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-rw-r--r--gnu/packages/admin.scm121
-rw-r--r--gnu/packages/algebra.scm58
-rw-r--r--gnu/packages/backup.scm67
-rw-r--r--gnu/packages/bioinformatics.scm88
-rw-r--r--gnu/packages/bittorrent.scm9
-rw-r--r--gnu/packages/calendar.scm22
-rw-r--r--gnu/packages/cdrom.scm5
-rw-r--r--gnu/packages/code.scm4
-rw-r--r--gnu/packages/databases.scm16
-rw-r--r--gnu/packages/emacs.scm4
-rw-r--r--gnu/packages/fonts.scm71
-rw-r--r--gnu/packages/fontutils.scm44
-rw-r--r--gnu/packages/freedesktop.scm4
-rw-r--r--gnu/packages/ghostscript.scm7
-rw-r--r--gnu/packages/gnome.scm33
-rw-r--r--gnu/packages/gnu-doc.scm101
-rw-r--r--gnu/packages/gnucash.scm7
-rw-r--r--gnu/packages/gnunet.scm2
-rw-r--r--gnu/packages/gnupg.scm4
-rw-r--r--gnu/packages/gnustep.scm44
-rw-r--r--gnu/packages/gstreamer.scm45
-rw-r--r--gnu/packages/guile.scm7
-rw-r--r--gnu/packages/irc.scm4
-rw-r--r--gnu/packages/iso-codes.scm11
-rw-r--r--gnu/packages/kodi.scm1
-rw-r--r--gnu/packages/libusb.scm5
-rw-r--r--gnu/packages/linux.scm28
-rw-r--r--gnu/packages/mail.scm6
-rw-r--r--gnu/packages/maths.scm79
-rw-r--r--gnu/packages/mc.scm8
-rw-r--r--gnu/packages/miscfiles.scm47
-rw-r--r--gnu/packages/mpd.scm4
-rw-r--r--gnu/packages/music.scm51
-rw-r--r--gnu/packages/networking.scm44
-rw-r--r--gnu/packages/openstack.scm43
-rw-r--r--gnu/packages/package-management.scm37
-rw-r--r--gnu/packages/patches/libextractor-ffmpeg-3.patch360
-rw-r--r--gnu/packages/patches/mc-fix-ncurses-build.patch37
-rw-r--r--gnu/packages/patches/openssl-c-rehash.patch17
-rw-r--r--gnu/packages/patches/webkitgtk-2.4-sql-init-string.patch17
-rw-r--r--gnu/packages/patches/wicd-template-instantiation.patch29
-rw-r--r--gnu/packages/patches/wicd-wpa2-ttls.patch38
-rw-r--r--gnu/packages/perl.scm26
-rw-r--r--gnu/packages/python.scm274
-rw-r--r--gnu/packages/ruby.scm4
-rw-r--r--gnu/packages/scheme.scm39
-rw-r--r--gnu/packages/sdl.scm28
-rw-r--r--gnu/packages/statistics.scm88
-rw-r--r--gnu/packages/telephony.scm4
-rw-r--r--gnu/packages/texinfo.scm35
-rw-r--r--gnu/packages/textutils.scm21
-rw-r--r--gnu/packages/tls.scm86
-rw-r--r--gnu/packages/version-control.scm78
-rw-r--r--gnu/packages/video.scm12
-rw-r--r--gnu/packages/vim.scm15
-rw-r--r--gnu/packages/web.scm133
-rw-r--r--gnu/packages/webkit.scm10
-rw-r--r--gnu/packages/wicd.scm7
-rw-r--r--gnu/packages/wm.scm5
-rw-r--r--gnu/packages/xiph.scm4
60 files changed, 1799 insertions, 699 deletions
diff --git a/gnu/packages/admin.scm b/gnu/packages/admin.scm
index 69802e9a36..9636ee939f 100644
--- a/gnu/packages/admin.scm
+++ b/gnu/packages/admin.scm
@@ -3,7 +3,7 @@
;;; Copyright © 2013 Cyril Roelandt <tipecaml@gmail.com>
;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2014, 2015, 2016 Eric Bavier <bavier@member.fsf.org>
-;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
+;;; Copyright © 2015, 2016 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
;;; Copyright © 2015 Alex Sassmannshausen <alex.sassmannshausen@gmail.com>
;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
;;; Copyright © 2016 Leo Famulari <leo@famulari.name>
@@ -42,8 +42,10 @@
#:use-module (gnu packages ncurses)
#:use-module (gnu packages readline)
#:use-module (gnu packages linux)
+ #:use-module (gnu packages lua)
#:use-module (gnu packages guile)
#:use-module (gnu packages gettext)
+ #:use-module (gnu packages pcre)
#:use-module (gnu packages perl)
#:use-module (gnu packages tcl)
#:use-module (gnu packages compression)
@@ -53,6 +55,7 @@
#:use-module (gnu packages flex)
#:use-module (gnu packages glib)
#:use-module (gnu packages openldap)
+ #:use-module (gnu packages mcrypt)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages popt)
#:use-module (gnu packages texinfo)
@@ -66,6 +69,37 @@
#:use-module (gnu packages man)
#:use-module (gnu packages autotools))
+(define-public aide
+ (package
+ (name "aide")
+ (version "0.15.1")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "mirror://sourceforge/aide/aide/"
+ version "/aide-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1vsrc0s62kv1i84skm6k6zy868gayjck268qwj38rpspc8c5qgih"))))
+ (build-system gnu-build-system)
+ (native-inputs
+ `(("bison" ,bison)
+ ("flex" ,flex)))
+ (inputs
+ `(("libgcrypt" ,libgcrypt)
+ ("libgpg-error" ,libgpg-error)
+ ("libmhash" ,libmhash)
+ ("zlib" ,zlib)))
+ (synopsis "File and directory integrity checker")
+ (description
+ "AIDE (Advanced Intrusion Detection Environment) is a file and directory
+integrity checker. It creates a database from the regular expression rules
+that it finds from its configuration files. Once this database is initialized
+it can be used to verify the integrity of the files. It has several message
+digest algorithms that are used to check the integrity of files. All of the
+usual file attributes can be checked for inconsistencies.")
+ (home-page "http://aide.sourceforge.net/")
+ (license license:gpl2+)))
+
(define-public dmd
;; Deprecated. Kept around "just in case."
(let ((base-version "0.2")
@@ -109,14 +143,14 @@ interface and is based on GNU Guile.")
(define-public shepherd
(package
(name "shepherd")
- (version "0.3")
+ (version "0.3.1")
(source (origin
(method url-fetch)
(uri (string-append "ftp://alpha.gnu.org/gnu/dmd/shepherd-"
version ".tar.gz"))
(sha256
(base32
- "13mcy2131h7hggqvxbfxyrnbz46aaiaq2agng3x3f789a78n4mnn"))))
+ "0f3yi3n4sl9myiay95yhv2a9an338qddfjrbv7da753ip66dkfz6"))))
(build-system gnu-build-system)
(arguments
'(#:configure-flags '("--localstatedir=/var")))
@@ -157,14 +191,14 @@ graphs and can export its output to different formats.")
(define-public htop
(package
(name "htop")
- (version "2.0.0")
+ (version "2.0.1")
(source (origin
(method url-fetch)
(uri (string-append "http://hisham.hm/htop/releases/"
version "/htop-" version ".tar.gz"))
(sha256
(base32
- "1d944hn0ldxvxfrz9acr26lpmzlwj91m0s7x2xnivnfnmfha4p6i"))))
+ "0rjn9ybqx5sav7z4gn18f1q6k23nmqyb6yydfgghzdznz9nn447l"))))
(build-system gnu-build-system)
(inputs
`(("ncurses" ,ncurses)))
@@ -1497,3 +1531,80 @@ for writing audit records to the disk. Viewing the logs is done with the
@code{ausearch} or @code{aureport} utilities. Configuring the audit rules is
done with the @code{auditctl} utility.")
(license license:gpl2+)))
+
+(define-public nmap
+ (package
+ (name "nmap")
+ (version "7.11")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://nmap.org/dist/nmap-" version
+ ".tar.bz2"))
+ (sha256
+ (base32
+ "0jlmq1w0gjqpa7qa523kdj73ndm1xzww2wjvb94hxh6yalargyhk"))
+ (modules '((guix build utils)))
+ (snippet
+ '(map delete-file-recursively
+ ;; Remove bundled lua, pcap, and pcre libraries.
+ ;; FIXME: Remove bundled liblinear once packaged.
+ '("liblua"
+ "libpcap"
+ "libpcre"
+ ;; Remove pre-compiled binares.
+ "mswin32")))))
+ (build-system gnu-build-system)
+ (inputs
+ `(("openssl" ,openssl)
+ ("libpcap" ,libpcap)
+ ("pcre" ,pcre)
+ ("lua" ,lua)
+ ;; For 'ndiff'.
+ ("python" ,python-2)))
+
+ ;; TODO Add zenmap output.
+ (outputs '("out" "ndiff"))
+ (arguments
+ '(#:configure-flags '("--without-zenmap")
+ #:phases
+ (modify-phases %standard-phases
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (define (make out . args)
+ (unless (zero? (apply system* "make"
+ (string-append "prefix=" out)
+ args))
+ (error "make failed")))
+ (define (python-path dir)
+ (string-append dir "/lib/python2.7/site-packages"))
+ (let ((out (assoc-ref outputs "out"))
+ (ndiff (assoc-ref outputs "ndiff")))
+ (for-each mkdir-p (list out ndiff))
+ (make out
+ "install-nmap"
+ "install-nse"
+ "install-ncat"
+ "install-nping")
+ (make ndiff "install-ndiff")
+ (wrap-program (string-append ndiff "/bin/ndiff")
+ `("PYTHONPATH" prefix
+ (,(python-path ndiff)))))))
+ ;; These are the tests that do not require network access.
+ (replace 'check
+ (lambda _ (zero? (system* "make"
+ "check-nse"
+ "check-ndiff"
+ "check-dns")))))
+ ;; Nmap can't cope with out-of-source building.
+ #:out-of-source? #f))
+ (home-page "https://nmap.org/")
+ (synopsis "Network discovery and security auditing tool")
+ (description
+ "Nmap (\"Network Mapper\") is a network discovery and security auditing
+tool. It is also useful for tasks such as network inventory, managing service
+upgrade schedules, and monitoring host or service uptime. It also provides an
+advanced netcat implementation (ncat), a utility for comparing scan
+results (ndiff), and a packet generation and response analysis tool (nping).")
+ ;; This package uses nmap's bundled versions of libdnet and liblinear, which
+ ;; both use a 3-clause BSD license.
+ (license (list license:nmap license:bsd-3))))
diff --git a/gnu/packages/algebra.scm b/gnu/packages/algebra.scm
index 11fb460df5..a7455feb88 100644
--- a/gnu/packages/algebra.scm
+++ b/gnu/packages/algebra.scm
@@ -20,6 +20,7 @@
(define-module (gnu packages algebra)
#:use-module (gnu packages)
+ #:use-module (gnu packages autotools)
#:use-module (gnu packages compression)
#:use-module (gnu packages multiprecision)
#:use-module (gnu packages mpi)
@@ -133,17 +134,14 @@ solve the shortest vector problem.")
("readline" ,readline)))
(arguments
'(#:make-flags '("all")
- ;; FIXME: building the documentation requires tex; once this is
- ;; available, replace "gp" by "all"
#:test-target "dobench"
- #:phases
- (alist-replace
- 'configure
- (lambda* (#:key outputs #:allow-other-keys)
- (let ((out (assoc-ref outputs "out")))
- (zero?
- (system* "./Configure" (string-append "--prefix=" out)))))
- %standard-phases)))
+ #:phases (modify-phases %standard-phases
+ (replace 'configure
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let ((out (assoc-ref outputs "out")))
+ (zero?
+ (system* "./Configure"
+ (string-append "--prefix=" out)))))))))
(synopsis "PARI/GP, a computer algebra system for number theory")
(description
"PARI/GP is a widely used computer algebra system designed for fast
@@ -284,6 +282,46 @@ real and complex numbers, with automatic, rigorous error control.")
(license license:gpl2+)
(home-page "http://fredrikj.net/arb/")))
+(define-public ntl
+ (package
+ (name "ntl")
+ (version "9.7.0")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "http://shoup.net/ntl/ntl-"
+ version ".tar.gz"))
+ (sha256 (base32
+ "115frp5flyvw9wghz4zph1b3llmr5nbxk1skgsggckr81fh3gmxq"))))
+ (build-system gnu-build-system)
+ (native-inputs
+ `(("libtool" ,libtool)
+ ("perl" ,perl))) ; for configuration
+ ;; FIXME: Add optional input gf2x once available; then also add
+ ;; configure flag "NTL_GF2X_LIB=on".
+ (inputs
+ `(("gmp" ,gmp)))
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (replace 'configure
+ (lambda* (#:key outputs #:allow-other-keys)
+ (chdir "src")
+ (system* "./configure"
+ (string-append "PREFIX=" (assoc-ref outputs "out"))
+ ;; Do not build especially for the build machine.
+ "NATIVE=off"
+ ;; Also do not tune to the build machine.
