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-rw-r--r--gnu/packages/astronomy.scm6
-rw-r--r--gnu/packages/bioinformatics.scm313
-rw-r--r--gnu/packages/code.scm5
-rw-r--r--gnu/packages/emacs.scm3
-rw-r--r--gnu/packages/games.scm12
-rw-r--r--gnu/packages/gnome.scm5
-rw-r--r--gnu/packages/guile.scm32
-rw-r--r--gnu/packages/kde-frameworks.scm170
-rw-r--r--gnu/packages/kde.scm2
-rw-r--r--gnu/packages/linux.scm43
-rw-r--r--gnu/packages/markup.scm (renamed from gnu/packages/markdown.scm)39
-rw-r--r--gnu/packages/patches/artanis-fix-Makefile.in.patch70
-rw-r--r--gnu/packages/patches/raptor2-heap-overflow.patch51
-rw-r--r--gnu/packages/php.scm4
-rw-r--r--gnu/packages/python.scm20
-rw-r--r--gnu/packages/rdf.scm2
-rw-r--r--gnu/packages/serialization.scm4
-rw-r--r--gnu/packages/shells.scm4
-rw-r--r--gnu/packages/statistics.scm54
-rw-r--r--gnu/packages/tls.scm30
-rw-r--r--gnu/packages/video.scm6
-rw-r--r--gnu/packages/xdisorg.scm28
-rw-r--r--gnu/packages/xorg.scm8
23 files changed, 690 insertions, 221 deletions
diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
index 6984f10742..2aa65d5880 100644
--- a/gnu/packages/astronomy.scm
+++ b/gnu/packages/astronomy.scm
@@ -93,7 +93,7 @@ systems in a FITS image header.")
(define-public gnuastro
(package
(name "gnuastro")
- (version "0.2")
+ (version "0.3")
(source
(origin
(method url-fetch)
@@ -101,7 +101,7 @@ systems in a FITS image header.")
version ".tar.gz"))
(sha256
(base32
- "0099g7zqg1gr9y94ybhyjgx9pkn9zv4rj1xb00fkybfw8w6ij9iv"))))
+ "109xjwbs36gbkx5sd5yzf6ailfcldc5d28vl1n19z0ylfzww4nwa"))))
(inputs
`(("cfitsio" ,cfitsio)
("gsl" ,gsl)
@@ -109,7 +109,7 @@ systems in a FITS image header.")
("wcslib" ,wcslib)))
(build-system gnu-build-system)
(home-page "https://www.gnu.org/software/gnuastro/")
- (synopsis "Astronomical data manipulation programs")
+ (synopsis "Astronomy utilities")
(description "The GNU Astronomy Utilities (Gnuastro) is a suite of
programs for the manipulation and analysis of astronomical data.")
(license license:gpl3+)))
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index a5c28afc6e..b47f136935 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -85,6 +85,7 @@
#:use-module (gnu packages ruby)
#:use-module (gnu packages serialization)
#:use-module (gnu packages statistics)
+ #:use-module (gnu packages swig)
#:use-module (gnu packages tbb)
#:use-module (gnu packages tex)
#:use-module (gnu packages texinfo)
@@ -2093,7 +2094,7 @@ identify enrichments with functional annotations of the genome.")
(define-public diamond
(package
(name "diamond")
- (version "0.9.3")
+ (version "0.9.6")
(source (origin
(method url-fetch)
(uri (string-append
@@ -2102,7 +2103,7 @@ identify enrichments with functional annotations of the genome.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "1fs5ilvda50vfdg9wll35w8hcpq3jlkp8q2kim4llkwljkj8bls3"))))
+ "1y8a10b695pvgn7kk2s87jdwbdf7iszpnr6139pw8ina1ajs4w8y"))))
(build-system cmake-build-system)
(arguments
'(#:tests? #f ; no "check" target
@@ -9223,3 +9224,311 @@ working with SAM and BAM files. Current parallelised functionality is
an important subset of samtools functionality, including view, index,
sort, markdup, and depth.")
(license license:gpl2+)))
+
+(define-public ritornello
+ (package
+ (name "ritornello")
+ (version "1.0.0")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/KlugerLab/"
+ "Ritornello/archive/v"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "02nik86gq9ljjriv6pamwlmqnfky3ads1fpklx6mc3hx6k40pg38"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:tests? #f ; there are no tests
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'patch-samtools-references
+ (lambda* (#:key inputs #:allow-other-keys)
+ (substitute* '("src/SamStream.h"
+ "src/BufferedGenomeReader.h")
+ (("<sam.h>") "<samtools/sam.h>"))
+ #t))
+ (delete 'configure)
+ (replace 'install
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (bin (string-append out "/bin/")))
+ (mkdir-p bin)
+ (install-file "bin/Ritornello" bin)
+ #t))))))
+ (inputs
+ `(("samtools" ,samtools-0.1)
+ ("fftw" ,fftw)
+ ("boost" ,boost)
+ ("zlib" ,zlib)))
+ (home-page "https://github.com/KlugerLab/Ritornello")
+ (synopsis "Control-free peak caller for ChIP-seq data")
+ (description "Ritornello is a ChIP-seq peak calling algorithm based on
+signal processing that can accurately call binding events without the need to
+do a pair total DNA input or IgG control sample. It has been tested for use
+with narrow binding events such as transcription factor ChIP-seq.")
+ (license license:gpl3+)))
+
+(define-public trim-galore
+ (package
+ (name "trim-galore")
+ (version "0.4.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "http://www.bioinformatics.babraham.ac.uk/"
+ "projects/trim_galore/trim_galore_v"
+ version ".zip"))
+ (sha256
+ (base32
+ "0b9qdxi4521gsrjvbhgky8g7kry9b5nx3byzaxkgxz7p4k8bn1mn"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:tests? #f ; no tests
+ #:phases
+ (modify-phases %standard-phases
+ ;; The archive contains plain files.
+ (replace 'unpack
+ (lambda* (#:key source #:allow-other-keys)
+ (zero? (system* "unzip" source))))
+ (delete 'configure)
+ (delete 'build)
+ (add-after 'unpack 'hardcode-tool-references
+ (lambda* (#:key inputs #:allow-other-keys)
+ (substitute* "trim_galore"
+ (("\\$path_to_cutadapt = 'cutadapt'")
+ (string-append "$path_to_cutadapt = '"
+ (assoc-ref inputs "cutadapt")
+ "/bin/cutadapt'"))
+ (("\\| gzip")
+ (string-append "| "
+ (assoc-ref inputs "gzip")
+ "/bin/gzip"))
+ (("\"gunzip")
+ (string-append "\""
+ (assoc-ref inputs "gzip")
+ "/bin/gunzip")))
+ #t))
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let ((bin (string-append (assoc-ref outputs "out")
+ "/bin")))
+ (mkdir-p bin)
+ (install-file "trim_galore" bin)
+ #t))))))
+ (inputs
+ `(("gzip" ,gzip)
+ ("perl" ,perl)
+ ("cutadapt" ,cutadapt)))
+ (native-inputs
+ `(("unzip" ,unzip)))
+ (home-page "http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/")
+ (synopsis "Wrapper around Cutadapt and FastQC")
+ (description "Trim Galore! is a wrapper script to automate quality and
+adapter trimming as well as quality control, with some added functionality to
+remove biased methylation positions for RRBS sequence files.")
+ (license license:gpl3+)))
+
+(define-public gess
+ (package
+ (name "gess")
+ (version "1.0")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "http://compbio.uthscsa.edu/"
+ "GESS_Web/files/"
+ "gess-" version ".src.tar.gz"))
+ (sha256
+ (base32
+ "0hyk403kxscclzfs24pvdgiv0wm03kjcziqdrp5w46cb049gz0d7"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:tests? #f ; no tests
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (delete 'build)
+ (replace 'install
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (let* ((python (assoc-ref inputs "python"))
+ (out (assoc-ref outputs "out"))
+ (bin (string-append out "/bin/"))
+ (target (string-append
+ out "/lib/python2.7/site-packages/gess/")))
+ (mkdir-p target)
+ (copy-recursively "." target)
+ ;; Make GESS.py executable
+ (chmod (string-append target "GESS.py") #o555)
+ ;; Add Python shebang to the top and make Matplotlib
+ ;; usable.
+ (substitute* (string-append target "GESS.py")
+ (("\"\"\"Description:" line)
+ (string-append "#!" (which "python") "
+import matplotlib
+matplotlib.use('Agg')
+" line)))
+ ;; Make sure GESS has all modules in its path
+ (wrap-program (string-append target "GESS.py")
+ `("PYTHONPATH" ":" prefix (,target ,(getenv "PYTHONPATH"))))
+ (mkdir-p bin)
+ (symlink (string-append target "GESS.py")
+ (string-append bin "GESS.py"))
+ #t))))))
+ (inputs
+ `(("python" ,python-2)
+ ("python2-pysam" ,python2-pysam)
+ ("python2-scipy" ,python2-scipy)
+ ("python2-numpy" ,python2-numpy)
+ ("python2-networkx" ,python2-networkx)
+ ("python2-biopython" ,python2-biopython)))
+ (home-page "http://compbio.uthscsa.edu/GESS_Web/")
+ (synopsis "Detect exon-skipping events from raw RNA-seq data")
+ (description
+ "GESS is an implementation of a novel computational method to detect de
+novo exon-skipping events directly from raw RNA-seq data without the prior
+knowledge of gene annotation information. GESS stands for the graph-based
+exon-skipping scanner detection scheme.")
