")
(source
(origin
(method url-fetch)
@@ -4576,7 +4576,7 @@ cannot be adequately worked around on the client side of the wire.")
".tar.bz2"))
(sha256
(base32
- "1qlqfvzw45gdzk9xirgwlp2qgj0hbsyiqj8yh8zml2bk2ygnjibs"))))
+ "086p0axqj57nvkaqa6r00dnr9kyrn1m8blgf0zjy25zpxkbxn200"))))
(build-system gnu-build-system)
(propagated-inputs
`(("xorgproto" ,xorgproto)))