+ "WIZARD=off"
+ "SHARED=on")
+ #t)))))
+ (synopsis "C++ library for number theory")
+ (description
+ "NTL is a C++ library providing data structures and algorithms
+for manipulating signed, arbitrary length integers, and for vectors,
+matrices, and polynomials over the integers and over finite fields.")
+ (license license:gpl2+)
+ (home-page "http://shoup.net/ntl/")))
+
(define-public bc
(package
(name "bc")
diff --git a/gnu/packages/backup.scm b/gnu/packages/backup.scm
index aa8ccbce69..ec95769a5e 100644
--- a/gnu/packages/backup.scm
+++ b/gnu/packages/backup.scm
@@ -1,7 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014, 2015 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2014 Ian Denhardt <ian@zenhack.net>
-;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
+;;; Copyright © 2015, 2016 Leo Famulari <leo@famulari.name>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -348,8 +348,16 @@ rdiff-backup is easy to use and settings have sensible defaults.")
(inputs
`(("acl" ,acl)
("openssl" ,openssl)
- ("python-llfuse" ,python-llfuse)
- ("python-msgpack" ,python-msgpack)))
+ ("python-msgpack" ,python-msgpack)
+
+ ;; Attic is probably incompatible with llfuse > 0.41.
+ ;; These links are to discussions of llfuse compatibility from
+ ;; the borg project. Borg is a recent fork of attic, and attic
+ ;; has not been updated since the fork, so it's likely that
+ ;; llfuse compatibility requirements are still the same.
+ ;; https://github.com/borgbackup/borg/issues/642
+ ;; https://github.com/borgbackup/borg/issues/643
+ ("python-llfuse" ,python-llfuse-0.41)))
(synopsis "Deduplicating backup program")
(description "Attic is a deduplicating backup program. The main goal of
Attic is to provide an efficient and secure way to backup data. The data
@@ -398,3 +406,56 @@ compression, and more. The library itself implements storage techniques such
as content-addressable storage, content hash keys, Merkle trees, similarity
detection, and lossless compression.")
(license license:gpl3+)))
+
+(define-public borg
+ (package
+ (name "borg")
+ (version "1.0.0")
+ (source (origin
+ (method url-fetch)
+ (uri (pypi-uri "borgbackup" version))
+ (sha256
+ (base32
+ "0wa6cvqs3rni5nwrgagigchcly8a53rxk56z0zn8iaii2cqrw2sh"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'set-env
+ (lambda* (#:key inputs #:allow-other-keys)
+ (let ((openssl (assoc-ref inputs "openssl"))
+ (lz4 (assoc-ref inputs "lz4")))
+ (setenv "BORG_OPENSSL_PREFIX" openssl)
+ (setenv "BORG_LZ4_PREFIX" lz4)
+ (setenv "PYTHON_EGG_CACHE" "/tmp")
+ #t)))
+ (add-after 'install 'install-doc
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (man (string-append out "/share/man/man1")))
+ (and
+ (zero? (system* "python3" "setup.py" "build_ext" "--inplace"))
+ (zero? (system* "make" "-C" "docs" "man"))
+ (begin
+ (install-file "docs/_build/man/borg.1" man)
+ #t))))))))
+ (native-inputs
+ `(("python-setuptools-scm" ,python-setuptools-scm)
+ ;; For generating the documentation.
+ ("python-sphinx" ,python-sphinx)
+ ("python-sphinx-rtd-theme" ,python-sphinx-rtd-theme)))
+ (inputs
+ `(("acl" ,acl)
+ ("lz4" ,lz4)
+ ("openssl" ,openssl)
+ ("python-llfuse" ,python-llfuse)
+ ("python-msgpack" ,python-msgpack)))
+ (synopsis "Deduplicated, encrypted, authenticated and compressed backups")
+ (description "Borg is a deduplicating backup program. Optionally, it
+supports compression and authenticated encryption. The main goal of Borg is to
+provide an efficient and secure way to backup data. The data deduplication
+technique used makes Borg suitable for daily backups since only changes are
+stored. The authenticated encryption technique makes it suitable for backups
+to not fully trusted targets. Borg is a fork of Attic.")
+ (home-page "https://borgbackup.github.io/borgbackup/")
+ (license license:bsd-3)))
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 281bd1f427..0afc0a6979 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4,6 +4,7 @@
;;; Copyright © 2015, 2016 Pjotr Prins <pjotr.guix@thebird.nl>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2016 Roel Janssen <roel@gnu.org>
+;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -2507,16 +2508,13 @@ interrupted by stop codons. OrfM finds and prints these ORFs.")
(define-public python2-pbcore
(package
(name "python2-pbcore")
- (version "0.9.3")
+ (version "1.2.8")
(source (origin
(method url-fetch)
- (uri (string-append
- "https://github.com/PacificBiosciences/pbcore/archive/"
- version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
+ (uri (pypi-uri "pbcore" version))
(sha256
(base32
- "1z46rwjac93jm87cbj2zgjg6qvsgs65140wkbbxsvxps7ai4pm09"))))
+ "02pfn5raa3zf739672bg0dkx7z3j2c4nx7vmpfjqy5b12jrqpymk"))))
(build-system python-build-system)
(arguments `(#:python ,python-2)) ; pbcore requires Python 2.7
(inputs
@@ -2525,7 +2523,10 @@ interrupted by stop codons. OrfM finds and prints these ORFs.")
("python-pysam" ,python2-pysam)
("python-h5py" ,python2-h5py)))
(native-inputs
- `(("python-setuptools" ,python2-setuptools)))
+ `(("python-docutils" ,python2-docutils)
+ ("python-nose" ,python2-nose)
+ ("python-setuptools" ,python2-setuptools)
+ ("python-sphinx" ,python2-sphinx)))
(home-page "http://pacificbiosciences.github.io/pbcore/")
(synopsis "Library for reading and writing PacBio data files")
(description
@@ -3691,15 +3692,15 @@ Cuffdiff or Ballgown programs.")
(define-public vcftools
(package
(name "vcftools")
- (version "0.1.12b")
+ (version "0.1.14")
(source (origin
(method url-fetch)
(uri (string-append
- "mirror://sourceforge/vcftools/vcftools_"
- version ".tar.gz"))
+ "https://github.com/vcftools/vcftools/releases/download/v"
+ version "/vcftools-" version ".tar.gz"))
(sha256
(base32
- "148al9h7f8g8my2qdnpax51kdd2yjrivlx6frvakf4lz5r8j88wx"))))
+ "10l5c07z9p4i9pr4gl54b2c9h6ndhqlbq1rashg2zcgwkbfrkmvn"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no "check" target
@@ -3707,18 +3708,13 @@ Cuffdiff or Ballgown programs.")
"CFLAGS=-O2" ; override "-m64" flag
(string-append "PREFIX=" (assoc-ref %outputs "out"))
(string-append "MANDIR=" (assoc-ref %outputs "out")
- "/share/man/man1"))
- #:phases
- (alist-cons-after
- 'unpack 'patch-manpage-install
- (lambda _
- (substitute* "Makefile"
- (("cp \\$\\{PREFIX\\}/cpp/vcftools.1") "cp ./cpp/vcftools.1")))
- (alist-delete 'configure %standard-phases))))
+ "/share/man/man1"))))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)))
(inputs
`(("perl" ,perl)
("zlib" ,zlib)))
- (home-page "http://vcftools.sourceforge.net/")
+ (home-page "https://vcftools.github.io/")
(synopsis "Tools for working with VCF files")
(description
"VCFtools is a program package designed for working with VCF files, such
@@ -3726,7 +3722,7 @@ as those generated by the 1000 Genomes Project. The aim of VCFtools is to
provide easily accessible methods for working with complex genetic variation
data in the form of VCF files.")
;; The license is declared as LGPLv3 in the README and
- ;; at http://vcftools.sourceforge.net/license.html
+ ;; at https://vcftools.github.io/license.html
(license license:lgpl3)))
(define-public vsearch
@@ -3927,8 +3923,7 @@ barplots or heatmaps.")
(base32
"0f16ryy5f012hvksrwlmm33bcl7lw97i2jvhbnwfwl03j4w7nhc1"))))
(properties
- `((upstream-name . "BiocGenerics")
- (r-repository . bioconductor)))
+ `((upstream-name . "BiocGenerics")))
(build-system r-build-system)
(home-page "http://bioconductor.org/packages/BiocGenerics")
(synopsis "S4 generic functions for Bioconductor")
@@ -3970,8 +3965,7 @@ abnormal copy number.")
(base32
"12iibcs63m9iy7f45wgjcqsna2dnqwckphk682389grshz0g4x66"))))
(properties
- `((upstream-name . "S4Vectors")
- (r-repository . bioconductor)))
+ `((upstream-name . "S4Vectors")))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)))
@@ -3998,8 +3992,7 @@ S4Vectors package itself.")
(base32
"0hi5k1j5jm4xrg1l506g279qw1xkvp1gg1zgsjzpbng4vx4k4iyl"))))
(properties
- `((upstream-name . "IRanges")
- (r-repository . bioconductor)))
+ `((upstream-name . "IRanges")))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
@@ -4020,16 +4013,15 @@ possible.")
(define-public r-genomeinfodb
(package
(name "r-genomeinfodb")
- (version "1.6.1")
+ (version "1.6.3")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "GenomeInfoDb" version))
(sha256
(base32
- "1j2n1v1mrw1fxn7cyffz112pm76wd6gy9q9qwlsfv3brbsqbvdbf"))))
+ "1ggp005n2rlkad00ilzn95y4rd484yr1chdhnd6fwg45rbi94d63"))))
(properties
- `((upstream-name . "GenomeInfoDb")
- (r-repository . bioconductor)))
+ `((upstream-name . "GenomeInfoDb")))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
@@ -4055,8 +4047,7 @@ names in their natural, rather than lexicographic, order.")
(base32
"0havwyr6xqk7w0rmbwfj9jq1djz7wzdz7w39adhklwzwz9l4ih3a"))))
(properties
- `((upstream-name . "XVector")
- (r-repository . bioconductor)))
+ `((upstream-name . "XVector")))
(build-system r-build-system)
(arguments
`(#:phases
@@ -4084,16 +4075,15 @@ names in their natural, rather than lexicographic, order.")
(define-public r-genomicranges
(package
(name "r-genomicranges")
- (version "1.22.2")
+ (version "1.22.4")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "GenomicRanges" version))
(sha256
(base32
- "1jffvcs0jsi7q4l3pvjj6r73vll80csgkljvhqp0g2ixc43jjng9"))))
+ "02df5683nrpn9d10ws8jz9b55nr9055hh882xp2i154xdddir0k0"))))
(properties
- `((upstream-name . "GenomicRanges")
- (r-repository . bioconductor)))
+ `((upstream-name . "GenomicRanges")))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
@@ -4215,13 +4205,13 @@ objects.")
(define-public r-biostrings
(package
(name "r-biostrings")
- (version "2.38.2")
+ (version "2.38.4")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "Biostrings" version))
(sha256
(base32
- "1afp9szc8ci6jn0m3hrrqh6df65cpw3v1dcnl6xir3d3m3lwwmk4"))))
+ "0cjd7i4bdwabzb02gm753aji5xaihkj5ak8nb0d32cclxbj0hp33"))))
(properties
`((upstream-name . "Biostrings")))
(build-system r-build-system)
@@ -4285,13 +4275,13 @@ files.")
(define-public r-summarizedexperiment
(package
(name "r-summarizedexperiment")
- (version "1.0.1")
+ (version "1.0.2")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "SummarizedExperiment" version))
(sha256
(base32
- "0w1dwp99p6i7sc3cn0ir3dr8ksgxwjf16675h5i8n6gbv4rl9lz6"))))
+ "1gpmh1mi70m5k5qnyjs1h0qn8ajrzalzic7k3762xchxsmmdvxn4"))))
(properties
`((upstream-name . "SummarizedExperiment")))
(build-system r-build-system)
@@ -4314,13 +4304,13 @@ samples.")
(define-public r-genomicalignments
(package
(name "r-genomicalignments")
- (version "1.6.1")
+ (version "1.6.3")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "GenomicAlignments" version))
(sha256
(base32
- "03pxzkmwcpl0d7a09ahan0nllfv7qw2i7w361w6af2s4n3xwrniz"))))
+ "02b9j1pfd39bkvb623k5k0ziq9rpw093hifqw65vb954dwj29jhd"))))
(properties
`((upstream-name . "GenomicAlignments")))
(build-system r-build-system)
@@ -4347,13 +4337,13 @@ alignments.")
(define-public r-rtracklayer
(package
(name "r-rtracklayer")
- (version "1.30.1")
+ (version "1.30.4")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "rtracklayer" version))
(sha256
(base32
- "1if31hg56islx5vwydpgs5gkyas26kyvv2ljv1c7jikpm62w14qv"))))
+ "0knjnwywh9k726mq28s3sy013zhw6d6nfa8hfw670720nq18i2p0"))))
(build-system r-build-system)
(arguments
`(#:phases
@@ -4392,13 +4382,13 @@ as well as query and modify the browser state, such as the current viewport.")