+ (license license:bsd-3)))
+
+(define-public phylip
+ (package
+ (name "phylip")
+ (version "3.696")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "http://evolution.gs.washington.edu/phylip/"
+ "download/phylip-" version ".tar.gz"))
+ (sha256
+ (base32
+ "01jar1rayhr2gba2pgbw49m56rc5z4p5wn3ds0m188hrlln4a2nd"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:tests? #f ; no check target
+ #:make-flags (list "-f" "Makefile.unx" "install")
+ #:parallel-build? #f ; not supported
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'enter-dir
+ (lambda _ (chdir "src") #t))
+ (delete 'configure)
+ (replace 'install
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (let ((target (string-append (assoc-ref outputs "out")
+ "/bin")))
+ (mkdir-p target)
+ (for-each (lambda (file)
+ (install-file file target))
+ (find-files "../exe" ".*")))
+ #t)))))
+ (home-page "http://evolution.genetics.washington.edu/phylip/")
+ (synopsis "Tools for inferring phylogenies")
+ (description "PHYLIP (the PHYLogeny Inference Package) is a package of
+programs for inferring phylogenies (evolutionary trees).")
+ (license license:bsd-2)))
+
+(define-public imp
+ (package
+ (name "imp")
+ (version "2.6.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://integrativemodeling.org/"
+ version "/download/imp-" version ".tar.gz"))
+ (sha256
+ (base32
+ "0lxqx7vh79d771svr611dkilp6sn30qrbw8zvscbrm37v38d2j6h"))))
+ (build-system cmake-build-system)
+ (arguments
+ `(;; FIXME: Some tests fail because they produce warnings, others fail
+ ;; because the PYTHONPATH does not include the modeller's directory.
+ #:tests? #f
+ ;; Do not place libraries in an architecture-specific directory.
+ #:configure-flags
+ (list "-DCMAKE_INSTALL_LIBDIR=lib")))
+ (inputs
+ `(("boost" ,boost)
+ ("gsl" ,gsl)
+ ("swig" ,swig)
+ ("hdf5" ,hdf5)
+ ("fftw" ,fftw)
+ ("python" ,python-2)))
+ (propagated-inputs
+ `(("python2-numpy" ,python2-numpy)
+ ("python2-scipy" ,python2-scipy)
+ ("python2-pandas" ,python2-pandas)
+ ("python2-scikit-learn" ,python2-scikit-learn)
+ ("python2-networkx" ,python2-networkx)))
+ (home-page "https://integrativemodeling.org")
+ (synopsis "Integrative modeling platform")
+ (description "IMP's broad goal is to contribute to a comprehensive
+structural characterization of biomolecules ranging in size and complexity
+from small peptides to large macromolecular assemblies, by integrating data
+from diverse biochemical and biophysical experiments. IMP provides a C++ and
+Python toolbox for solving complex modeling problems, and a number of
+applications for tackling some common problems in a user-friendly way.")
+ ;; IMP is largely available under the GNU Lesser GPL; see the file
+ ;; COPYING.LGPL for the full text of this license. Some IMP modules are
+ ;; available under the GNU GPL (see the file COPYING.GPL).
+ (license (list license:lgpl2.1+
+ license:gpl3+))))
+
+(define-public tadbit
+ (package
+ (name "tadbit")
+ (version "0.2")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/3DGenomes/TADbit/"
+ "archive/v" version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1cnfqrl4685zar4nnw94j94nhvl2h29jm448nadqi1h05z6fdk4f"))))
+ (build-system python-build-system)
+ (arguments
+ `(;; Tests are included and must be run after installation, but
+ ;; they are incomplete and thus cannot be run.
+ #:tests? #f
+ #:python ,python-2
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'fix-problems-with-setup.py
+ (lambda* (#:key outputs #:allow-other-keys)
+ ;; setup.py opens these files for writing
+ (chmod "_pytadbit/_version.py" #o664)
+ (chmod "README.rst" #o664)
+
+ ;; Don't attempt to install the bash completions to
+ ;; the home directory.
+ (rename-file "extras/.bash_completion"
+ "extras/tadbit")
+ (substitute* "setup.py"
+ (("\\(path.expanduser\\('~'\\)")
+ (string-append "(\""
+ (assoc-ref outputs "out")
+ "/etc/bash_completion.d\""))
+ (("extras/\\.bash_completion")
+ "extras/tadbit"))
+ #t)))))
+ (inputs
+ ;; TODO: add Chimera for visualization
+ `(("imp" ,imp)
+ ("mcl" ,mcl)
+ ("python2-scipy" ,python2-scipy)
+ ("python2-numpy" ,python2-numpy)
+ ("python2-matplotlib" ,python2-matplotlib)
+ ("python2-pysam" ,python2-pysam)))
+ (home-page "http://3dgenomes.github.io/TADbit/")
+ (synopsis "Analyze, model, and explore 3C-based data")
+ (description
+ "TADbit is a complete Python library to deal with all steps to analyze,
+model, and explore 3C-based data. With TADbit the user can map FASTQ files to
+obtain raw interaction binned matrices (Hi-C like matrices), normalize and
+correct interaction matrices, identify adn compare the so-called
+@dfn{Topologically Associating Domains} (TADs), build 3D models from the
+interaction matrices, and finally, extract structural properties from the
+models. TADbit is complemented by TADkit for visualizing 3D models.")
+ (license license:gpl3+)))
diff --git a/gnu/packages/code.scm b/gnu/packages/code.scm
index 1576c23b35..6f25b7cd82 100644
--- a/gnu/packages/code.scm
+++ b/gnu/packages/code.scm
@@ -4,6 +4,7 @@
;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017 Clément Lassieur <clement@lassieur.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -191,7 +192,7 @@ COCOMO model or user-provided parameters.")
(define-public the-silver-searcher
(package
(name "the-silver-searcher")
- (version "1.0.2")
+ (version "2.0.0")
(source (origin
(method url-fetch)
(uri (string-append
@@ -199,7 +200,7 @@ COCOMO model or user-provided parameters.")
version ".tar.gz"))
(sha256
(base32
- "0v54himv65w294l0k4lhdyc6kvpgijn8b9g5356479fzy7hphjkg"))))
+ "04wm3r5p2mgv8mdkvysak0d5199h5y0yzl032624brfxpzmqfcq0"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
diff --git a/gnu/packages/emacs.scm b/gnu/packages/emacs.scm
index 987aaf4226..a4cb4a0b3a 100644
--- a/gnu/packages/emacs.scm
+++ b/gnu/packages/emacs.scm
@@ -4814,7 +4814,8 @@ Emacs.")
;; determined by emacs' standard initialization
;; procedure
(list ""))))
- #t))))))
+ #t))))
+ #:include (cons* "^reporters/.*\\.el$" %default-include)))
(home-page "https://github.com/rejeep/ert-runner.el")
(synopsis "Opinionated Ert testing workflow")
(description "@code{ert-runner} is a tool for Emacs projects tested
diff --git a/gnu/packages/games.scm b/gnu/packages/games.scm
index 9153a2b5cf..a76ab1ddc2 100644
--- a/gnu/packages/games.scm
+++ b/gnu/packages/games.scm
@@ -959,7 +959,7 @@ match, cannon keep, and grave-itation pit.")
(define minetest-data
(package
(name "minetest-data")
- (version "0.4.15")
+ (version "0.4.16")
(source (origin
(method url-fetch)
(uri (string-append
@@ -968,7 +968,7 @@ match, cannon keep, and grave-itation pit.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "12kxklcd1b5n0f369zf3xxhvkrizxj4d9xv0dh8crfqiymaym0zm"))))
+ "0nibpm600rbv9dg1zgcsl5grlbqx0b5l6cg1lp6sqkwvjialb4ga"))))
(build-system trivial-build-system)
(native-inputs
`(("source" ,source)
@@ -1000,7 +1000,7 @@ match, cannon keep, and grave-itation pit.")
(define-public minetest
(package
(name "minetest")
- (version "0.4.15")
+ (version "0.4.16")
(source (origin
(method url-fetch)
(uri (string-append
@@ -1009,7 +1009,7 @@ match, cannon keep, and grave-itation pit.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "1ag3jcj7kpq3ph12zirk1c0mj9i0g50wmw932f8gi11liq8yd12n"))))
+ "0mbnf1ma4gsw9ah68ply04059xkfx5psdxwalxp78sgmx4ypkwqf"))))
(build-system cmake-build-system)
(arguments
'(#:configure-flags
@@ -4035,7 +4035,7 @@ fish. The whole game is accompanied by quiet, comforting music.")
