diff options
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/image-processing.scm | 67 |
1 files changed, 66 insertions, 1 deletions
diff --git a/gnu/packages/image-processing.scm b/gnu/packages/image-processing.scm index 21ee52e7fb..1753b926c6 100644 --- a/gnu/packages/image-processing.scm +++ b/gnu/packages/image-processing.scm @@ -22,12 +22,23 @@ #:use-module (guix packages) #:use-module (guix utils) #:use-module (guix download) + #:use-module (guix build-system cmake) #:use-module (guix build-system gnu) #:use-module (gnu packages) + #:use-module (gnu packages algebra) + #:use-module (gnu packages boost) #:use-module (gnu packages compression) #:use-module (gnu packages documentation) + #:use-module (gnu packages gnome) + #:use-module (gnu packages graphics) + #:use-module (gnu packages graphviz) #:use-module (gnu packages image) - #:use-module (gnu packages perl)) + #:use-module (gnu packages maths) + #:use-module (gnu packages perl) + #:use-module (gnu packages pkg-config) + #:use-module (gnu packages python) + #:use-module (gnu packages xml) + #:use-module (gnu packages vtk)) ;; We use the latest snapshot of this package because the latest release is ;; from 2011 and has known vulnerabilities that cannot easily be fixed by @@ -63,3 +74,57 @@ demonstrative image storage and worklist servers.") "file://COPYRIGHT" "A union of the Apache 2.0 licence and various non-copyleft licences similar to the Modified BSD licence.")))) + +(define-public mia + (package + (name "mia") + (version "2.4.4") + (source (origin + (method url-fetch) + (uri (string-append "mirror://sourceforge/mia/mia/" + (version-major+minor version) + "/mia-" version ".tar.xz")) + (sha256 + (base32 + "124gvf8nkls59mlnx8ynq00n9zrah7a54gsywafx7qmfr0y95ra7")))) + (build-system cmake-build-system) + (arguments + `(#:configure-flags + (list "-DMIA_CREATE_NIPYPE_INTERFACES=0" + (string-append "-DCMAKE_INSTALL_LIBDIR=" + (assoc-ref %outputs "out") "/lib") + "-DCMAKE_CXX_FLAGS=-fpermissive"))) + (inputs + `(("boost" ,boost) + ("dcmtk" ,dcmtk) + ("doxygen" ,doxygen) + ("eigen" ,eigen) + ("fftw" ,fftw) + ("fftwf" ,fftwf) + ("gsl" ,gsl) + ("gts" ,gts) + ("hdf5" ,hdf5) + ("itpp" ,itpp) + ("libjpeg" ,libjpeg) + ("libpng" ,libpng) + ("libtiff" ,libtiff) + ("libxml" ,libxml2) + ("libxml++" ,libxml++) + ("maxflow" ,maxflow) + ("niftilib" ,niftilib) + ("nlopt" ,nlopt) + ("openexr" ,openexr) + ("python-lxml" ,python2-lxml) + ("vtk" ,vtk))) + (native-inputs + `(("pkg-config" ,pkg-config) + ("python" ,python-2))) + (home-page "http://mia.sourceforge.net") + (synopsis "Toolkit for gray scale medical image analysis") + (description "MIA provides a combination of command line tools, plug-ins, +and libraries that make it possible run image processing tasks interactively +in a command shell and to prototype using the shell's scripting language. It +is built around a plug-in structure that makes it easy to add functionality +without compromising the original code base and it makes use of a wide variety +of external libraries that provide additional functionality.") + (license license:gpl3+))) |