(define-public r-genomicfeatures
(package
(name "r-genomicfeatures")
- (version "1.22.7")
+ (version "1.22.13")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "GenomicFeatures" version))
(sha256
(base32
- "1jb4s49ar5j9qslpd3kfdg2wrl4q7ciysd55h9a7zvspymxcngq8"))))
+ "0n3rkj66la6wizgcsf2rmwcsyfxz9kv5zak337lmk1raqfnancz4"))))
(properties
`((upstream-name . "GenomicFeatures")))
(build-system r-build-system)
@@ -4582,13 +4572,13 @@ reference point and sorted by a user defined feature.")
(define-public r-genomation
(package
(name "r-genomation")
- (version "1.2.1")
+ (version "1.2.2")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "genomation" version))
(sha256
(base32
- "1mzs995snwim13qk9kz4q3nczpnbsy1allwp4whfq0cflg2mndfr"))))
+ "0kvzwc21zsh2c8d34yn935ncn38bfkpzmknycd8h7b0521x20mi9"))))
(build-system r-build-system)
(propagated-inputs
`(("r-biostrings" ,r-biostrings)
diff --git a/gnu/packages/bittorrent.scm b/gnu/packages/bittorrent.scm
index a930eabaf6..26b0fc6fdc 100644
--- a/gnu/packages/bittorrent.scm
+++ b/gnu/packages/bittorrent.scm
@@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014 Taylan Ulrich Bayirli/Kammer <taylanbayirli@gmail.com>
-;;; Copyright © 2014, 2015 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2016 Leo Famulari <leo@famulari.name>
;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;;
@@ -73,7 +73,12 @@
(mkdir-p (string-append gui "/bin"))
(rename-file (string-append out "/bin/transmission-gtk")
(string-append gui
- "/bin/transmission-gtk"))))
+ "/bin/transmission-gtk"))
+
+ ;; Move the '.desktop' file as well.
+ (mkdir (string-append gui "/share"))
+ (rename-file (string-append out "/share/applications")
+ (string-append gui "/share/applications"))))
%standard-phases)))
(inputs
`(("inotify-tools" ,inotify-tools)
diff --git a/gnu/packages/calendar.scm b/gnu/packages/calendar.scm
index 2e4481f94b..5ef5ec9271 100644
--- a/gnu/packages/calendar.scm
+++ b/gnu/packages/calendar.scm
@@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015 David Thompson <davet@gnu.org>
-;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
+;;; Copyright © 2015, 2016 Leo Famulari <leo@famulari.name>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -79,12 +79,25 @@ data units.")
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
- ;; Bug reported: https://github.com/geier/khal/issues/309
- (add-after 'unpack 'disable-test
+ (add-after 'unpack 'disable-tests
(lambda _
+ ;; Bug reported for test_only_update_old_event:
+ ;; https://github.com/geier/khal/issues/309
(substitute* "tests/khalendar_test.py"
(("test_only_update_old_event")
- "disabled_only_update_old_event"))))
+ "disabled_only_update_old_event"))
+
+ ;; Bug reported for test_dt_two_tz:
+ ;; https://github.com/pimutils/khal/issues/382
+ (substitute* "tests/event_test.py"
+ (("test_dt_two_tz")
+ "disabled_dt_two_tz"))
+ ;; Another timezone / DST issue:
+ ;; https://github.com/pimutils/khal/issues/146
+ (substitute* "tests/event_test.py"
+ (("test_raw_dt")
+ "disabled_raw_dt"))))
+
;; Building the manpage requires khal to be installed.
(add-after 'install 'manpage
(lambda* (#:key outputs #:allow-other-keys)
@@ -95,6 +108,7 @@ data units.")
(install-file
"doc/build/man/khal.1"
(string-append (assoc-ref outputs "out") "/share/man/man1"))))
+
;; The tests require us to choose a timezone.
(replace 'check
(lambda* (#:key inputs #:allow-other-keys)
diff --git a/gnu/packages/cdrom.scm b/gnu/packages/cdrom.scm
index 050f8c68ac..46a5b234aa 100644
--- a/gnu/packages/cdrom.scm
+++ b/gnu/packages/cdrom.scm
@@ -233,13 +233,14 @@ capacity is user-selectable.")
(version "1.4.0")
(source (origin
(method url-fetch)
- (uri (string-append "https://github.com/lipnitsk/libcue/archive/v"
+ (uri (string-append "https://github.com/lipnitsk/libcue/releases/"
+ "download/v" version "/libcue-"
version ".tar.bz2"))
(sha256
(base32
"17kjd7rjz1bvfn44n3n2bjb7a1ywd0yc0g4sqp5ihf9b5bn7cwlb"))))
(build-system gnu-build-system)
- (home-page "http://libcue.sourceforge.net/")
+ (home-page "https://github.com/lipnitsk/libcue")
(synopsis "C library to parse cue sheets")
(description "Libcue is a C library to parse so-called @dfn{cue sheets}
which contain meta-data for CD/DVD tracks. It provides an API to manipulate
diff --git a/gnu/packages/code.scm b/gnu/packages/code.scm
index 0bc1a7d33b..af671d5780 100644
--- a/gnu/packages/code.scm
+++ b/gnu/packages/code.scm
@@ -92,14 +92,14 @@ highlighting your own code that seemed comprehensible when you wrote it.")
(define-public global ; a global variable
(package
(name "global")
- (version "6.5.2")
+ (version "6.5.4")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnu/global/global-"
version ".tar.gz"))
(sha256
(base32
- "07qx3dbjwkbd1dn42qs7zgj77rxdj2psfrf7bx7yx9al38f87z60"))))
+ "19hxajpwld6qx0faz4rzyh1hfs25ycjmws6bas8pavx4hskf05mg"))))
(build-system gnu-build-system)
(inputs `(("ncurses" ,ncurses)
("libltdl" ,libltdl)
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm
index 71ad77b9be..0ca6fd8986 100644
--- a/gnu/packages/databases.scm
+++ b/gnu/packages/databases.scm
@@ -274,15 +274,25 @@ as a drop-in replacement of MySQL.")
(define-public postgresql
(package
(name "postgresql")
- (version "9.5.1")
+ (version "9.5.2")
(source (origin
(method url-fetch)
- (uri (string-append "http://ftp.postgresql.org/pub/source/v"
+ (uri (string-append "https://ftp.postgresql.org/pub/source/v"
version "/postgresql-" version ".tar.bz2"))
(sha256
(base32
- "1ljvijaja5zy4i5b1450drbj8m3fcm3ly1zzaakp75x30s2rsc3b"))))
+ "0hbwwhh0pz0a6vf8j5bskiq7gmz9rwc9ywcqyhg5asshckj35lgq"))))
(build-system gnu-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-before 'configure 'patch-/bin/sh
+ (lambda _
+ ;; Refer to the actual shell.
+ (substitute* '("src/bin/pg_ctl/pg_ctl.c"
+ "src/bin/psql/command.c")
+ (("/bin/sh") (which "sh")))
+ #t)))))
(inputs
`(("readline" ,readline)
("zlib" ,zlib)))
diff --git a/gnu/packages/emacs.scm b/gnu/packages/emacs.scm
index 215061a67a..db5668e1fc 100644
--- a/gnu/packages/emacs.scm
+++ b/gnu/packages/emacs.scm
@@ -370,7 +370,7 @@ on stdout instead of using a socket as the Emacsclient does.")
(define-public magit
(package
(name "magit")
- (version "2.5.0")
+ (version "2.6.0")
(source (origin
(method url-fetch)
(uri (string-append
@@ -378,7 +378,7 @@ on stdout instead of using a socket as the Emacsclient does.")
version "/" name "-" version ".tar.gz"))
(sha256
(base32
- "0i6qpx5szzc4kyfcdhaic8gif0sqdqcya1niyj93lpvw66jcxsxa"))))
+ "04km5j6118yqz7h3dyfd4ijjd6w3pb76pjlaj25wh1bchf1yilir"))))
(build-system gnu-build-system)
(native-inputs `(("texinfo" ,texinfo)
("emacs" ,emacs-no-x)))
diff --git a/gnu/packages/fonts.scm b/gnu/packages/fonts.scm
index 8aa5a0dc33..65d53896e8 100644
--- a/gnu/packages/fonts.scm
+++ b/gnu/packages/fonts.scm
@@ -33,10 +33,12 @@
#:use-module (guix build-system trivial)
#:use-module (gnu packages base)
#:use-module (gnu packages compression)
- #:use-module (gnu packages zip)
+ #:use-module (gnu packages fontutils)
#:use-module (gnu packages perl)
+ #:use-module (gnu packages pkg-config)
+ #:use-module (gnu packages python)
#:use-module (gnu packages xorg)
- #:use-module (gnu packages pkg-config))
+ #:use-module (gnu packages zip))
(define-public font-inconsolata
(package
@@ -260,47 +262,44 @@ sans-serif designed for on-screen reading. It is used by GNOME@tie{}3.")
(define-public font-gnu-freefont-ttf
(package
(name "font-gnu-freefont-ttf")
- (version "20100919")
+ (version "20120503")
(source (origin
(method url-fetch)
- (uri (string-append "mirror://gnu/freefont/freefont-ttf-"
+ (uri (string-append "mirror://gnu/freefont/freefont-src-"
version ".tar.gz"))
(sha256
(base32
- "1q3h5jp1mbdkinkwxy0lfd0a1q7azlbagraydlzaa2ng82836wg4"))))
- (build-system trivial-build-system)
+ "0yk58blhcd4hm7nyincmqq4jrzjjk82wif2zmk1l3y2m4vif4qhd"))))
+ (build-system gnu-build-system)
(arguments
- `(#:modules ((guix build utils))
- #:builder (begin
- (use-modules (guix build utils)
- (srfi srfi-26))
-
- (let ((tar (string-append (assoc-ref %build-inputs
- "tar")
- "/bin/tar"))
- (PATH (string-append (assoc-ref %build-inputs
- "gzip")
- "/bin"))
- (font-dir (string-append %output
- "/share/fonts/truetype"))
- (doc-dir (string-append %output "/share/doc/"
- ,name "-" ,version)))
- (setenv "PATH" PATH)
- (system* tar "xvf" (assoc-ref %build-inputs "source"))
-
- (mkdir-p font-dir)
- (mkdir-p doc-dir)
- (chdir (string-append "freefont-" ,version))
- (for-each (lambda (file)
- (let ((dir (if (string-suffix? "ttf" file)
- font-dir
- doc-dir)))
+ `(#:phases (modify-phases %standard-phases
+ (delete 'configure)
+ (replace 'install
+ (lambda _
+ (let ((doc-dir (string-append %output "/share/doc/"
+ ,name "-" ,version))
+ (font-dir (string-append %output
+ "/share/fonts/truetype")))
+ (mkdir-p doc-dir)
+ (substitute* "Makefile"
+ (("\\$\\(TMPDIR\\)") doc-dir)
+ (("sfd/\\*.ttf") ""))
+ (system* "make" "ttftar")
+ (mkdir-p font-dir)
+ (for-each (lambda (file)
(copy-file file
- (string-append dir "/" file))))
- (find-files "." ""))))))
- (native-inputs `(("source" ,source)
- ("tar" ,tar)
- ("gzip" ,gzip)))
+ (string-append font-dir "/"
+ (basename file))))
+ (filter
+ (lambda (file) (string-suffix? "ttf" file))
+ (find-files "." "")))))))
+ #:test-target "tests"))
+ ;; replace python 3 with python 2
+ ;; python 3 support commits aren't yet released in 20120503
+ ;; so freefont needs python 2 support in fontforge
+ (native-inputs `(("fontforge" ,(package (inherit fontforge)
+ (inputs `(("python-2" ,python-2)
+ ,@(package-inputs fontforge)))))))
(home-page "http://www.gnu.org/software/freefont/")
(synopsis "Unicode-encoded outline fonts")
(description
diff --git a/gnu/packages/fontutils.scm b/gnu/packages/fontutils.scm
index 2912ce2366..8d33211fb6 100644
--- a/gnu/packages/fontutils.scm
+++ b/gnu/packages/fontutils.scm
@@ -208,9 +208,8 @@ applications should be.")
(define-public graphite2
(package
- (replacement graphite2-1.3.6)
(name "graphite2")
- (version "1.3.5")
+ (version "1.3.6")
(source
(origin
(method url-fetch)
@@ -218,8 +217,8 @@ applications should be.")
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32
- "0jrjb56zim57xg2pckfdyrw46c624mqz9zywgwza0g1bxg26940w"))))
+ (base32
+ "1frd9mjaqzvh9gs74ngc43igi53vzjzlwr5chbrs6ii1hc4aa23s"))))
(build-system cmake-build-system)
(native-inputs
`(("python" ,python-2) ; because of "import imap" in tests
@@ -235,21 +234,6 @@ and returns a sequence of positioned glyphids from the font.")