(define-public crawl
(package
(name "crawl")
- (version "0.19.5")
+ (version "0.20.0")
(source
(origin
(method url-fetch)
@@ -4049,7 +4049,7 @@ fish. The whole game is accompanied by quiet, comforting music.")
version "-nodeps.tar.xz")))
(sha256
(base32
- "00yl2lb2shglxlxzpyk99zvglfx4amjybqwnzdcasvbiggb4cj18"))))
+ "0127dgldij2h4m7cf32yy9ndv4vcz03g4km71lmxrsi5mw7ljgpd"))))
(build-system gnu-build-system)
(inputs
`(("lua51" ,lua-5.1)
diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm
index ebf598d9c7..7dca113fe0 100644
--- a/gnu/packages/gnome.scm
+++ b/gnu/packages/gnome.scm
@@ -2634,6 +2634,7 @@ output devices.")
(("/bin/true") (which "true"))))))))
(native-inputs
`(("pkg-config" ,pkg-config)
+ ("gobject-introspection" ,gobject-introspection)
("intltool" ,intltool)))
(inputs
`(("avahi" ,avahi)
@@ -5110,6 +5111,10 @@ properties, screen resolution, and other GNOME parameters.")
("startup-notification" ,startup-notification)
("telepathy-logger" ,telepathy-logger)
("upower" ,upower)
+ ;; XXX: These requirements were added in 3.24, but no mention in NEWS.
+ ;; Missing propagation? See also: <https://bugs.gnu.org/27264>
+ ("librsvg" ,librsvg)
+ ("geoclue" ,geoclue)
;; XXX: required by libgjs.la.
("readline" ,readline)))
(synopsis "Desktop shell for GNOME")
diff --git a/gnu/packages/guile.scm b/gnu/packages/guile.scm
index bcfbe65aec..e4629d90d6 100644
--- a/gnu/packages/guile.scm
+++ b/gnu/packages/guile.scm
@@ -239,7 +239,8 @@ without requiring the source code to be rewritten.")
(snippet '(for-each delete-file
(find-files "prebuilt" "\\.go$")))))
(properties '((timeout . 72000) ;20 hours
- (max-silent-time . 10800))) ;3 hours (needed on ARM)
+ (max-silent-time . 21600))) ;6 hours (needed on ARM
+ ; when heavily loaded)
(native-search-paths
(list (search-path-specification
(variable "GUILE_LOAD_PATH")
@@ -393,18 +394,17 @@ program can be installed in one go.")
(define-public artanis
(package
(name "artanis")
- (version "0.1.2")
+ (version "0.2.1")
(source (origin
(method url-fetch)
(uri (string-append "ftp://alpha.gnu.org/gnu/artanis/artanis-"
version ".tar.gz"))
(sha256
(base32
- "19m3ak12cqk8js9d2mdg11kh4fjsq8frfpd10qw75h0zpr5cywpp"))
- (patches (search-patches "artanis-fix-Makefile.in.patch"))))
+ "041ajcg2pz918kd9iqcj4inpzddc3impvz3r2nhlpbv8zrz011hn"))))
(build-system gnu-build-system)
;; TODO: Add guile-dbi and guile-dbd optional dependencies.
- (inputs `(("guile" ,guile-2.0)))
+ (inputs `(("guile" ,guile-2.2)))
(native-inputs `(("bash" ,bash) ;for the `source' builtin
("pkgconfig" ,pkg-config)
("util-linux" ,util-linux))) ;for the `script' command
@@ -412,15 +412,15 @@ program can be installed in one go.")
'(#:make-flags
;; TODO: The documentation must be built with the `docs' target.
(let* ((out (assoc-ref %outputs "out"))
- (dir (string-append out "/share/guile/site/2.0")))
+ (scm (string-append out "/share/guile/site/2.2"))
+ (go (string-append out "/lib/guile/2.2/site-ccache")))
;; Don't use (%site-dir) for site paths.
- (list (string-append "MOD_PATH=" dir)
- (string-append "MOD_COMPILED_PATH=" dir)))
+ (list (string-append "MOD_PATH=" scm)
+ (string-append "MOD_COMPILED_PATH=" go)))
#:test-target "test"
#:phases
(modify-phases %standard-phases
- (add-before
- 'install 'substitute-root-dir
+ (add-before 'install 'substitute-root-dir
(lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(substitute* "Makefile" ;ignore the execution of bash.bashrc
@@ -428,7 +428,17 @@ program can be installed in one go.")
(substitute* "Makefile" ;set the root of config files to OUT
((" /etc") (string-append " " out "/etc")))
(mkdir-p (string-append out "/bin")) ;for the `art' executable
- #t))))))
+ #t)))
+ (add-after 'install 'wrap-art
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (bin (string-append out "/bin"))
+ (scm (string-append out "/share/guile/site/2.2"))
+ (go (string-append out "/lib/guile/2.2/site-ccache")))
+ (wrap-program (string-append bin "/art")
+ `("GUILE_LOAD_PATH" ":" prefix (,scm))
+ `("GUILE_LOAD_COMPILED_PATH" ":" prefix (,go)))
+ #t))))))
(synopsis "Web application framework written in Guile")
(description "GNU Artanis is a web application framework written in Guile
Scheme. A web application framework (WAF) is a software framework that is
diff --git a/gnu/packages/kde-frameworks.scm b/gnu/packages/kde-frameworks.scm
index 07943e1e5e..8fe71d5b5d 100644
--- a/gnu/packages/kde-frameworks.scm
+++ b/gnu/packages/kde-frameworks.scm
@@ -43,8 +43,11 @@
#:use-module (gnu packages glib)
#:use-module (gnu packages gnome)
#:use-module (gnu packages gnupg)
+ #:use-module (gnu packages graphics)
#:use-module (gnu packages gstreamer)
#:use-module (gnu packages image)
+ #:use-module (gnu packages kerberos)
+ #:use-module (gnu packages libreoffice)
#:use-module (gnu packages linux)
#:use-module (gnu packages mp3)
#:use-module (gnu packages pdf)
@@ -120,6 +123,8 @@ common build settings used in software produced by the KDE community.")
"177647r2jqfm32hqcz2nqfqv6v48hn5ab2vc31svba2wz23fkgk7"))))
(build-system cmake-build-system)
(native-inputs
+ ;; TODO: Add qttools to build the Qt Designer plugin.
+ ;; TODO: Think about adding pulseaudio. Is it required for sound?
`(("extra-cmake-modules" ,extra-cmake-modules)))
(inputs
`(("qtbase" ,qtbase)))
@@ -202,7 +207,8 @@ Phonon-GStreamer is a backend based on the GStreamer multimedia library.")
(home-page "https://community.kde.org/Frameworks")
(synopsis "C++ bindings/wrapper for gpgme")
(description "C++ bindings/wrapper for gpgme.")
- (license license:lgpl2.1+)))
+ (license license:lgpl2.1+)
+ (properties `((superseded . ,gpgme)))))
(define-public kpmcore
(package
@@ -292,6 +298,7 @@ http://freedesktop.org/wiki/Specifications/open-collaboration-services/")
`(("dbus" ,dbus)
("extra-cmake-modules" ,extra-cmake-modules)))
(inputs
+ ;; TODO: qtdeclarative (yields one failing test)
`(("qtbase" ,qtbase)))
(arguments
`(#:configure-flags
@@ -639,11 +646,16 @@ infrastructure.")
(base32
"1nmlwvy2jdmh0m6bmahvk68vl2rs9s28c10dkncpi6gvhsdkigqx"))))
(build-system cmake-build-system)
+ ;; TODO: Build packages for the Python bindings. Ideally this will be
+ ;; done for all versions of python guix supports. Requires python,
+ ;; python-sip, clang-python, libclang. Requires python-2 in all cases for
+ ;; clang-python.
(native-inputs
`(("extra-cmake-modules" ,extra-cmake-modules)
- ("xorg-server" ,xorg-server)))
+ ("pkg-config" ,pkg-config)))
(inputs
- `(("qtbase" ,qtbase)))
+ `(("qtbase" ,qtbase)
+ ("qtx11extras" ,qtx11extras)))
(arguments
`(#:phases
(modify-phases %standard-phases
@@ -743,19 +755,17 @@ or user activity.")
"1liq1ppa7xb1dcncv25c2a0xy3l9bvb2a56cff90c0b0vwr239q5"))))
(build-system cmake-build-system)
(native-inputs
- `(("extra-cmake-modules" ,extra-cmake-modules)
- ("xorg-server" ,xorg-server)))
+ `(("extra-cmake-modules" ,extra-cmake-modules)))
(inputs
- `(("qtbase" ,qtbase)))
+ `(("qtbase" ,qtbase)
+ ("qtdeclarative" ,qtdeclarative)))
(arguments
`(#:phases
(modify-phases %standard-phases
- (add-before 'check 'start-xorg-server
- (lambda* (#:key inputs #:allow-other-keys)
- ;; The test suite requires a running X server.