(license license:lgpl2.1+)
(home-page "https://github.com/silnrsi/graphite")))
-(define graphite2-1.3.6
- (package
- (inherit graphite2)
- (replacement #f)
- (source
- (let ((name "graphite2") (version "1.3.6"))
- (origin
- (method url-fetch)
- (uri (string-append "https://github.com/silnrsi/graphite/archive/"
- version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
- (sha256
- (base32
- "1frd9mjaqzvh9gs74ngc43igi53vzjzlwr5chbrs6ii1hc4aa23s")))))))
-
(define-public potrace
(package
(name "potrace")
@@ -367,14 +351,20 @@ definitions.")
"0gfcm8yn1d30giqhdwbchnfnspcqypqdzrxlhqhwy1i18wgl0v2v"))
(modules '((guix build utils)))
(snippet
- ;; Make builds bit-reproducible by using fixed date strings.
- '(substitute* "configure"
- (("^FONTFORGE_MODTIME=.*$")
- "FONTFORGE_MODTIME=\"1458399002\"\n")
- (("^FONTFORGE_MODTIME_STR=.*$")
- "FONTFORGE_MODTIME_STR=\"15:50 CET 19-Mar-2016\"\n")
- (("^FONTFORGE_VERSIONDATE=.*$")
- "FONTFORGE_VERSIONDATE=\"20160319\"\n")))))
+ '(begin
+ ;; Make builds bit-reproducible by using fixed date strings.
+ (substitute* "configure"
+ (("^FONTFORGE_MODTIME=.*$")
+ "FONTFORGE_MODTIME=\"1458399002\"\n")
+ (("^FONTFORGE_MODTIME_STR=.*$")
+ "FONTFORGE_MODTIME_STR=\"15:50 CET 19-Mar-2016\"\n")
+ (("^FONTFORGE_VERSIONDATE=.*$")
+ "FONTFORGE_VERSIONDATE=\"20160319\"\n"))
+
+ ;; Make TTF builds bit-reproducible by clearing the timestamp
+ ;; that goes in TTF files.
+ (substitute* "fontforge/tottf.c"
+ (("cvt_unix_to_1904\\(now") "cvt_unix_to_1904(0"))))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
diff --git a/gnu/packages/freedesktop.scm b/gnu/packages/freedesktop.scm
index 972eafc669..24c4564689 100644
--- a/gnu/packages/freedesktop.scm
+++ b/gnu/packages/freedesktop.scm
@@ -508,7 +508,7 @@ which speak the Qualcomm MSM Interface (QMI) protocol.")
(define-public modem-manager
(package
(name "modem-manager")
- (version "1.4.12")
+ (version "1.4.14")
(source (origin
(method url-fetch)
(uri (string-append
@@ -516,7 +516,7 @@ which speak the Qualcomm MSM Interface (QMI) protocol.")
"ModemManager-" version ".tar.xz"))
(sha256
(base32
- "1cvhpkbdch9a77sdir0wcks45m2zlvq1sna2ly2v4lx9fm9h7xby"))))
+ "18hvffwcncwz14kdzk42jbkh362n0kjv3kgx7axbqx572pawvrmb"))))
(build-system gnu-build-system)
(arguments
'(#:configure-flags
diff --git a/gnu/packages/ghostscript.scm b/gnu/packages/ghostscript.scm
index d2eb066817..88f24209c8 100644
--- a/gnu/packages/ghostscript.scm
+++ b/gnu/packages/ghostscript.scm
@@ -64,7 +64,10 @@ Consortium standard (ICC), approved as ISO 15076-1.")
(source (origin
(method url-fetch)
(uri (string-append
- "http://ftp.de.debian.org/debian/pool/main/libp/libpaper/libpaper_"
+ ;; Debian moved their libpaper-1.1.24 to archive.debian.net
+ ;; but in the move the hash of their tarball changed.
+ "http://pkgs.fedoraproject.org/repo/pkgs/libpaper/libpaper_"
+ version ".tar.gz/5bc87d494ba470aba54f6d2d51471834/libpaper_"
version ".tar.gz"))
(sha256 (base32
"0zhcx67afb6b5r936w5jmaydj3ks8zh83n9rm5sv3m3k8q8jib1q"))))
@@ -75,7 +78,7 @@ Consortium standard (ICC), approved as ISO 15076-1.")
way for applications to take actions based on a system- or user-specified
paper size.")
(license license:gpl2)
- (home-page "http://packages.qa.debian.org/libp/libpaper.html")))
+ (home-page "https://packages.qa.debian.org/libp/libpaper.html")))
(define-public psutils
(package
diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm
index eebb547de3..5c2cf0197e 100644
--- a/gnu/packages/gnome.scm
+++ b/gnu/packages/gnome.scm
@@ -14,6 +14,7 @@
;;; Copyright © 2015, 2016 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Rene Saavedra <rennes@openmailbox.org>
;;; Copyright © 2016 Jochem Raat <jchmrt@riseup.net>
+;;; Copyright © 2016 Rene Saavedra <rennes@openmailbox.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -4208,7 +4209,7 @@ users.")
(define-public network-manager
(package
(name "network-manager")
- (version "1.0.10")
+ (version "1.0.12")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnome/sources/NetworkManager/"
@@ -4216,7 +4217,7 @@ users.")
"NetworkManager-" version ".tar.xz"))
(sha256
(base32
- "1g4z2wg036n0njqp8fycrisj46l3yda6pl00l4rg9nfz862cxkqv"))))
+ "17jan0g5jzp8mrpklyacwdgnnw016m1c5pc4az5im6qhc260yirs"))))
(build-system gnu-build-system)
(outputs '("out"
"doc")) ; 8 MiB of gtk-doc HTML
@@ -4928,3 +4929,31 @@ command-line interface. It can record part or all of an X display for a
specified duration and save it as a GIF encoded animated image file.")
(home-page "https://git.gnome.org/browse/byzanz")
(license license:gpl2+))))
+
+(define-public libzapojit
+ (package
+ (name "libzapojit")
+ (version "0.0.3")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "mirror://gnome/sources/" name "/"
+ (version-major+minor version) "/"
+ name "-" version ".tar.xz"))
+ (sha256
+ (base32
+ "0zn3s7ryjc3k1abj4k55dr2na844l451nrg9s6cvnnhh569zj99x"))))
+ (build-system gnu-build-system)
+ (native-inputs
+ `(("gobject-introspection" ,gobject-introspection)
+ ("intltool" ,intltool)
+ ("pkg-config" ,pkg-config)))
+ (inputs
+ `(("gnome-online-accounts" ,gnome-online-accounts)
+ ("json-glib" ,json-glib)
+ ("rest" ,rest)))
+ (home-page "https://wiki.gnome.org/Projects/Zapojit")
+ (synopsis "Library for accessing SkyDrive and Hotmail")
+ (description
+ "Libzapojit is a GLib-based library for accessing online service APIs of
+Microsoft SkyDrive and Hotmail, using their REST protocols.")
+ (license license:lgpl2.1+)))
diff --git a/gnu/packages/gnu-doc.scm b/gnu/packages/gnu-doc.scm
new file mode 100644
index 0000000000..3daa54ff12
--- /dev/null
+++ b/gnu/packages/gnu-doc.scm
@@ -0,0 +1,101 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2014 John Darrington <jmd@gnu.org>
+;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gnu packages gnu-doc)
+ #:use-module (gnu packages base)
+ #:use-module (gnu packages compression)
+ #:use-module (gnu packages texinfo)
+
+ #:use-module (guix build-system gnu)
+ #:use-module (guix build-system trivial)
+ #:use-module (guix cvs-download)
+ #:use-module (guix download)
+ #:use-module (guix licenses)
+ #:use-module (guix packages))
+
+(define-public miscfiles
+ (package
+ (name "miscfiles")
+ (version "1.5")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "mirror://gnu/" name "/" name "-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "005588vfrwx8ghsdv9p7zczj9lbc9a3r4m5aphcaqv8gif4siaka"))))
+ (build-system gnu-build-system)
+ (home-page "https://www.gnu.org/software/miscfiles/")
+ (synopsis
+ "Data files for airport codes, zip codes, a dictionary, and more")
+ (description
+ "GNU Miscfiles is a collection of common data files. They include, for
+example, country abbreviations, names and capital cities; currency
+abbreviations and names; a Best Current Practices index; a map of the ASCII
+character set; a list of three-letter airport codes; and an English word
+list.")
+ (license gpl2+)))
+
+(define-public gnu-standards
+ (package
+ (name "gnu-standards")
+ (version "2016-03-25")
+ (source
+ (origin
+ (method cvs-fetch)
+ (uri (cvs-reference
+ (root-directory
+ ":pserver:anonymous@cvs.savannah.gnu.org:/sources/gnustandards")
+ (module "gnustandards")
+ (revision "2016-03-25")))
+ (sha256
+ (base32
+ "0qn7mzdjqwc6h9prin22x6kj9iqipxpbzldzhmis7q4x4hpi61vj"))))
+ (build-system trivial-build-system)
+ (native-inputs `(("gzip" ,gzip)
+ ("source" ,source)
+ ("texinfo" ,texinfo)))
+ (arguments
+ `(#:modules ((guix build utils))
+ #:builder
+ (begin
+ (use-modules (guix build utils))
+ (let ((gzip (assoc-ref %build-inputs "gzip"))
+ (source (assoc-ref %build-inputs "source"))
+ (texinfo (assoc-ref %build-inputs "texinfo"))
+ (info-dir (string-append %output "/share/info")))
+ (setenv "PATH" (string-append gzip "/bin"
+ ":" texinfo "/bin"))
+ (mkdir-p info-dir)
+ (system* "makeinfo" "--output" info-dir
+ (string-append source "/maintain.texi"))
+ (system* "makeinfo" "--output" info-dir
+ (string-append source "/standards.texi"))
+ (system* "gzip" (string-append info-dir "/maintain.info"))
+ (system* "gzip" (string-append info-dir "/standards.info"))))))
+ (home-page "http://www.gnu.org/prep/standards/")
+ (synopsis "GNU coding standards and maintainer information")
+ (description "The GNU Coding Standards were written by Richard Stallman
+and other GNU Project volunteers. Their purpose is to make the GNU system
+clean, consistent, and easy to install.
+
+The information for maintainers of GNU software has guidelines and advice for
+someone who is the maintainer of a GNU program on behalf of the GNU Project.")
+ (license fdl1.3+)))
diff --git a/gnu/packages/gnucash.scm b/gnu/packages/gnucash.scm
index e252f98f94..58d3bda561 100644
--- a/gnu/packages/gnucash.scm
+++ b/gnu/packages/gnucash.scm
@@ -1,6 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015 Eric Bavier <bavier@member.fsf.org>
+;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -37,7 +38,7 @@
(define-public gnucash
(package
(name "gnucash")
- (version "2.6.9")
+ (version "2.6.12")
(source
(origin
(method url-fetch)
@@ -45,7 +46,7 @@
version ".tar.bz2"))
(sha256
(base32
- "0iw25l1kv60cg6fd2vg11mcvzmjqnc5p9lp3rjy06ghkjfrn3and"))
+ "0x84f07p30pwhriamv8ifljgw755cj87rc12jy1xddf47spyj7rp"))
(patches (list (search-patch "gnucash-price-quotes-perl.patch")))))
(build-system gnu-build-system)
(inputs
@@ -97,7 +98,7 @@
"gnc-fq-check"
"gnc-fq-helper"
"gnc-fq-dump")))))))
- (home-page "https://gnu.org/software/gnucash")
+ (home-page "http://www.gnucash.org/")
(synopsis "Personal and small business financial accounting software")
(description
"GnuCash is personal and professional financial-accounting software.
diff --git a/gnu/packages/gnunet.scm b/gnu/packages/gnunet.scm
index eb0c4cbe83..471f383b85 100644
--- a/gnu/packages/gnunet.scm
+++ b/gnu/packages/gnunet.scm
@@ -5,6 +5,7 @@
;;; Copyright © 2015 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Ni* Gillmann <ng@niasterisk.space>
;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2016 Mark H Weaver <mhw@netris.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -66,6 +67,7 @@
(sha256
(base32
"0zvv7wd011npcx7yphw9bpgivyxz6mlp87a57n96nv85k96dd2l6"))
+ (patches (list (search-patch "libextractor-ffmpeg-3.patch")))
(modules '((guix build utils)))
(snippet
;; Nowadays libmagic (from 'file') returns 'audio/ogg' and not
diff --git a/gnu/packages/gnupg.scm b/gnu/packages/gnupg.scm
index 350865addb..c3b859b7a2 100644
--- a/gnu/packages/gnupg.scm
+++ b/gnu/packages/gnupg.scm
@@ -248,14 +248,14 @@ libskba (working with X.509 certificates and CMS data).")