- (system (string-append (assoc-ref inputs "xorg-server")
- "/bin/Xvfb :1 &"))
- (setenv "DISPLAY" ":1")
+ (add-before 'check 'check-setup
+ (lambda _
+ ;; make Qt render "offscreen", required for tests
+ (setenv "QT_QPA_PLATFORM" "offscreen")
#t)))))
(home-page "https://community.kde.org/Frameworks")
(synopsis "Set of item models extending the Qt model-view framework")
@@ -805,8 +815,7 @@ model to observers
(build-system cmake-build-system)
(native-inputs
`(("extra-cmake-modules" ,extra-cmake-modules)
- ("qttools" ,qttools)
- ("xorg-server" ,xorg-server)))
+ ("qttools" ,qttools)))
(inputs
`(("qtbase" ,qtbase)))
(arguments
@@ -815,13 +824,8 @@ model to observers
(add-before 'check 'check-setup
(lambda _
(setenv "DBUS_FATAL_WARNINGS" "0")
- #t))
- (add-before 'check 'start-xorg-server
- (lambda* (#:key inputs #:allow-other-keys)
- ;; The test suite requires a running X server.
- (system (string-append (assoc-ref inputs "xorg-server")
- "/bin/Xvfb :1 &"))
- (setenv "DISPLAY" ":1")
+ ;; make Qt render "offscreen", required for tests
+ (setenv "QT_QPA_PLATFORM" "offscreen")
#t)))))
(home-page "https://community.kde.org/Frameworks")
(synopsis "Set of item views extending the Qt model-view framework")
@@ -845,19 +849,16 @@ to flat and hierarchical lists.")
"1ffy9b08128ym024wlfgnzk52vpy0mbaa91dhndpr40qcz0i67sh"))))
(build-system cmake-build-system)
(native-inputs
- `(("extra-cmake-modules" ,extra-cmake-modules)
- ("xorg-server" ,xorg-server)))
+ `(("extra-cmake-modules" ,extra-cmake-modules)))
(inputs
`(("qtbase" ,qtbase)))
(arguments
`(#:phases
(modify-phases %standard-phases
- (add-before 'check 'start-xorg-server
- (lambda* (#:key inputs #:allow-other-keys)
- ;; The test suite requires a running X server.
- (system (string-append (assoc-ref inputs "xorg-server")
- "/bin/Xvfb :1 &"))
- (setenv "DISPLAY" ":1")
+ (add-before 'check 'check-setup
+ (lambda _ ; kplotting
+ ;; make Qt render "offscreen", required for tests
+ (setenv "QT_QPA_PLATFORM" "offscreen")
#t)))))
(home-page "https://community.kde.org/Frameworks")
(synopsis "Data plotting library")
@@ -976,8 +977,7 @@ represented by a QPoint or a QSize.")
(inputs
`(("qtbase" ,qtbase)))
(arguments
- `(#:tests? #f ; FIXME: Regression after update to qt 5.7
- #:phases
+ `(#:phases
(modify-phases %standard-phases
(add-before 'check 'check-setup
(lambda _
@@ -1020,6 +1020,7 @@ configuration pages, message boxes, and password requests.")
(native-inputs
`(("extra-cmake-modules" ,extra-cmake-modules)
("pkg-config" ,pkg-config)
+ ("dbus" ,dbus) ; for the tests
("qttools" ,qttools)
("xorg-server" ,xorg-server))) ; for the tests
(inputs
@@ -1028,7 +1029,31 @@ configuration pages, message boxes, and password requests.")
("qtx11extras" ,qtx11extras)
("xcb-utils-keysyms" ,xcb-util-keysyms)))
(arguments
- `(#:tests? #f)) ; FIXME: 8/10 tests fail.
+ `(#:tests? #f ; FIXME: 3/12 tests fail.
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'check)
+ (add-after 'install 'check
+ (lambda* (#:key inputs outputs tests? #:allow-other-keys)
+ ;; TODO: Simplify and use "common" phases when test-suite passes
+ (if tests?
+ (begin
+ (let ((out (assoc-ref outputs "out")))
+ (setenv "QT_PLUGIN_PATH"
+ (string-append out "/lib/plugins:"
+ (getenv "QT_PLUGIN_PATH"))))
+ ;; The test suite requires a running X server, setting
+ ;; QT_QPA_PLATFORM=offscreen does not suffice and even make
+ ;; some tests fail.
+ (system (string-append (assoc-ref inputs "xorg-server")
+ "/bin/Xvfb :1 -screen 0 640x480x24 &"))
+ (setenv "DISPLAY" ":1")
+ (setenv "CTEST_OUTPUT_ON_FAILURE" "1")
+ (setenv "DBUS_FATAL_WARNINGS" "0")
+ (zero? (system* "dbus-launch" "ctest" ".")))
+ (begin
+ (format #t "test suite not run~%")
+ #t)))))))
(home-page "https://community.kde.org/Frameworks")
(synopsis "KDE access to the windowing system")
(description "KWindowSystem provides information about and allows
@@ -1175,6 +1200,7 @@ which are used in DBus communication.")
(inputs
`(("qtbase" ,qtbase)
("udev" ,eudev)))
+ ;; TODO: Add runtime-only dependency MediaPlayerInfo
(home-page "https://community.kde.org/Frameworks")
(synopsis "Desktop hardware abstraction")
(description "Solid is a device integration framework. It provides a way of
@@ -1200,7 +1226,9 @@ system.")
`(("extra-cmake-modules" ,extra-cmake-modules)
("qttools" ,qttools)))
(inputs
- `(("qtbase" ,qtbase)))
+ `(("hunspell" ,hunspell)
+ ;; TODO: hspell (for Hebrew), Voikko (for Finish)
+ ("qtbase" ,qtbase)))
(home-page "https://community.kde.org/Frameworks")
(synopsis "Multi-language spell checker")
(description "Sonnet is a plugin-based spell checking library for Qt-based
@@ -1301,8 +1329,7 @@ utilities.")
(build-system cmake-build-system)
(native-inputs
`(("extra-cmake-modules" ,extra-cmake-modules)
- ("qttools" ,qttools)
- ("xorg-server" ,xorg-server)))
+ ("qttools" ,qttools)))
(inputs
`(("kconfig" ,kconfig)
("kwidgetsaddons" ,kwidgetsaddons)
@@ -1337,8 +1364,7 @@ integrated it into your application's other widgets.")
"1cshay7dhbqgh62nq85vd9sm20gq9s9f70mdnzjjh1q7cajybkp3"))))
(build-system cmake-build-system)
(native-inputs
- `(("extra-cmake-modules" ,extra-cmake-modules)
- ("xorg-server" ,xorg-server)))
+ `(("extra-cmake-modules" ,extra-cmake-modules)))
(inputs
`(("kcoreaddons" ,kcoreaddons)
("kwindowsystem" ,kwindowsystem)
@@ -1347,12 +1373,10 @@ integrated it into your application's other widgets.")
(arguments
`(#:phases
(modify-phases %standard-phases
- (add-before 'check 'start-xorg-server
- (lambda* (#:key inputs #:allow-other-keys)
- ;; The test suite requires a running X server.
- (system "Xvfb :1 &")
- (sleep 2) ;XXX: give the server enough time to start
- (setenv "DISPLAY" ":1")
+ (add-before 'check 'check-setup
+ (lambda _
+ ;; make Qt render "offscreen", required for tests
+ (setenv "QT_QPA_PLATFORM" "offscreen")
#t)))))
(home-page "https://community.kde.org/Frameworks")
(synopsis "Graceful handling of application crashes")
@@ -1476,19 +1500,26 @@ by applications to write metadata.")
(build-system cmake-build-system)
(native-inputs
`(("extra-cmake-modules" ,extra-cmake-modules)
- ("xorg-server" ,xorg-server)))
+ ("pkg-config" ,pkg-config)))
(inputs
- `(("qtbase" ,qtbase)))
+ `(("karchive" ,karchive) ; for Krita and OpenRaster images
+ ("openexr" ,openexr) ; for OpenEXR high dynamic-range images
+ ("qtbase" ,qtbase)))
(arguments
`(#:phases
(modify-phases %standard-phases
- (add-before 'check 'start-xorg-server
- (lambda* (#:key inputs #:allow-other-keys)
- ;; The test suite requires a running X server.
- (system (string-append (assoc-ref inputs "xorg-server")
- "/bin/Xvfb :1 &"))
- (setenv "DISPLAY" ":1")
- #t)))))
+ (add-before 'check 'check-setup
+ (lambda _
+ ;; make Qt render "offscreen", required for tests
+ (setenv "QT_QPA_PLATFORM" "offscreen")
+ #t)))
+ ;; FIXME: The header files of ilmbase (propagated by openexr) are not
+ ;; found when included by the header files of openexr, and an explicit
+ ;; flag needs to be set.
+ #:configure-flags
+ (list (string-append "-DCMAKE_CXX_FLAGS=-I"
+ (assoc-ref %build-inputs "ilmbase")
+ "/include/OpenEXR"))))
(home-page "https://community.kde.org/Frameworks")
(synopsis "Plugins to allow QImage to support extra file formats")
(description "This framework provides additional image format plugins for
@@ -1550,6 +1581,9 @@ asynchronous jobs.")
("kwindowsystem" ,kwindowsystem)
("phonon" ,phonon)
("qtbase" ,qtbase)
+ ;; TODO: qtspeech (new in Qt 5.9)
+ ;; TODO: Think about adding dbusmenu-qt5 from
+ ;; https://launchpad.net/libdbusmenu-qt
("qtx11extras" ,qtx11extras)))
(arguments
`(#:phases
@@ -1588,10 +1622,11 @@ covers feedback and persistent events.")
`(("karchive" ,karchive)
("kconfig" ,kconfig)
("kcoreaddons" ,kcoreaddons)
+ ("kdoctools" ,kdoctools)
("ki18n" ,ki18n)
("qtbase" ,qtbase)))
(arguments
- `(#:tests? #f ; FIXME: 1/4 tests fail.
+ `(#:tests? #f ; FIXME: 3/9 tests fail.
#:phases
(modify-phases %standard-phases
(add-before 'check 'check-setup
@@ -1624,6 +1659,7 @@ were traditional plugins.")
(inputs
`(("kcoreaddons" ,kcoreaddons)
("ki18n" ,ki18n)
+ ;; TODO: utempter, for managing UTMP entries
("qtbase" ,qtbase)))
(arguments
`(#:tests? #f ; FIXME: 1/1 tests fail.
@@ -1989,7 +2025,8 @@ their settings.")
(modify-phases %standard-phases
(add-before 'check 'start-xorg-server
(lambda* (#:key inputs #:allow-other-keys)
- ;; The test suite requires a running X server.
+ ;; The test suite requires a running X server, setting
+ ;; QT_QPA_PLATFORM=offscreen does not suffice.
(system (string-append (assoc-ref inputs "xorg-server")
"/bin/Xvfb :1 -screen 0 640x480x24 &"))
(setenv "DISPLAY" ":1")
@@ -2219,8 +2256,7 @@ window does not need focus for them to be activated.")
("qtbase" ,qtbase)
("qtsvg" ,qtsvg)))
(arguments
- `(#:tests? #f ; FIXME: Test failure
- #:phases
+ `(#:phases
(modify-phases %standard-phases
(add-before 'check 'check-setup
(lambda* (#:key inputs #:allow-other-keys)
@@ -2252,7 +2288,8 @@ in applications using the KDE Frameworks.")
"08429kjihpaip73wszr3rsii8sdlwgm3kxx7g0hpjhkj9d2jq3m1"))))
(build-system cmake-build-system)
(native-inputs
- `(("extra-cmake-modules" ,extra-cmake-modules)))
+ `(("extra-cmake-modules" ,extra-cmake-modules)
+ ("pkg-config" ,pkg-config)))
(inputs
`(("kauth" ,kauth)
("kbookmarks" ,kbookmarks)
@@ -2262,6 +2299,7 @@ in applications using the KDE Frameworks.")
("kconfigwidgets" ,kconfigwidgets)
("kcoreaddons" ,kcoreaddons)
("kcrash" ,kcrash)
+ ("kdoctools" ,kdoctools)
("kio" ,kio)
("kitemviews" ,kitemviews)
("ki18n" ,ki18n)
@@ -2270,6 +2308,7 @@ in applications using the KDE Frameworks.")
("kwidgetsaddons" ,kwidgetsaddons)
("kwindowsystem" ,kwindowsystem)
("kxmlgui" ,kxmlgui)
+ ("libcap" ,libcap) ; to install start_kdeinit with CAP_SYS_RESOURCE
("qtbase" ,qtbase)
("solid" ,solid)))
(home-page "https://community.kde.org/Frameworks")
@@ -2310,6 +2349,7 @@ makes starting KDE applications faster and reduces memory consumption.")
("extra-cmake-modules" ,extra-cmake-modules)))
(inputs
`(("acl" ,acl)
+ ("krb5" ,mit-krb5)
("karchive" ,karchive)
("kauth" ,kauth)
("kcodecs" ,kcodecs)
@@ -2326,6 +2366,7 @@ makes starting KDE applications faster and reduces memory consumption.")
("libxml2" ,libxml2)
("libxslt" ,libxslt)
("qtbase" ,qtbase)
+ ("qtscript" ,qtscript)
("qtx11extras" ,qtx11extras)
("sonnet" ,sonnet)))
(arguments
@@ -2664,9 +2705,11 @@ types or handled by application specific code.")
(propagated-inputs
`(("kparts" ,kparts)))
(native-inputs
- `(("extra-cmake-modules" ,extra-cmake-modules)))
+ `(("extra-cmake-modules" ,extra-cmake-modules)
+ ("pkg-config" ,pkg-config)))
(inputs
- `(("karchive" ,karchive)
+ `(;; TODO: editor-config
+ ("karchive" ,karchive)
("kauth" ,kauth)
("kbookmarks" ,kbookmarks)
("kcodecs" ,kcodecs)
@@ -2745,6 +2788,7 @@ library.")
("kservice" ,kservice)
("kwidgetsaddons" ,kwidgetsaddons)
("kwindowsystem" ,kwindowsystem)
+ ;; TODO: qtspeech (new in Qt 5.9)
("qtbase" ,qtbase)))
(arguments
`(#:phases
@@ -2778,7 +2822,7 @@ It supports rich text as well as plain text.")
(native-inputs
`(("extra-cmake-modules" ,extra-cmake-modules)))
(inputs
- `(("gpgmepp" ,gpgmepp)
+ `(("gpgme" ,gpgme) ;; TODO: Add gpgme Qt-bindings
("kauth" ,kauth)
("kcodecs" ,kcodecs)
("kconfig" ,kconfig)
@@ -2915,7 +2959,8 @@ setUrl, setUserAgent and call.")
`(("kpackage" ,kpackage)
("kservice" ,kservice)))
(native-inputs
- `(("extra-cmake-modules" ,extra-cmake-modules)))
+ `(("extra-cmake-modules" ,extra-cmake-modules)
+ ("pkg-config" ,pkg-config)))
(inputs
`(("kactivities" ,kactivities)
("karchive" ,karchive)
@@ -2937,6 +2982,7 @@ setUrl, setUserAgent and call.")
("ki18n" ,ki18n)
("kjobwidgets" ,kjobwidgets)
("knotificantions" ,knotifications)
+ ("kwayland" ,kwayland)
("kwidgetsaddons" ,kwidgetsaddons)
("kwindowsystem" ,kwindowsystem)
("kxmlgui" ,kxmlgui)
@@ -2947,7 +2993,7 @@ setUrl, setUserAgent and call.")
("qtx11extras" ,qtx11extras)
("solid" ,solid)))
(arguments
- `(#:tests? #f ; FIXME: 13/14 tests fail.
+ `(#:tests? #f ; FIXME: 9/15 tests fail.
#:phases
(modify-phases %standard-phases
(add-before 'check 'check-setup
diff --git a/gnu/packages/kde.scm b/gnu/packages/kde.scm
index b481bb98db..a5ad8da062 100644
--- a/gnu/packages/kde.scm
+++ b/gnu/packages/kde.scm
@@ -293,6 +293,8 @@ used in KDE development tools Kompare and KDevelop.")
(modify-phases %standard-phases
(add-before 'configure 'patch-cmakelists
(lambda _
+ ;; TODO: Verify: This should no longer be necessary, since
+ ;; KF5AuthConfig.cmake.in contains this already.
(substitute* "processcore/CMakeLists.txt"
(("KAUTH_HELPER_INSTALL_DIR") "KDE_INSTALL_LIBEXECDIR"))))
(replace 'check
diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm
index 1a4e25d12a..afddc8ed7a 100644
--- a/gnu/packages/linux.scm
+++ b/gnu/packages/linux.scm
@@ -72,6 +72,7 @@
#:use-module (gnu packages libusb)
#:use-module (gnu packages man)
#:use-module (gnu packages maths)
+ #:use-module (gnu packages multiprecision)
#:use-module (gnu packages ncurses)
#:use-module (gnu packages networking)
#:use-module (gnu packages ninja)
@@ -357,8 +358,8 @@ It has been modified to remove all non-free binary blobs.")
(define %intel-compatible-systems '("x86_64-linux" "i686-linux"))
-(define %linux-libre-version "4.11.3")
-(define %linux-libre-hash "14fbn9s7n86p5yivr4vmh4axdavny6xw1qk63cfwlcma7426wmva")
+(define %linux-libre-version "4.11.4")
+(define %linux-libre-hash "11nd9pv18vz3g82ja71dkz9mbs0ffb8yamsd44d381szmmm2kpj8")
(define-public linux-libre
(make-linux-libre %linux-libre-version
@@ -367,14 +368,14 @@ It has been modified to remove all non-free binary blobs.")