(define-public gnupg-2.0
(package (inherit gnupg)
- (version "2.0.29")
+ (version "2.0.30")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnupg/gnupg/gnupg-" version
".tar.bz2"))
(sha256
(base32
- "1jaakn0mi6pi2b3g3imxj3qzxw2zg0ifxs30baq2b157dcw6pvb8"))))
+ "0wax4cy14hh0h7kg9hj0hjn9424b71z8lrrc5kbsasrn9xd7hag3"))))
(native-inputs '())
(inputs
`(("adns" ,adns)
diff --git a/gnu/packages/gnustep.scm b/gnu/packages/gnustep.scm
index edd159d262..ae97eb7936 100644
--- a/gnu/packages/gnustep.scm
+++ b/gnu/packages/gnustep.scm
@@ -1,5 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2016 Kei Yamashita <kei@openmailbox.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -22,6 +23,10 @@
#:use-module (guix build-system gnu)
#:use-module (guix licenses)
#:use-module (gnu packages xorg)
+ #:use-module (gnu packages gnome)
+ #:use-module (gnu packages texinfo)
+ #:use-module (gnu packages autotools)
+ #:use-module (gnu packages glib)
#:use-module (gnu packages fontutils)
#:use-module (gnu packages image)
#:use-module (gnu packages pkg-config))
@@ -83,3 +88,42 @@ interface. It is fast, feature rich, easy to configure, and easy to use.")
;; Artwork is distributed under the WTFPL.
(license gpl2+)))
+
+(define-public wmbattery
+ (package
+ (name "wmbattery")
+ (version "2.50")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append
+ "mirror://debian/pool/main/w/wmbattery/wmbattery_"
+ version ".orig.tar.gz"))
+ (sha256
+ (base32
+ "0hi6bivv3xd2k68w08krndfl68wdx7nmc2wjzsmcd4q3qgwgyk44"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:tests? #f ; no "check" target
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'autoconf
+ (lambda _ (zero? (system* "autoreconf" "-vfi")))))))
+ (inputs
+ `(("glib" ,glib)
+ ("libx11" ,libx11)
+ ("libxext" ,libxext)
+ ("libxpm" ,libxpm)
+ ("upower" ,upower)))
+ (native-inputs
+ `(("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("pkg-config" ,pkg-config)))
+ (home-page "http://windowmaker.org/dockapps/?name=wmbattery")
+ (synopsis "Display laptop battery info")
+ (description
+ "Wmbattery displays the status of your laptop's battery in a small icon.
+This includes if it is plugged in, if the battery is charging, how many minutes
+of battery life remain, battery life remaining (with both a percentage and a
+graph), and battery status (high - green, low - yellow, or critical - red).")
+ (license gpl2)))
+
diff --git a/gnu/packages/gstreamer.scm b/gnu/packages/gstreamer.scm
index 59b1076294..97900958c8 100644
--- a/gnu/packages/gstreamer.scm
+++ b/gnu/packages/gstreamer.scm
@@ -3,6 +3,7 @@
;;; Copyright © 2014 John Darrington <jmd@gnu.org>
;;; Copyright © 2015, 2016 Sou Bunnbu <iyzsong@gmail.com>
;;; Copyright © 2015 Mark H Weaver <mhw@netris.org>
+;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -96,7 +97,7 @@ arrays of data.")
(define-public gstreamer
(package
(name "gstreamer")
- (version "1.6.3")
+ (version "1.8.0")
(source
(origin
(method url-fetch)
@@ -105,7 +106,7 @@ arrays of data.")
version ".tar.xz"))
(sha256
(base32
- "093zldafh7xh3lrlwzm7j0vvjz6k9ca83wqil40gfz5qcy6mdy92"))))
+ "1p5y9bbrhywng0prmpxv29p6jsz6vd039d49bnc98p9b45532yll"))))
(build-system gnu-build-system)
(outputs '("out" "doc"))
(arguments
@@ -144,7 +145,7 @@ This package provides the core library and elements.")
(define-public gst-plugins-base
(package
(name "gst-plugins-base")
- (version "1.6.3")
+ (version "1.8.0")
(source
(origin
(method url-fetch)
@@ -152,7 +153,7 @@ This package provides the core library and elements.")
name "-" version ".tar.xz"))
(sha256
(base32
- "0xbskifk95rw7jd85sqjrmqh2kys1bpi0inrxyapx1x4vf7ly5dn"))))
+ "08hmg7fp519wim1fm04r7f2q2020ssdninawqsbrqjsvs70srh5b"))))
(build-system gnu-build-system)
(outputs '("out" "doc"))
(propagated-inputs
@@ -186,7 +187,7 @@ This package provides the core library and elements.")
(lambda _
(substitute* "tests/check/libs/pbutils.c"
(("/bin/sh") (which "sh"))))))))
- (home-page "http://gstreamer.freedesktop.org/")
+ (home-page "https://gstreamer.freedesktop.org/")
(synopsis
"Plugins for the GStreamer multimedia library")
(description "This package provides an essential exemplary set of plug-ins
@@ -197,7 +198,7 @@ for the GStreamer multimedia library.")
(define-public gst-plugins-good
(package
(name "gst-plugins-good")
- (version "1.6.3")
+ (version "1.8.0")
(source
(origin
(method url-fetch)
@@ -206,7 +207,7 @@ for the GStreamer multimedia library.")
name "-" version ".tar.xz"))
(sha256
(base32
- "0xx16h0q63gs3pxlzdflnpyssba3vcrh1qnzplg4d0ra1fvrvc94"))))
+ "0kczdvqxvl8kxiy2d7czv16jp73hv9k3nykh47ckihnv8x6i6362"))))
(build-system gnu-build-system)
(inputs
`(("aalib" ,aalib)
@@ -237,16 +238,18 @@ for the GStreamer multimedia library.")
`(#:phases
(modify-phases %standard-phases
(add-after
- 'unpack 'disable-failing-rtprtx-tests
+ 'unpack 'disable-failing-tests
(lambda _
- ;; Disable rtprtx tests that frequently fail.
- ;; XXX FIXME: Try removing this for version > 1.6.3.
+ ;; Disable tests that fail non-deterministically.
+ ;; XXX FIXME: Try removing this for version > 1.8.0.
(substitute* "tests/check/elements/rtprtx.c"
- (("tcase_add_test \\(tc_chain,\
- (test_rtxsender_max_size_packets|test_rtxreceive_data_reconstruction)\\);" all)
+ (("tcase_add_test \\(tc_chain, test_push_forward_seq\\);" all)
+ (string-append "/* " all " */")))
+ (substitute* "tests/check/elements/splitmux.c"
+ (("tcase_add_test \\(tc_chain, test_splitmuxsink\\);" all)
(string-append "/* " all " */")))
#t)))))
- (home-page "http://gstreamer.freedesktop.org/")
+ (home-page "https://gstreamer.freedesktop.org/")
(synopsis
"Plugins for the GStreamer multimedia library")
(description "GStreamer Good Plug-ins is a set of plug-ins for the
@@ -330,7 +333,7 @@ par compared to the rest.")
(define-public gst-plugins-ugly
(package
(name "gst-plugins-ugly")
- (version "1.6.3")
+ (version "1.8.0")
(source
(origin
(method url-fetch)
@@ -338,7 +341,7 @@ par compared to the rest.")
name "/" name "-" version ".tar.xz"))
(sha256
(base32
- "0r6h3ys5n90jv3c06crxzcac561z07s4h04hy5i8ybw8qyvzgv1g"))))
+ "137b6kqykh5nwbmiv28nn1pc1d2x2rb2xxg382pc9pa9gpxpyrak"))))
(build-system gnu-build-system)
(inputs
`(("gst-plugins-base" ,gst-plugins-base)
@@ -358,7 +361,7 @@ par compared to the rest.")
`(("glib:bin" ,glib "bin")
("pkg-config" ,pkg-config)
("python-wrapper" ,python-wrapper)))
- (home-page "http://gstreamer.freedesktop.org/")
+ (home-page "https://gstreamer.freedesktop.org/")
(synopsis "GStreamer plugins from the \"ugly\" set")
(description "GStreamer Ugly Plug-ins. This set contains those plug-ins
which the developers consider to have good quality code but that might pose
@@ -368,7 +371,7 @@ distribution problems in some jurisdictions, e.g. due to patent threats.")
(define-public gst-libav
(package
(name "gst-libav")
- (version "1.6.3")
+ (version "1.8.0")
(source (origin
(method url-fetch)
(uri (string-append
@@ -376,7 +379,7 @@ distribution problems in some jurisdictions, e.g. due to patent threats.")
name "-" version ".tar.xz"))
(sha256
(base32
- "1aylbg1xnm68c3wc49mzx813qhsjfg23hqnjqqwdwdq31839qyw5"))))
+ "0719njp8aarhvn038pijq6dmsnli0zlg146hyfs3rsdffs4f472s"))))
(build-system gnu-build-system)
(arguments
'(#:configure-flags '("--with-system-libav")
@@ -405,7 +408,7 @@ compression formats through the use of the libav library.")
(define-public python-gst
(package
(name "python-gst")
- (version "1.6.2")
+ (version "1.8.0")
(source (origin
(method url-fetch)
(uri (string-append
@@ -413,7 +416,7 @@ compression formats through the use of the libav library.")
"gst-python-" version ".tar.xz"))
(sha256
(base32
- "09ci5zvr7lms7mvgbjgsjwaxcl4nq45n1g9pdwnqmx3rf0qkwxjf"))))
+ "1spn49x7yaj69df6mxh9wwcs0y3abswkfpk84njs71lzqlbzyiff"))))
(build-system gnu-build-system)
(arguments
;; XXX: Factorize python-sitedir with python-build-system.
@@ -435,7 +438,7 @@ compression formats through the use of the libav library.")
(propagated-inputs
`(("gst-plugins-base" ,gst-plugins-base)
("python-pygobject" ,python-pygobject)))
- (home-page "http://gstreamer.freedesktop.org/")
+ (home-page "https://gstreamer.freedesktop.org/")
(synopsis "GStreamer GObject Introspection overrides for Python")
(description
"This package contains GObject Introspection overrides for Python that can
diff --git a/gnu/packages/guile.scm b/gnu/packages/guile.scm
index 882a62d09f..fe043cba0b 100644
--- a/gnu/packages/guile.scm
+++ b/gnu/packages/guile.scm
@@ -275,14 +275,14 @@ without requiring the source code to be rewritten.")
(define-public artanis
(package
(name "artanis")
- (version "0.1.0")
+ (version "0.1.2")
(source (origin
(method url-fetch)
(uri (string-append "ftp://alpha.gnu.org/gnu/artanis/artanis-"
version ".tar.gz"))
(sha256
(base32
- "1mc2zy6n9wnn4hzi3zp3jd6b5rlr0lv7fvh800xf4fyrxg0zia4g"))))
+ "19m3ak12cqk8js9d2mdg11kh4fjsq8frfpd10qw75h0zpr5cywpp"))))
(build-system gnu-build-system)
;; TODO: Add guile-dbi and guile-dbd optional dependencies.
(inputs `(("guile" ,guile-2.0)))
@@ -296,7 +296,8 @@ without requiring the source code to be rewritten.")
(dir (string-append out "/share/guile/site/2.0")))
;; Don't use (%site-dir) for site paths.
(list (string-append "MOD_PATH=" dir)
- (string-append "MOD_COMPILED_PATH=" dir)))
+ (string-append "MOD_COMPILED_PATH=" dir)
+ (string-append "DESTDIR=" out)))
#:test-target "test"
#:phases
(modify-phases %standard-phases
diff --git a/gnu/packages/irc.scm b/gnu/packages/irc.scm
index ba5b9e26ae..a17330ec63 100644
--- a/gnu/packages/irc.scm
+++ b/gnu/packages/irc.scm
@@ -92,7 +92,7 @@ irssi, but graphical.")
(define-public irssi
(package
(name "irssi")
- (version "0.8.18")
+ (version "0.8.19")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/irssi/irssi/"
@@ -100,7 +100,7 @@ irssi, but graphical.")
version ".tar.xz"))
(sha256
(base32
- "0h3q0p5rnm6h0hcv06m8vrs97kyr1l7snjdy3qbjsz3m97vpg8f0"))))
+ "1lz57v3nkki30lb883pipp5syyfkssvjlq3xxf9yl578902h982c"))))
(build-system gnu-build-system)
(arguments
`(#:phases
diff --git a/gnu/packages/iso-codes.scm b/gnu/packages/iso-codes.scm
index be0b746796..0a9427cef2 100644
--- a/gnu/packages/iso-codes.scm
+++ b/gnu/packages/iso-codes.scm
@@ -1,5 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2013 Cyril Roelandt <tipecaml@gmail.com>
+;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -28,21 +29,21 @@
(define-public iso-codes
(package
(name "iso-codes")
- (version "3.49")
+ (version "3.67")
(source (origin
(method url-fetch)
(uri (string-append
- "http://pkg-isocodes.alioth.debian.org/downloads/iso-codes-"
+ "https://pkg-isocodes.alioth.debian.org/downloads/iso-codes-"
version ".tar.xz"))
(sha256
(base32
- "1ryk5i467p7xxrbrqynb35ci046yj9k9b4d3hfxzass962lz9q04"))))
+ "037hmfs5pk3g36psm378vap1mbrkk86vv8wsdnv65mzbnph52gv0"))))
(build-system gnu-build-system)
(inputs
`(("gettext" ,gnu-gettext)
("perl" ,perl)
- ("python-2" ,python-2)))
- (home-page "http://pkg-isocodes.alioth.debian.org/")
+ ("python" ,python-wrapper)))
+ (home-page "https://pkg-isocodes.alioth.debian.org/")
(synopsis "Various ISO standards")
(description
"This package provides lists of various ISO standards (e.g. country,
diff --git a/gnu/packages/kodi.scm b/gnu/packages/kodi.scm
index 6975443646..0c30aa1977 100644
--- a/gnu/packages/kodi.scm
+++ b/gnu/packages/kodi.scm
@@ -80,6 +80,7 @@
(uri (git-reference
(url "https://github.com/graeme-hill/crossguid.git")
(commit commit)))
+ (file-name (string-append name "-" version "-checkout"))
(sha256
(base32
"1i29y207qqddvaxbn39pk2fbh3gx8zvdprfp35wasj9rw2wjk3s9"))))
diff --git a/gnu/packages/libusb.scm b/gnu/packages/libusb.scm
index 266669061e..c3427e7f6f 100644
--- a/gnu/packages/libusb.scm
+++ b/gnu/packages/libusb.scm
@@ -3,6 +3,7 @@
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2015 Andy Wingo <wingo@igalia.com>
;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -126,14 +127,14 @@ proposed for standardization.")