#:configuration-file kernel-config))
(define-public linux-libre-4.9
- (make-linux-libre "4.9.30"
- "1m1ii9n65lwkbwx0ifj13vgdfr0mnx8n7sfvhf5mn4r8krhxi77a"
+ (make-linux-libre "4.9.31"
+ "0amc35c9f2rym6grb277yscnx8ybn8d4fbc2a59sgkg1lsdv7n4q"
%intel-compatible-systems
#:configuration-file kernel-config))
(define-public linux-libre-4.4
- (make-linux-libre "4.4.70"
- "1dvcj3mk42m91y1x41yh52frjdcwip1wj57qwlkmrpg02icr0b3s"
+ (make-linux-libre "4.4.71"
+ "0nrd165crx9m9s1px98if6q5dcdqwmas9kh8i4rw51gz2xinh0gx"
%intel-compatible-systems
#:configuration-file kernel-config))
@@ -3850,6 +3851,36 @@ libnftnl has been previously known as libnftables. This library is currently
used by nftables.")
(license license:gpl2+)))
+(define-public nftables
+ (package
+ (name "nftables")
+ (version "0.7")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "http://www.nftables.org/projects/nftables"
+ "/files/nftables-" version ".tar.bz2"))
+ (sha256
+ (base32
+ "0hzdqigdx4i6jbpxbdyq4zy4p4waqn8l6vvz7685ikh1v0wr4qzy"))))
+ (build-system gnu-build-system)
+ (inputs `(("bison", bison)
+ ("flex", flex)
+ ("gmp", gmp)
+ ("libmnl", libmnl)
+ ("libnftnl", libnftnl)
+ ("readline", readline)))
+ (native-inputs `(("pkg-config", pkg-config)))
+ (home-page "http://www.nftables.org")
+ (synopsis "Userspace utility for Linux packet filtering")
+ (description "nftables is the project that aims to replace the existing
+{ip,ip6,arp,eb}tables framework. Basically, this project provides a new packet
+filtering framework, a new userspace utility and also a compatibility layer for
+{ip,ip6}tables. nftables is built upon the building blocks of the Netfilter
+infrastructure such as the existing hooks, the connection tracking system, the
+userspace queueing component and the logging subsystem.")
+ (license license:gpl2)))
+
(define-public proot
(package
(name "proot")
diff --git a/gnu/packages/markdown.scm b/gnu/packages/markup.scm
index 4a020198e4..cd883b23ec 100644
--- a/gnu/packages/markdown.scm
+++ b/gnu/packages/markup.scm
@@ -2,6 +2,7 @@
;;; Copyright © 2015 Mathieu Lirzin <mthl@openmailbox.org>
;;; Copyright © 2015 David Thompson <davet@gnu.org>
;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2017 ng0 <ng0@no-reply.pragmatique.xyz>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -18,7 +19,7 @@
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
-(define-module (gnu packages markdown)
+(define-module (gnu packages markup)
#:use-module (guix licenses)
#:use-module (guix download)
#:use-module (guix packages)
@@ -130,3 +131,39 @@ for parsing and rendering CommonMark.")
;; licensed. The CommonMark specification is Creative Commons CC-BY-SA 4.0
;; licensed. See 'COPYING' in the source distribution for more information.
(license (list bsd-2 expat cc-by-sa4.0))))
+
+(define-public smu
+ (package
+ (name "smu")
+ (version "1.4")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/Gottox/smu/archive/v"
+ version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "0iazl45rkz8ngsb5hpykl76w0ngvdvqqhym1qz5wykgmrzk293rp"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:make-flags (list "CC=gcc"
+ (string-append "PREFIX="
+ (assoc-ref %outputs "out")))
+ #:tests? #f ;No tests included
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure))))
+ (home-page "https://github.com/Gottox/smu")
+ (synopsis "Simple markup")
+ (description
+ "Smu is a very simple and minimal markup language. It is
+designed for using in wiki-like environments. Smu makes it very
+easy to write your documents on the fly and convert them into HTML.
+Smu is capable to parse very large documents. As long as you avoid an huge
+amount of indents it scales just great.
+
+Smu was started as a rewrite of Markdown but became something more
+lightweight and consistent. The biggest difference between Markdown
+and smu is that smu doesn't support reference style links.")
+ (license x11)))
diff --git a/gnu/packages/patches/artanis-fix-Makefile.in.patch b/gnu/packages/patches/artanis-fix-Makefile.in.patch
deleted file mode 100644
index 7e4800d364..0000000000
--- a/gnu/packages/patches/artanis-fix-Makefile.in.patch
+++ /dev/null
@@ -1,70 +0,0 @@
-Applies until an Artanis release comes with the following patches
-applied:
-* <https://savannah.gnu.org/patch/?func=detailitem&item_id=9130>
-* <https://savannah.gnu.org/patch/?func=detailitem&item_id=9131>
-diff -ru artanis-0.1.2/Makefile.in artanis-0.1.2.1/Makefile.in
---- artanis-0.1.2/Makefile.in 2016-02-10 12:35:18.800490571 -0200
-+++ artanis-0.1.2.1/Makefile.in 2016-10-15 19:44:35.140907367 -0300
-@@ -19,9 +19,18 @@
- MOD_OBJ := $(OBJ)/artanis
- BIN := bin
- TEMP_LIB_PATH := $(OBJ)
--MOD_PATH := $(shell guile -c "(display (%site-dir))")
- MOD_COMPILED_PATH := $(shell guile -c "(display (%site-ccache-dir))")
-+
-+ifdef DESTDIR
-+INFO_DIR := $(DESTDIR)/share/info/
-+MOD_PATH := $(DESTDIR)/$(shell guile -c "(display (%site-dir))")
- MOD_TARGET_PATH := $(DESTDIR)/$(MOD_COMPILED_PATH)
-+else
-+INFO_DIR := $(PREFIX)/share/info/
-+MOD_PATH := $(shell guile -c "(display (%site-dir))")
-+MOD_TARGET_PATH := $(MOD_COMPILED_PATH)
-+endif
-+
- GUILE_CFLAGS := -Wunsupported-warning -Wunbound-variable -Warity-mismatch -Wduplicate-case-datum -Wbad-case-datum -Wformat
- GUILEC := GUILE_LOAD_COMPILED_PATH=$(TEMP_LIB_PATH) guild compile $(GUILE_CFLAGS)
- ARTANIS_ETC := $(SRC)/etc/artanis
-@@ -36,7 +45,6 @@
- GENDOCS :=$(BUILD_AUX)/gendocs.sh
- CHK_TEXINFO := $(BUILD_AUX)/check_texinfo.scm
- CP := cp -frd -P
--INFO_DIR := $(PREFIX)/share/info/
- TARBALL_NAME := artanis-$(VERSION)
- TMP_DIR := $(shell mktemp -d)
- ANN_GEN := $(BUILD_AUX)/announce-gen
-@@ -124,18 +132,29 @@
- -rm -f config.{h,log}
-
- install: $(ALL_TARGETS)
-- mkdir -p $(DESTDIR)/$(MOD_PATH)
-- $(CP) $(MOD) $(DESTDIR)/$(MOD_PATH)/
-+ mkdir -p $(MOD_PATH)
-+ $(CP) $(MOD) $(MOD_PATH)/
- mkdir -p $(MOD_TARGET_PATH)/
- $(CP) $(MOD_OBJ) $(MOD_TARGET_PATH)/
-+
-+ifdef DESTDIR
- $(CP) $(ARTANIS_ETC) $(DESTDIR)/etc/
- $(CP) $(ARTANIS_PAGES) $(DESTDIR)/etc/artanis/
-- mkdir -p $(DESTDIR)/$(PREFIX)/bin/
-- $(CP) $(BIN)/art $(DESTDIR)/$(PREFIX)/bin/
-+ mkdir -p $(DESTDIR)/bin/
-+ $(CP) $(BIN)/art $(DESTDIR)/bin/
- mkdir -p $(DESTDIR)/etc/bash_completion.d/
- $(CP) $(CMDCOMP) $(DESTDIR)/etc/bash_completion.d/
-+else
-+ $(CP) $(ARTANIS_ETC) $(PREFIX)/etc/
-+ $(CP) $(ARTANIS_PAGES) $(PREFIX)/etc/artanis/
-+ mkdir -p $(PREFIX)/bin/
-+ $(CP) $(BIN)/art $(PREFIX)/bin/
-+ mkdir -p $(PREFIX)/etc/bash_completion.d/
-+ $(CP) $(CMDCOMP) $(PREFIX)/etc/bash_completion.d/
-+endif
-+
- if [ -e /etc/bash.bashrc ]; then source /etc/bash.bashrc; fi
-- if [ -e artanis.info ]; then mkdir -p $(DESTDIR)/$(INFO_DIR); $(CP) artanis.info $(DESTDIR)/$(INFO_DIR)/; fi
-+ if [ -e artanis.info ]; then mkdir -p $(INFO_DIR); $(CP) artanis.info $(INFO_DIR)/; fi
-
- distclean: distclean-mk clean clean-config clean-tarball
- -rm -f $(BIN)/art
diff --git a/gnu/packages/patches/raptor2-heap-overflow.patch b/gnu/packages/patches/raptor2-heap-overflow.patch
new file mode 100644
index 0000000000..ce2a4516f8
--- /dev/null
+++ b/gnu/packages/patches/raptor2-heap-overflow.patch
@@ -0,0 +1,51 @@
+This patch addresses two heap overflow bugs in raptor2:
+
+http://seclists.org/oss-sec/2017/q2/424
+
+Patch copied from libreoffice:
+
+https://github.com/LibreOffice/core/blob/master/external/redland/raptor/0001-Calcualte-max-nspace-declarations-correctly-for-XML-.patch.1
+
+From 590681e546cd9aa18d57dc2ea1858cb734a3863f Mon Sep 17 00:00:00 2001
+From: Dave Beckett <dave@dajobe.org>
+Date: Sun, 16 Apr 2017 23:15:12 +0100
+Subject: [PATCH] Calcualte max nspace declarations correctly for XML writer
+
+(raptor_xml_writer_start_element_common): Calculate max including for
+each attribute a potential name and value.