(define-public gmtp
(package
(name "gmtp")
- (version "1.3.9")
+ (version "1.3.10")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/gmtp/" version
"/gmtp-" version ".tar.gz"))
(sha256
(base32
- "0bdxvi0jf3q870a39xzsaj4qrjwc9b5bgvc95plc7xb6vf2m7zsv"))))
+ "0fyi3pdl2g57vr0p46ip2wwzyap3l0by7iqaqygv0yxfcs79l6xj"))))
(build-system glib-or-gtk-build-system)
(arguments
'(#:configure-flags
diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm
index 53d13d5b57..0eb379eb77 100644
--- a/gnu/packages/linux.scm
+++ b/gnu/packages/linux.scm
@@ -9,6 +9,7 @@
;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org>
;;; Copyright © 2016 Tobias Geerinckx-Rice <tobias.geerinckx.rice@gmail.com>
;;; Copyright © 2016 Alex Kost <alezost@gmail.com>
+;;; Copyright © 2016 Raymond Nicholson <rain1@openmailbox.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -223,6 +224,10 @@ for SYSTEM and optionally VARIANT, or #f if there is no such configuration."
(let* ((version "4.5")
(build-phase
'(lambda* (#:key system inputs #:allow-other-keys #:rest args)
+ ;; Avoid introducing timestamps
+ (setenv "KCONFIG_NOTIMESTAMP" "1")
+ (setenv "KBUILD_BUILD_TIMESTAMP" (getenv "SOURCE_DATE_EPOCH"))
+
;; Apply the neat patch.
(system* "patch" "-p1" "--force"
"-i" (assoc-ref inputs "patch/freedo+gnu"))
@@ -348,13 +353,13 @@ It has been modified to remove all non-free binary blobs.")
(define-public linux-libre-4.1
(package
(inherit linux-libre)
- (version "4.1.19")
+ (version "4.1.20")
(source (origin
(method url-fetch)
(uri (linux-libre-urls version))
(sha256
(base32
- "0xkj94xmnmxr768qp6n68r1g68ix1sds95nv6zfg4x8fc7fzn8km"))))
+ "0vwk6jh57djbwr29xvlgaf14409bq9vmwf6r6nq9jdl6dizfd110"))))
(native-inputs
(let ((conf (kernel-config (or (%current-target-system)
(%current-system))
@@ -1581,7 +1586,6 @@ from the module-init-tools project.")
(define-public eudev
;; The post-systemd fork, maintained by Gentoo.
- ;; TODO: Merge with 'eudev-with-blkid' below at an opportune time.
(package
(name "eudev")
(version "3.1.5")
@@ -1600,7 +1604,11 @@ from the module-init-tools project.")
("perl" ,perl)
("gperf" ,gperf)))
(inputs
- `(("kmod" ,kmod)))
+ ;; When linked against libblkid, eudev can populate /dev/disk/by-label
+ ;; and similar; it also installs the '60-persistent-storage.rules' file,
+ ;; which contains the rules to do that.
+ `(("util-linux" ,util-linux) ;for blkid
+ ("kmod" ,kmod)))
(home-page "https://wiki.gentoo.org/wiki/Project:Eudev")
(synopsis "Userspace device management")
(description "Udev is a daemon which dynamically creates and removes
@@ -1608,18 +1616,6 @@ device nodes from /dev/, handles hotplug events and loads drivers at boot
time.")
(license license:gpl2+)))
-(define-public eudev-with-blkid
- ;; TODO: Merge with 'eudev' above at an opportune time.
- (package
- (inherit eudev)
- (name "eudev-with-blkid")
- (inputs
- ;; When linked against libblkid, eudev can populate /dev/disk/by-label
- ;; and similar; it also installs the '60-persistent-storage.rules' file,
- ;; which contains the rules to do that.
- `(("util-linux" ,util-linux) ;for blkid
- ,@(package-inputs eudev)))))
-
(define-public lvm2
(package
(name "lvm2")
diff --git a/gnu/packages/mail.scm b/gnu/packages/mail.scm
index 5bb633d66f..7bcb93cbc6 100644
--- a/gnu/packages/mail.scm
+++ b/gnu/packages/mail.scm
@@ -177,18 +177,19 @@ aliasing facilities to work just as they would on normal mail.")
(define-public mutt
(package
(name "mutt")
- (version "1.5.24")
+ (version "1.6.0")
(source (origin
(method url-fetch)
(uri (string-append "ftp://ftp.mutt.org/pub/mutt/mutt-"
version ".tar.gz"))
(sha256
(base32
- "0012njrgxf1barjksqkx7ccid2l0xyikhna9mjs9vcfpbrvcm4m2"))
+ "06bc2drbgalkk68rzg7hq2v5m5qgjxff5357wg0419dpi8ivdbr9"))
(patches (list (search-patch "mutt-store-references.patch")))))
(build-system gnu-build-system)
(inputs
`(("cyrus-sasl" ,cyrus-sasl)
+ ("gdbm" ,gdbm)
("gpgme" ,gpgme)
("ncurses" ,ncurses)
("openssl" ,openssl)
@@ -198,6 +199,7 @@ aliasing facilities to work just as they would on normal mail.")
"--enable-imap"
"--enable-pop"
"--enable-gpgme"
+ "--enable-hcache" ; for header caching
"--with-ssl"
"--with-sasl"
;; so that mutt does not check whether the path
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 6d3d134c20..adebf09a32 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2013, 2014, 2015 Andreas Enge <andreas@enge.fr>
+;;; Copyright © 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2013 Nikita Karetnikov <nikita@karetnikov.org>
;;; Copyright © 2014 John Darrington <jmd@gnu.org>
;;; Copyright © 2014, 2015, 2016 Eric Bavier <bavier@member.fsf.org>
@@ -52,7 +52,6 @@
#:use-module (gnu packages gcc)
#:use-module (gnu packages gd)
#:use-module (gnu packages ghostscript)
- #:use-module (gnu packages glib)
#:use-module (gnu packages gtk)
#:use-module (gnu packages image)
#:use-module (gnu packages less)
@@ -177,7 +176,7 @@ numbers.")
(define-public glpk
(package
(name "glpk")
- (version "4.59")
+ (version "4.60")
(source
(origin
(method url-fetch)
@@ -185,7 +184,7 @@ numbers.")
version ".tar.gz"))
(sha256
(base32
- "1bpbp5z0378kaj5bqmc5m2j5h9c7553p0s2j6a28badqghpbx673"))))
+ "15z2ymzqhxwss6wgdj5f7vkyqlqdsjgrvm0x871kmlx0n0664mhk"))))
(build-system gnu-build-system)
(inputs
`(("gmp" ,gmp)))
@@ -201,45 +200,57 @@ translator for the language. In addition to the C library, a stand-alone
LP/MIP solver is included in the package.")
(license license:gpl3+)))
-(define-public pspp
+(define-public 4ti2
(package
- (name "pspp")
- (version "0.8.5")
+ (name "4ti2")
+ (version "1.6.7")
(source
(origin
(method url-fetch)
- (uri (string-append "mirror://gnu/pspp/pspp-"
- version ".tar.gz"))
+ (uri (string-append "http://www.4ti2.de/version_" version
+ "/4ti2-" version ".tar.gz"))
(sha256
(base32
- "0c8326yykidi94xi7jn27j8iqxc38vc07d4wf5zyk0l8lpzx5vz7"))))
+ "1frix3rnm9ffr93alqzw4cavxbfpf524l8rfbmcpyhwd3n1km0yl"))))
(build-system gnu-build-system)
- (inputs
- `(("cairo" ,cairo)
- ("fontconfig" ,fontconfig)
- ("gettext" ,gnu-gettext)
- ("gsl" ,gsl)
- ("libxml2" ,libxml2)
- ("pango" ,pango)
- ("readline" ,readline)
- ("gtk" ,gtk+-2)
- ("gtksourceview" ,gtksourceview-2)
- ("zlib" ,zlib)))
(native-inputs
- `(("glib" ,glib "bin") ;for glib-genmarshal
- ("perl" ,perl)
- ("texinfo" ,texinfo)
- ("pkg-config" ,pkg-config)))
- (home-page "http://www.gnu.org/software/pspp/")
- (synopsis "Statistical analysis")
+ `(("which" ,(@ (gnu packages base) which)))) ; for the tests
+ (inputs
+ `(("glpk" ,glpk)
+ ("gmp" ,gmp)))
+ (home-page "http://www.4ti2.de/")
+ (synopsis "Mathematical tool suite for problems on linear spaces")
(description
- "GNU PSPP is a statistical analysis program. It can perform
-descriptive statistics, T-tests, linear regression and non-parametric tests.
-It features both a graphical interface as well as command-line input. PSPP
-is designed to interoperate with Gnumeric, LibreOffice and OpenOffice. Data
-can be imported from spreadsheets, text files and database sources and it can
-be output in text, PostScript, PDF or HTML.")
- (license license:gpl3+)))
+ "4ti2 implements algorithms for solving algebraic, geometric and
+combinatorial problems on linear spaces. Among others, it solves systems
+of linear equations, computes extreme rays of polyhedral cones, solves
+integer programming problems and computes Markov bases for statistics.")
+ (license license:gpl2+)))
+
+(define-public cddlib
+ (package
+ (name "cddlib")
+ (version "0.94h")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "ftp://ftp.ifor.math.ethz.ch/pub/fukuda/cdd/cddlib-"
+ (string-delete #\. version) ".tar.gz"))
+ (sha256
+ (base32
+ "1dasasscwfg793q8fwzgwf64xwj7w62yfvszpr8x8g38jka08vgy"))))
+ (build-system gnu-build-system)
+ (inputs
+ `(("gmp" ,gmp)))
+ (home-page "https://www.inf.ethz.ch/personal/fukudak/cdd_home/index.html")
+ (synopsis "Library for convex hulls and extreme rays of polyhedra")
+ (description
+ "The C-library cddlib implements the Double Description Method of
+Motzkin et al. for generating all vertices (i.e. extreme points) and extreme
+rays of a general convex polyhedron given by a system of linear inequalities
+in arbitrary dimension. It can also be used for the converse operation of
+computing convex hulls.")
+ (license license:gpl2+)))
(define-public arpack-ng
(package
diff --git a/gnu/packages/mc.scm b/gnu/packages/mc.scm
index 6e3747c943..43dab8ff41 100644
--- a/gnu/packages/mc.scm
+++ b/gnu/packages/mc.scm
@@ -1,5 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014 Eric Bavier <bavier@member.fsf.org>
+;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -33,7 +34,7 @@
(define-public mc
(package
(name "mc")
- (version "4.8.11")
+ (version "4.8.16")
(source
(origin
(method url-fetch)
@@ -41,8 +42,7 @@
version ".tar.xz"))
(sha256
(base32
- "0flrw5pq2mg2d39bh6dllndhpcfppjza6g70p4ry2wcx9y2flxqq"))
- (patches (list (search-patch "mc-fix-ncurses-build.patch")))))
+ "083h5gwc0nny9b557way5dsmj71g2bzkiai4bn30y5nkjwqbxg5v"))))
(build-system gnu-build-system)
(native-inputs `(("pkg-config" ,pkg-config)
("perl" ,perl)))
@@ -63,4 +63,4 @@ copying and moving, Midnight Commander also supports viewing the contents of
RPM package files and other archives and managing files on other computers via
FTP or FISH. It also includes a powerful text editor for opening text
files.")
- (license gpl2)))
+ (license gpl3+)))
diff --git a/gnu/packages/miscfiles.scm b/gnu/packages/miscfiles.scm
deleted file mode 100644
index fd0fc7b8e2..0000000000
--- a/gnu/packages/miscfiles.scm
+++ /dev/null
@@ -1,47 +0,0 @@
-;;; GNU Guix --- Functional package management for GNU
-;;; Copyright 2014 John Darrington <jmd@gnu.org>
-;;;
-;;; This file is part of GNU Guix.
-;;;
-;;; GNU Guix is free software; you can redistribute it and/or modify it
-;;; under the terms of the GNU General Public License as published by
-;;; the Free Software Foundation; either version 3 of the License, or (at
-;;; your option) any later version.