+
+Fixes Issues #0000617 http://bugs.librdf.org/mantis/view.php?id=617
+and #0000618 http://bugs.librdf.org/mantis/view.php?id=618
+---
+ src/raptor_xml_writer.c | 7 ++++---
+ 1 file changed, 4 insertions(+), 3 deletions(-)
+
+diff --git a/src/raptor_xml_writer.c b/src/raptor_xml_writer.c
+index 693b946..0d3a36a 100644
+--- a/src/raptor_xml_writer.c
++++ b/src/raptor_xml_writer.c
+@@ -181,9 +181,10 @@ raptor_xml_writer_start_element_common(raptor_xml_writer* xml_writer,
+ size_t nspace_declarations_count = 0;
+ unsigned int i;
+
+- /* max is 1 per element and 1 for each attribute + size of declared */
+ if(nstack) {
+- int nspace_max_count = element->attribute_count+1;
++ int nspace_max_count = element->attribute_count * 2; /* attr and value */
++ if(element->name->nspace)
++ nspace_max_count++;
+ if(element->declared_nspaces)
+ nspace_max_count += raptor_sequence_size(element->declared_nspaces);
+ if(element->xml_language)
+@@ -237,7 +238,7 @@ raptor_xml_writer_start_element_common(raptor_xml_writer* xml_writer,
+ }
+ }
+
+- /* Add the attribute + value */
++ /* Add the attribute's value */
+ nspace_declarations[nspace_declarations_count].declaration=
+ raptor_qname_format_as_xml(element->attributes[i],
+ &nspace_declarations[nspace_declarations_count].length);
+--
+2.9.3
+
diff --git a/gnu/packages/php.scm b/gnu/packages/php.scm
index 1b55cd4eb9..b6f64bc0ef 100644
--- a/gnu/packages/php.scm
+++ b/gnu/packages/php.scm
@@ -53,7 +53,7 @@
(define-public php
(package
(name "php")
- (version "7.1.5")
+ (version "7.1.6")
(home-page "https://secure.php.net/")
(source (origin
(method url-fetch)
@@ -61,7 +61,7 @@
name "-" version ".tar.xz"))
(sha256
(base32
- "1b7njiqgy66ga5c8wsm78mqqjr7lj3hlpwbbvksi2mn4jv1s6jfi"))
+ "0nr49gqhk4pv8kcdc60cl1mgwlinawpraq9ba15whzmb472lsn01"))
(modules '((guix build utils)))
(snippet
'(with-directory-excursion "ext"
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index 45fdca211c..88bcb9723e 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -533,26 +533,24 @@ John the Ripper).")
(define-public python-paramiko
(package
(name "python-paramiko")
- (version "1.17.4")
+ (version "2.1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "paramiko" version))
(sha256
(base32
- "1rs2qcmskcmq66q6g5al08wa41l9am0fad5r719m8wf91msyylqw"))))
+ "04734n0wy3hxk6rij4fr29in5jmr70nxpc7pqi2ksbjysfz4kbjz"))))
(build-system python-build-system)
(arguments
- '(;; FIXME: One test fails with "EOFError not raised by connect".
- #:tests? #f))
- ;; #:phases
- ;; (modify-phases %standard-phases
- ;; (replace 'check
- ;; (lambda _
- ;; (zero? (system* "python" "test.py")))))))
+ '(#:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda _
+ (zero? (system* "python" "test.py")))))))
(propagated-inputs
- `(("python-pycrypto" ,python-pycrypto)
- ("python-ecdsa" ,python-ecdsa)))
+ `(("python-pyasn1" ,python-pyasn1)
+ ("python-cryptography" ,python-cryptography)))
(home-page "http://www.paramiko.org/")
(synopsis "SSHv2 protocol library")
(description "Paramiko is a python implementation of the SSHv2 protocol,
diff --git a/gnu/packages/rdf.scm b/gnu/packages/rdf.scm
index 7b7fe60855..6b5cfb013c 100644
--- a/gnu/packages/rdf.scm
+++ b/gnu/packages/rdf.scm
@@ -53,6 +53,8 @@
(method url-fetch)
(uri (string-append "http://download.librdf.org/source/" name
"-" version ".tar.gz"))
+ (patches
+ (search-patches "raptor2-heap-overflow.patch"))
(sha256
(base32
"1vc02im4mpc28zxzgli68k6j0dakh0k3s389bm436yvqajxg19xd"))))
diff --git a/gnu/packages/serialization.scm b/gnu/packages/serialization.scm
index a6b5270199..6a3d8f900d 100644
--- a/gnu/packages/serialization.scm
+++ b/gnu/packages/serialization.scm
@@ -282,7 +282,7 @@ it a convenient format to store user input files.")
(define-public capnproto
(package
(name "capnproto")
- (version "0.6.0")
+ (version "0.6.1")
(source (origin
(method url-fetch)
(uri (string-append
@@ -290,7 +290,7 @@ it a convenient format to store user input files.")
version ".tar.gz"))
(sha256
(base32
- "0gpp1cxsb9nfd7qkjjykzknx03y0z0n4bq5q0fmxci7w38ci22g5"))))
+ "010s9yhq4531wvdfrdf2477zswhck6cjfby79w73rff3v06090l0"))))
(build-system gnu-build-system)
(arguments
`(#:phases
diff --git a/gnu/packages/shells.scm b/gnu/packages/shells.scm
index 5e04e86539..41d1758250 100644
--- a/gnu/packages/shells.scm
+++ b/gnu/packages/shells.scm
@@ -503,11 +503,11 @@ Its features include:
@end enumerate\n")
(license bsd-2)))
-(define-public s
+(define-public s-shell
(let ((commit "6604341edb3a775ff94415762af3ee9bd86bfb3c")
(revision "1"))
(package
- (name "s")
+ (name "s-shell")
(version (string-append "0.0.0-" revision "." (string-take commit 7)))
(source
(origin
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index b81bb42073..ae44bfb01f 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -5231,3 +5231,57 @@ devices that don't have Cairo's capabilities such as alpha support or
anti-aliasing. Backends are modular such that any subset of backends
is supported.")
(license license:gpl2)))
+
+(define-public r-lubridate
+ (package
+ (name "r-lubridate")
+ (version "1.6.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "lubridate" version))
+ (sha256
+ (base32
+ "0ci6rwij9i1inn840m0mlh1nqgh6vm2lada9kdnjpcjp5kyfv1qs"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-stringr" ,r-stringr)))
+ (home-page
+ "http://cran.r-project.org/web/packages/lubridate")
+ (synopsis "Make dealing with dates a little easier")
+ (description
+ "This package provides functions to work with date-times and time-spans:
+fast and user friendly parsing of date-time data, extraction and updating of
+components of a date-time (years, months, days, hours, minutes, and seconds),
+algebraic manipulation on date-time and time-span objects. The 'lubridate'
+package has a consistent and memorable syntax that makes working with dates
+easy and fun.")
+ (license license:gpl2)))
+
+(define-public r-fdrtool
+ (package
+ (name "r-fdrtool")
+ (version "1.2.15")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "fdrtool" version))
+ (sha256
+ (base32
+ "1h46frlk7d9f4qx0bg6p55nrm9wwwz2sv6d1nz7061wdfsm69yb5"))))
+ (build-system r-build-system)
+ (home-page "http://strimmerlab.org/software/fdrtool/")
+ (synopsis "Estimation of false discovery rates and higher criticism")
+ (description
+ "This package provides tools to estimate both tail area-based false
+discovery rates (Fdr) as well as local false discovery rates (fdr) for a
+variety of null models (p-values, z-scores, correlation coefficients,
+t-scores). The proportion of null values and the parameters of the null
+distribution are adaptively estimated from the data. In addition, the package
+contains functions for non-parametric density estimation (Grenander
+estimator), for monotone regression (isotonic regression and antitonic
+regression with weights), for computing the greatest convex minorant (GCM) and
+the least concave majorant (LCM), for the half-normal and correlation
+distributions, and for computing empirical higher criticism (HC) scores and
+the corresponding decision threshold.")