-;;;
-;;; GNU Guix is distributed in the hope that it will be useful, but
-;;; WITHOUT ANY WARRANTY; without even the implied warranty of
-;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-;;; GNU General Public License for more details.
-;;;
-;;; You should have received a copy of the GNU General Public License
-;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
-
-(define-module (gnu packages miscfiles)
- #:use-module (guix licenses)
- #:use-module (guix packages)
- #:use-module (guix download)
- #:use-module (guix build-system gnu))
-
-(define-public miscfiles
- (package
- (name "miscfiles")
- (version "1.5")
- (source
- (origin
- (method url-fetch)
- (uri (string-append "mirror://gnu/" name "/" name "-"
- version ".tar.gz"))
- (sha256
- (base32
- "005588vfrwx8ghsdv9p7zczj9lbc9a3r4m5aphcaqv8gif4siaka"))))
- (build-system gnu-build-system)
- (home-page "https://www.gnu.org/software/miscfiles/")
- (synopsis
- "Data files for airport codes, zip codes, a dictionary, and more")
- (description
- "GNU Miscfiles is a collection of common data files. They include, for
-example, country abbreviations, names and capital cities; currency
-abbreviations and names; a Best Current Practices index; a map of the ASCII
-character set; a list of three-letter airport codes; and an English word
-list.")
- (license gpl2+)))
diff --git a/gnu/packages/mpd.scm b/gnu/packages/mpd.scm
index 55c09bc897..1af66e039c 100644
--- a/gnu/packages/mpd.scm
+++ b/gnu/packages/mpd.scm
@@ -72,7 +72,7 @@ interfacing MPD in the C, C++ & Objective C languages.")
(define-public mpd
(package
(name "mpd")
- (version "0.19.12")
+ (version "0.19.14")
(source (origin
(method url-fetch)
(uri
@@ -81,7 +81,7 @@ interfacing MPD in the C, C++ & Objective C languages.")
"/mpd-" version ".tar.xz"))
(sha256
(base32
- "0xg8w5vn6xd0yfw55qj6wnav7v14nmr00s3d4w5gixbjrv3ycvvv"))))
+ "1rwr1qb9an1qylddf35xwdasyfkxghd00c29saj04l1f2c2kilig"))))
(build-system gnu-build-system)
(inputs `(("ao" ,ao)
("alsa-lib" ,alsa-lib)
diff --git a/gnu/packages/music.scm b/gnu/packages/music.scm
index ffee9d6245..1fa142120e 100644
--- a/gnu/packages/music.scm
+++ b/gnu/packages/music.scm
@@ -5,6 +5,7 @@
;;; Copyright © 2016 Al McElrath <hello@yrns.org>
;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Leo Famulari <leo@famulari.name>
+;;; Copyright © 2016 Kei Yamashita <kei@openmailbox.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -78,6 +79,7 @@
#:use-module (gnu packages rdf)
#:use-module (gnu packages readline)
#:use-module (gnu packages rsync)
+ #:use-module (gnu packages sdl)
#:use-module (gnu packages tcl)
#:use-module (gnu packages texinfo)
#:use-module (gnu packages texlive)
@@ -312,7 +314,10 @@ interface. It is implemented as a frontend to @code{klick}.")
(add-before 'configure 'prepare-configuration
(lambda _
(substitute* "configure"
- (("SHELL=/bin/sh") "SHELL=sh"))
+ (("SHELL=/bin/sh") "SHELL=sh")
+ ;; When checking the fontforge version do not consider the
+ ;; version string that's part of the directory.
+ (("head -n") "tail -n"))
(setenv "out" "www")
(setenv "conf" "www")
#t))
@@ -1068,14 +1073,14 @@ computer's keyboard.")
(define-public qtractor
(package
(name "qtractor")
- (version "0.7.3")
+ (version "0.7.5")
(source (origin
(method url-fetch)
(uri (string-append "http://downloads.sourceforge.net/qtractor/"
"qtractor-" version ".tar.gz"))
(sha256
(base32
- "1vy4297myyqk0k58nzybgvgklckhngpdcnmp98k0rq98dirclbl7"))))
+ "0drqzp1rbqmqiwdzc9n3307y8rm882fha3awy5qlvir5ma2mwl80"))))
(build-system gnu-build-system)
(arguments `(#:tests? #f)) ; no "check" target
(inputs
@@ -1198,9 +1203,8 @@ MusicBrainz database.")
(build-system python-build-system)
(home-page "https://github.com/echonest/pyechonest")
(synopsis "Python interface to The Echo Nest APIs")
- (description "Pyechonest is an open source Python library for the Echo Nest
-API. With Pyechonest you have Python access to the entire set of API methods
-including:
+ (description "Pyechonest is a Python library for the Echo Nest API. With
+Pyechonest you have Python access to the entire set of API methods including:
@enumerate
@item artist - search for artists by name, description, or attribute, and get
@@ -1272,13 +1276,16 @@ websites such as Libre.fm.")
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'set-HOME
- (lambda _ (setenv "HOME" (string-append (getcwd) "/tmp")))))))
+ (lambda _ (setenv "HOME" (string-append (getcwd) "/tmp"))))
+ (replace 'check
+ (lambda _ (zero? (system* "nosetests" "-v")))))))
(native-inputs
`(("python2-beautifulsoup4" ,python2-beautifulsoup4)
("python2-flask" ,python2-flask)
("python2-setuptools" ,python2-setuptools)
("python2-mock" ,python2-mock)
("python2-mpd2" ,python2-mpd2)
+ ("python2-nose" ,python2-nose)
("python2-pathlib" ,python2-pathlib)
("python2-pyxdg" ,python2-pyxdg)
("python2-pyechonest" ,python2-pyechonest)
@@ -1301,3 +1308,33 @@ once and for all. It catalogs your collection, automatically improving its
metadata as it goes using the MusicBrainz database. Then it provides a variety
of tools for manipulating and accessing your music.")
(license license:expat)))
+
+(define-public milkytracker
+ (package
+ (name "milkytracker")
+ (version "0.90.86")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "http://milkytracker.org/files/"
+ name "-" version ".tar.bz2"))
+ (sha256
+ (base32
+ "1v9vp8vi24lkagfpr92c128whvakwgrm9pq2zf6ijpl5sh7014zb"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:make-flags '("CXXFLAGS=-lasound")))
+ (inputs
+ `(("alsa-lib" ,alsa-lib)
+ ("jack" ,jack-1)
+ ("sdl" ,sdl)
+ ("zlib" ,zlib)))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)))
+ (synopsis "Music tracker for working with .MOD/.XM module files")
+ (description "MilkyTracker is a music application for creating .MOD and .XM
+module files. It attempts to recreate the module replay and user experience of
+the popular DOS program Fasttracker II, with special playback modes available
+for improved Amiga ProTracker 2/3 compatibility.")
+ (home-page "http://milkytracker.org/")
+ ;; 'src/milkyplay' is under Modified BSD, the rest is under GPL3 or later.
+ (license (list license:bsd-3 license:gpl3+))))
diff --git a/gnu/packages/networking.scm b/gnu/packages/networking.scm
index ac7e4e70e6..a4f431a0b1 100644
--- a/gnu/packages/networking.scm
+++ b/gnu/packages/networking.scm
@@ -4,6 +4,7 @@
;;; Copyright © 2015 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2015 Stefan Reichör <stefan@xsteve.at>
;;; Copyright © 2016 Raimon Grau <raimonster@gmail.com>
+;;; Copyright © 2016 Tobias Geerinckx-Rice <tobias.geerinckx.rice@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -26,7 +27,10 @@
#:use-module (guix download)
#:use-module (guix build-system gnu)
#:use-module (gnu packages tls)
- #:use-module (gnu packages ncurses))
+ #:use-module (gnu packages ncurses)
+ #:use-module (gnu packages check)
+ #:use-module (gnu packages pkg-config)
+ #:use-module (gnu packages compression))
(define-public miredo
(package
@@ -210,3 +214,41 @@ bandwidth usage in real time. It visualizes the in- and outgoing traffic using
two graphs and provides additional info like total amount of transfered data
and min/max network usage.")
(license license:gpl2+)))
+
+(define-public iodine
+ (package
+ (name "iodine")
+ (version "0.7.0")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "http://code.kryo.se/" name "/"
+ name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "0gh17kcxxi37k65zm4gqsvbk3aw7yphcs3c02pn1c4s2y6n40axd"))))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (add-before 'check 'delete-failing-tests
+ ;; Avoid https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=802105
+ (lambda _
+ (substitute* "tests/common.c"
+ (("tcase_add_test\\(tc, \
+test_parse_format_ipv(4(|_listen_all|_mapped_ipv6)|6)\\);")
+ "")))))
+ #:make-flags (list "CC=gcc"
+ (string-append "prefix=" (assoc-ref %outputs "out")))
+ #:test-target "test"))
+ (inputs `(("zlib" ,zlib)))
+ (native-inputs `(("check" ,check)
+ ("pkg-config" ,pkg-config)))
+ (home-page "http://code.kryo.se/iodine/")
+ (synopsis "Tunnel IPv4 data through a DNS server")
+ (description "Iodine tunnels IPv4 data through a DNS server. This
+can be useful in different situations where internet access is firewalled, but
+DNS queries are allowed. The bandwidth is asymmetrical, with limited upstream
+and up to 1 Mbit/s downstream.")
+ ;; src/md5.[ch] is released under the zlib license
+ (license (list license:isc license:zlib))))
diff --git a/gnu/packages/openstack.scm b/gnu/packages/openstack.scm
index 0fa488f842..947abf31a4 100644
--- a/gnu/packages/openstack.scm
+++ b/gnu/packages/openstack.scm
@@ -20,7 +20,6 @@
(define-module (gnu packages openstack)
#:use-module (gnu packages python)
#:use-module (gnu packages tls)
- #:use-module (gnu packages version-control)
#:use-module (guix build-system python)
#:use-module (guix download)
#:use-module ((guix licenses)
@@ -235,48 +234,6 @@ tested on Python version 3.2, 2.7 and 2.6.")
(define-public python2-os-testr
(package-with-python2 python-os-testr))
-(define-public python-pbr
- (package
- (name "python-pbr")
- (version "1.8.1")
- (source
- (origin
- (method url-fetch)
- (uri (string-append
- "https://pypi.python.org/packages/source/p/pbr/pbr-"
- version
- ".tar.gz"))
- (sha256
- (base32
- "0jcny36cf3s8ar5r4a575npz080hndnrfs4np1fqhv0ym4k7c4p2"))))
- (build-system python-build-system)
- (arguments
- `(#:tests? #f)) ;; Most tests seem to use the Internet.
- (propagated-inputs
- `(("python-testrepository" ,python-testrepository)
- ("git" ,git))) ;; pbr actually uses the "git" binary.
- (inputs
- `(("python-fixtures" ,python-fixtures)
- ("python-mimeparse" ,python-mimeparse)
- ("python-mock" ,python-mock)
- ("python-setuptools" ,python-setuptools)
- ("python-six" ,python-six)
- ("python-sphinx" ,python-sphinx)
- ("python-testrepository" ,python-testrepository)
- ("python-testresources" ,python-testresources)
- ("python-testscenarios" ,python-testscenarios)
- ("python-testtools" ,python-testtools)
- ("python-virtualenv" ,python-virtualenv)))
- (home-page "https://launchpad.net/pbr")
- (synopsis "Change the default behavior of Python’s setuptools")
- (description
- "Python Build Reasonableness (PBR) is a library that injects some useful
-and sensible default behaviors into your setuptools run.")
- (license asl2.0)))
-
-(define-public python2-pbr
- (package-with-python2 python-pbr))
-
(define-public python-requests-mock
(package
(name "python-requests-mock")
diff --git a/gnu/packages/package-management.scm b/gnu/packages/package-management.scm
index 7a7dec3363..38c9bdb7d1 100644
--- a/gnu/packages/package-management.scm
+++ b/gnu/packages/package-management.scm
@@ -60,17 +60,17 @@
arch "-linux"
"/20131110/guile-2.0.9.tar.xz")))
-(define-public guix-0.9.0
+(define-public guix-0.10.0
(package
(name "guix")
- (version "0.9.0")
+ (version "0.10.0")
(source (origin
(method url-fetch)
(uri (string-append "ftp://alpha.gnu.org/gnu/guix/guix-"
version ".tar.gz"))
(sha256
(base32
- "0h573z2br0bf43sxyzia9xlm03n3y43zg1snds3c2piq2m6kabrn"))))
+ "0d4afwy7bpqi4k4bzvwc4ga4shwssis1nrvdw53qjyg9bw1a8lbn"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags (list
@@ -140,9 +140,16 @@
(path (string-append
json "/share/guile/site/2.0:"
gnutls "/share/guile/site/2.0")))
+
+ ;; Ignore user settings so that a bogus
+ ;; GUILE_LOAD_COMPILED_PATH does not prevent use of
+ ;; 'guix', notably when it contains entries pointing to
+ ;; incompatible .go files as reported at
+ ;; <https://lists.gnu.org/archive/html/guix-devel/2016-03/msg01261.html>.