+ (license license:gpl3+)))
diff --git a/gnu/packages/tls.scm b/gnu/packages/tls.scm
index 23b04bad29..17cb2ac939 100644
--- a/gnu/packages/tls.scm
+++ b/gnu/packages/tls.scm
@@ -103,23 +103,15 @@ in intelligent transportation networks.")
(define-public p11-kit
(package
(name "p11-kit")
- (version "0.23.2")
+ (version "0.23.7")
(source
(origin
(method url-fetch)
- (uri (string-append "https://p11-glue.freedesktop.org/releases/p11-kit-"
- version ".tar.gz"))
+ (uri (string-append "https://github.com/p11-glue/p11-kit/releases/"
+ "download/" version "/p11-kit-" version ".tar.gz"))
(sha256
(base32
- "1w7szm190phlkg7qx05ychlj2dbvkgkhx9gw6dx4d5rw62l6wwms"))
- (modules '((guix build utils))) ; for substitute*
- (snippet
- '(begin
- ;; Drop one test that fails, also when trying to compile manually.
- ;; Reported upstream at
- ;; https://bugs.freedesktop.org/show_bug.cgi?id=89027
- (substitute* "Makefile.in"
- (("test-module\\$\\(EXEEXT\\) ") ""))))))
+ "0hdy4h8byvcvd4av504xqfqyd1h6xy914j034mq3c6v4ya37r3lq"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
@@ -478,25 +470,17 @@ security, and applying best practice development processes.")
(package
(name "python-acme")
;; Remember to update the hash of certbot when updating python-acme.
- (version "0.14.2")
+ (version "0.15.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "acme" version))
(sha256
(base32
- "1kbgpjabbly7r757vyr1050ixnm9hyvrbf9n6aq49cgmb147ysqn"))))
+ "11zwgj663vr575pbqw74ia10wxaw16i8rnkcivsrbsx148rxdbcz"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
- (add-after 'unpack 'patch-dependency
- ;; This module is part of the Python standard library, so we don't
- ;; need to use an external package.
- ;; https://github.com/certbot/certbot/pull/2249
- (lambda _
- (substitute* "setup.py"
- (("'argparse',") ""))
- #t))
(add-after 'build 'build-documentation
(lambda _
(zero? (system* "make" "-C" "docs" "man" "info"))))
@@ -543,7 +527,7 @@ security, and applying best practice development processes.")
(uri (pypi-uri name version))
(sha256
(base32
- "1b39hybswzm8mkarg1mwpx47wffqg57jcgi52mz5iz60rxym9j2v"))))
+ "1srvmjxz75dbafx7xfg1w3n9h3srr9p2ljnfsih9dwwd5cxh9i5q"))))
(build-system python-build-system)
(arguments
`(#:python ,python-2
diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm
index 4b3d83df28..8a91a97017 100644
--- a/gnu/packages/video.scm
+++ b/gnu/packages/video.scm
@@ -461,14 +461,14 @@ standards (MPEG-2, MPEG-4 ASP/H.263, MPEG-4 AVC/H.264, and VC-1/VMW3).")
(define-public ffmpeg
(package
(name "ffmpeg")
- (version "3.3.1")
+ (version "3.3.2")
(source (origin
(method url-fetch)
(uri (string-append "https://ffmpeg.org/releases/ffmpeg-"
version ".tar.xz"))
(sha256
(base32
- "0bwgm6z6k3khb91qh9xv15inykkfchpkm0lcdckkxhkacpyaf0mp"))))
+ "11974vcfsy8w0i6f4lfwqmg80xkfybqw7vw6zzrcn5i6ncddx60r"))))
(build-system gnu-build-system)
(inputs
`(("fontconfig" ,fontconfig)
@@ -2176,7 +2176,7 @@ many codecs and formats supported by libmediainfo.")
(source (origin
(method url-fetch)
(uri (string-append
- "http://www.live555.com/liveMedia/public/live."
+ "https://download.videolan.org/contrib/live555/live."
version ".tar.gz"))
(sha256
(base32
diff --git a/gnu/packages/xdisorg.scm b/gnu/packages/xdisorg.scm
index 3b06fbeb6b..d3f387e150 100644
--- a/gnu/packages/xdisorg.scm
+++ b/gnu/packages/xdisorg.scm
@@ -14,7 +14,7 @@
;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Leo Famulari <leo@famulari.name>
;;; Copyright © 2016 Alex Kost <alezost@gmail.com>
-;;; Copyright © 2016 Marius Bakke <mbakke@fastmail.com>
+;;; Copyright © 2016, 2017 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2016 Petter <petter@mykolab.ch>
;;; Copyright © 2017 Mekeor Melire <mekeor.melire@gmail.com>
;;; Copyright © 2017 ng0 <contact.ng0@cryptolab.net>
@@ -47,6 +47,7 @@
#:use-module (gnu packages)
#:use-module (gnu packages documentation)
#:use-module (gnu packages algebra)
+ #:use-module (gnu packages autotools)
#:use-module (gnu packages compression)
#:use-module (gnu packages image)
#:use-module (gnu packages pkg-config)
@@ -117,22 +118,29 @@ program.")
(define-public xclip
(package
(name "xclip")
- (version "0.12")
+ (version "0.13")
(source
(origin
(method url-fetch)
- (uri (string-append
- "mirror://sourceforge/" name "/" name "/" version "/"
- name "-" version ".tar.gz"))
+ (uri (string-append "https://github.com/astrand/xclip"
+ "/archive/" version ".tar.gz"))
(sha256
(base32
- "0ibcf46rldnv0r424qcnai1fa5iq3lm5q5rdd7snsi5sb78gmixp"))))
+ "0n7pczk9vv30zf8qfln8ba3hnif9yfdxg0m84djac469wc28hnya"))))
(build-system gnu-build-system)
(arguments
- '(#:tests? #f)) ; There is no test suite
+ '(#:tests? #f ; There is no test suite
+ #:phases
+ (modify-phases %standard-phases
+ ;; Since version 0.13, bootstrapped releases are no longer available.
+ (add-after 'unpack 'bootstrap
+ (lambda _ (zero? (system* "autoreconf" "-v")))))))
+ (native-inputs
+ `(("autoconf" ,autoconf)
+ ("automake" ,automake)))
(inputs `(("libxmu" ,libxmu)
("libxt" ,libxt)))
- (home-page "http://xclip.sourceforge.net/")
+ (home-page "https://github.com/astrand/xclip")
(synopsis "Command line interface to X11 clipboard")
(description "Xclip is a command line interface to the X11 clipboard. It
can also be used for copying files, as an alternative to sftp/scp, thus
@@ -441,7 +449,7 @@ of the screen selected by mouse.")
(define-public slop
(package
(name "slop")
- (version "6.3.41")
+ (version "6.3.43")
(source (origin
(method url-fetch)
(uri (string-append
@@ -450,7 +458,7 @@ of the screen selected by mouse.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "1yiv0ak1z7zbmcdw0dwx2gpblrh7l7s3l7y7sgpx071dy8s4rqpb"))))
+ "0kazcnnarc61d3rjysaym9vadf31wisfd3sn076rsjnsldm4y66h"))))
(build-system cmake-build-system)
(arguments
'(#:tests? #f)) ; no "check" target
diff --git a/gnu/packages/xorg.scm b/gnu/packages/xorg.scm
index 78717cc203..8ed608b216 100644
--- a/gnu/packages/xorg.scm
+++ b/gnu/packages/xorg.scm
@@ -2621,7 +2621,7 @@ as USB mice.")
(define-public xf86-video-ati
(package
(name "xf86-video-ati")
- (version "7.8.0")
+ (version "7.9.0")
(source
(origin
(method url-fetch)
@@ -2631,7 +2631,7 @@ as USB mice.")
".tar.bz2"))
(sha256
(base32
- "1ynnm4v4261xmg94b7jam9hjyym4n2nqba23rv23v3wjfbkms7s0"))))
+ "0xcq0lncb5p4sas5866qpkjyp1v8ksalw7m1gmqb3brhccp8gb9w"))))
(build-system gnu-build-system)
(inputs `(("mesa" ,mesa)
("xxf86driproto" ,xf86driproto)
@@ -3019,7 +3019,7 @@ graphics cards.")
(define-public xf86-video-openchrome
(package
(name "xf86-video-openchrome")
- (version "0.5.0")
+ (version "0.6.0")
(source
(origin
(method url-fetch)
@@ -3029,7 +3029,7 @@ graphics cards.")
".tar.bz2"))
(sha256
(base32
- "1fsmr455lk89zl795d6b5ypyqjim40j3h2vjch52lcssjw9xdza9"))))
+ "0x9gq3hw6k661k82ikd1y2kkk4dmgv310xr5q59dwn4k6z37aafs"))))
(build-system gnu-build-system)
(inputs `(("libx11" ,libx11)
("libxext" ,libxext)
generated by cgit v1.2.3 (git 2.45.0) at 2024-11-22 11:37:20 +0000