(wrap-program (string-append out "/bin/guix")
- `("GUILE_LOAD_PATH" ":" prefix (,path))
- `("GUILE_LOAD_COMPILED_PATH" ":" prefix (,path)))
+ `("GUILE_LOAD_PATH" ":" = (,path))
+ `("GUILE_LOAD_COMPILED_PATH" ":" = (,path)))
+
#t))))))
(native-inputs `(("pkg-config" ,pkg-config)
("emacs" ,emacs-no-x))) ;for guix.el
@@ -193,11 +200,11 @@ the Nix package manager.")
(define guix-devel
;; Development version of Guix.
;;
- ;; Note: use a short commit id; when using the long one, the limit on socket
- ;; file names is exceeded while running the tests.
- (let ((commit "71e2065a38cf2641b7eb8c557b0f043f5a42a649"))
- (package (inherit guix-0.9.0)
- (version (string-append "0.9.0." (string-take commit 7)))
+ ;; Note: use a very short commit id; with a longer one, the limit on
+ ;; hash-bang lines would be exceeded while running the tests.
+ (let ((commit "761139354798303c605964b896c250a01486b00a"))
+ (package (inherit guix-0.10.0)
+ (version (string-append "0.10.0-0." (string-take commit 4)))
(source (origin
(method git-fetch)
(uri (git-reference
@@ -205,10 +212,10 @@ the Nix package manager.")
(commit commit)))
(sha256
(base32
- "0wrrywfdc27yxjns55qdz5si49c8zcb9q5557g2kx48dbm7p0dzw"))
+ "1wvy9kms3v6k7cybw6489mqk161lv8d03qgmmxbmdgiwjmjxbzbn"))
(file-name (string-append "guix-" version "-checkout"))))
(arguments
- (substitute-keyword-arguments (package-arguments guix-0.9.0)
+ (substitute-keyword-arguments (package-arguments guix-0.10.0)
((#:configure-flags flags)
;; Set 'DOT_USER_PROGRAM' to the empty string so we don't keep a
;; reference to Graphviz, whose closure is pretty big (too big for
@@ -232,7 +239,7 @@ the Nix package manager.")
("texinfo" ,texinfo)
("graphviz" ,graphviz)
("help2man" ,help2man)
- ,@(package-native-inputs guix-0.9.0))))))
+ ,@(package-native-inputs guix-0.10.0))))))
(define-public guix guix-devel)
@@ -389,13 +396,13 @@ transactions from C or Python.")
(define-public diffoscope
(package
(name "diffoscope")
- (version "49")
+ (version "51")
(source (origin
(method url-fetch)
(uri (pypi-uri name version))
(sha256
(base32
- "1mf6b7j82ckn90ggz6bp6c2jydz87xj8r8jmfl4hg7jcmf7dxmim"))))
+ "18rn6rrwh586228vnaf1nq0wayh19zbvfc0qmnbys6ln2pv2v007"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
diff --git a/gnu/packages/patches/libextractor-ffmpeg-3.patch b/gnu/packages/patches/libextractor-ffmpeg-3.patch
new file mode 100644
index 0000000000..d0f83f624c
--- /dev/null
+++ b/gnu/packages/patches/libextractor-ffmpeg-3.patch
@@ -0,0 +1,360 @@
+Fix build with ffmpeg-3, based on upstream revisions r35548 and r35549 by LRN
+and r36975 by Christian Grothoff, and backported to libextractor-1.3 by
+Mark H Weaver <mhw@netris.org>
+
+--- libextractor-1.3/src/plugins/thumbnailffmpeg_extractor.c.orig 2013-12-21 11:04:41.000000000 -0500
++++ libextractor-1.3/src/plugins/thumbnailffmpeg_extractor.c 2016-04-04 23:38:46.429041081 -0400
+@@ -59,6 +59,12 @@
+ #include <ffmpeg/swscale.h>
+ #endif
+
++#ifdef PIX_FMT_RGB24
++#define PIX_OUTPUT_FORMAT PIX_FMT_RGB24
++#else
++#define PIX_OUTPUT_FORMAT AV_PIX_FMT_RGB24
++#endif
++
+ /**
+ * Set to 1 to enable debug output.
+ */
+@@ -153,7 +159,7 @@
+ static size_t
+ create_thumbnail (int src_width, int src_height,
+ int src_stride[],
+- enum PixelFormat src_pixfmt,
++ enum AVPixelFormat src_pixfmt,
+ const uint8_t * const src_data[],
+ int dst_width, int dst_height,
+ uint8_t **output_data,
+@@ -189,7 +195,8 @@
+ if (NULL ==
+ (scaler_ctx =
+ sws_getContext (src_width, src_height, src_pixfmt,
+- dst_width, dst_height, PIX_FMT_RGB24,
++ dst_width, dst_height,
++ PIX_OUTPUT_FORMAT,
+ SWS_BILINEAR, NULL, NULL, NULL)))
+ {
+ #if DEBUG
+@@ -199,7 +206,12 @@
+ return 0;
+ }
+
+- if (NULL == (dst_frame = avcodec_alloc_frame ()))
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ dst_frame = av_frame_alloc ();
++#else
++ dst_frame = avcodec_alloc_frame();
++#endif
++ if (NULL == dst_frame)
+ {
+ #if DEBUG
+ fprintf (stderr,
+@@ -209,18 +221,24 @@
+ return 0;
+ }
+ if (NULL == (dst_buffer =
+- av_malloc (avpicture_get_size (PIX_FMT_RGB24, dst_width, dst_height))))
++ av_malloc (avpicture_get_size (PIX_OUTPUT_FORMAT,
++ dst_width, dst_height))))
+ {
+ #if DEBUG
+ fprintf (stderr,
+ "Failed to allocate the destination image buffer\n");
+ #endif
+- av_free (dst_frame);
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (&dst_frame);
++#else
++ avcodec_free_frame (&dst_frame);
++#endif
+ sws_freeContext (scaler_ctx);
+ return 0;
+ }
+ avpicture_fill ((AVPicture *) dst_frame, dst_buffer,
+- PIX_FMT_RGB24, dst_width, dst_height);
++ PIX_OUTPUT_FORMAT,
++ dst_width, dst_height);
+ sws_scale (scaler_ctx,
+ src_data,
+ src_stride,
+@@ -236,7 +254,11 @@
+ "Failed to allocate the encoder output buffer\n");
+ #endif
+ av_free (dst_buffer);
+- av_free (dst_frame);
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (&dst_frame);
++#else
++ avcodec_free_frame (&dst_frame);
++#endif
+ sws_freeContext (scaler_ctx);
+ return 0;
+ }
+@@ -249,13 +271,17 @@
+ #endif
+ av_free (encoder_output_buffer);
+ av_free (dst_buffer);
+- av_free (dst_frame);
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (&dst_frame);
++#else
++ avcodec_free_frame (&dst_frame);
++#endif
+ sws_freeContext (scaler_ctx);
+ return 0;
+ }
+ encoder_codec_ctx->width = dst_width;
+ encoder_codec_ctx->height = dst_height;
+- encoder_codec_ctx->pix_fmt = PIX_FMT_RGB24;
++ encoder_codec_ctx->pix_fmt = PIX_OUTPUT_FORMAT;
+ opts = NULL;
+ if (avcodec_open2 (encoder_codec_ctx, encoder_codec, &opts) < 0)
+ {
+@@ -263,10 +289,14 @@
+ fprintf (stderr,
+ "Failed to open the encoder\n");
+ #endif
+- av_free (encoder_codec_ctx);
++ avcodec_free_context (&encoder_codec_ctx);
+ av_free (encoder_output_buffer);
+ av_free (dst_buffer);
+- av_free (dst_frame);
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (&dst_frame);
++#else
++ avcodec_free_frame (&dst_frame);
++#endif
+ sws_freeContext (scaler_ctx);
+ return 0;
+ }
+@@ -295,9 +325,13 @@
+ cleanup:
+ av_dict_free (&opts);
+ avcodec_close (encoder_codec_ctx);
+- av_free (encoder_codec_ctx);
++ avcodec_free_context (&encoder_codec_ctx);
+ av_free (dst_buffer);
+- av_free (dst_frame);
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (&dst_frame);
++#else
++ avcodec_free_frame (&dst_frame);
++#endif
+ sws_freeContext (scaler_ctx);
+ *output_data = encoder_output_buffer;
+
+@@ -406,18 +440,23 @@
+ fprintf (stderr,
+ "Failed to open image codec\n");
+ #endif
+- av_free (codec_ctx);
++ avcodec_free_context (&codec_ctx);
+ return;
+ }
+ av_dict_free (&opts);
+- if (NULL == (frame = avcodec_alloc_frame ()))
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ frame = av_frame_alloc ();
++#else
++ frame = avcodec_alloc_frame();
++#endif
++ if (NULL == frame)
+ {
+ #if DEBUG
+ fprintf (stderr,
+ "Failed to allocate frame\n");
+ #endif
+ avcodec_close (codec_ctx);
+- av_free (codec_ctx);
++ avcodec_free_context (&codec_ctx);
+ return;
+ }
+
+@@ -441,9 +480,13 @@
+ fprintf (stderr,
+ "Failed to decode a complete frame\n");
+ #endif
+- av_free (frame);
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (&frame);
++#else
++ avcodec_free_frame (&frame);
++#endif
+ avcodec_close (codec_ctx);
+- av_free (codec_ctx);
++ avcodec_free_context (&codec_ctx);
+ return;
+ }
+ calculate_thumbnail_dimensions (codec_ctx->width, codec_ctx->height,
+@@ -467,9 +510,13 @@
+ err);
+ av_free (encoded_thumbnail);
+ }
+- av_free (frame);
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (&frame);
++#else
++ avcodec_free_frame (&frame);
++#endif
+ avcodec_close (codec_ctx);
+- av_free (codec_ctx);
++ avcodec_free_context (&codec_ctx);
+ }
+
+
+@@ -563,7 +610,12 @@
+ return;
+ }
+
+- if (NULL == (frame = avcodec_alloc_frame ()))
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ frame = av_frame_alloc ();
++#else
++ frame = avcodec_alloc_frame();
++#endif
++ if (NULL == frame)
+ {
+ #if DEBUG
+ fprintf (stderr,
+@@ -616,7 +668,11 @@
+ fprintf (stderr,
+ "Failed to decode a complete frame\n");
+ #endif
+- av_free (frame);
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (&frame);
++#else
++ avcodec_free_frame (&frame);
++#endif
+ avcodec_close (codec_ctx);
+ avformat_close_input (&format_ctx);
+ av_free (io_ctx);
+@@ -643,7 +699,11 @@
+ err);
+ av_free (encoded_thumbnail);
+ }
+- av_free (frame);
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (&frame);
++#else
++ avcodec_free_frame (&frame);
++#endif
+ avcodec_close (codec_ctx);
+ avformat_close_input (&format_ctx);
+ av_free (io_ctx);
+--- libextractor-1.3/src/plugins/previewopus_extractor.c.orig 2013-12-22 17:44:18.000000000 -0500
++++ libextractor-1.3/src/plugins/previewopus_extractor.c 2016-04-04 23:39:41.377720710 -0400
+@@ -296,8 +296,13 @@
+ /** Initialize one audio frame for reading from the input file */
+ static int init_input_frame(AVFrame **frame)
+ {
+- if (!(*frame = avcodec_alloc_frame())) {
+- #if DEBUG
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ *frame = av_frame_alloc ();
++#else
++ *frame = avcodec_alloc_frame();
++#endif
++ if (NULL == *frame) {
++#if DEBUG
+ fprintf(stderr, "Could not allocate input frame\n");
+ #endif
+ return AVERROR(ENOMEM);
+@@ -655,7 +660,11 @@
+ av_freep(&converted_input_samples[0]);
+ free(converted_input_samples);
+ }
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (&input_frame);
++#else
+ avcodec_free_frame(&input_frame);
++#endif
+
+ return ret;
+ }
+@@ -671,10 +680,15 @@
+ int error;
+
+ /** Create a new frame to store the audio samples. */
+- if (!(*frame = avcodec_alloc_frame())) {
+- #if DEBUG
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ *frame = av_frame_alloc ();
++#else
++ *frame = avcodec_alloc_frame();
++#endif
++ if (NULL == *frame) {
++#if DEBUG
+ fprintf(stderr, "Could not allocate output frame\n");
+- #endif
++#endif
+ return AVERROR_EXIT;
+ }
+
+@@ -699,10 +713,14 @@
+ * sure that the audio frame can hold as many samples as specified.
+ */
+ if ((error = av_frame_get_buffer(*frame, 0)) < 0) {
+- #if DEBUG
++#if DEBUG
+ fprintf(stderr, "Could allocate output frame samples (error '%s')\n", get_error_text(error));
+- #endif
++#endif
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (frame);
++#else
+ avcodec_free_frame(frame);
++#endif
+ return error;
+ }
+
+@@ -780,20 +798,32 @@
+ * The samples are stored in the frame temporarily.
+ */
+ if (av_audio_fifo_read(fifo, (void **)output_frame->data, frame_size) < frame_size) {
+- #if DEBUG
++#if DEBUG
+ fprintf(stderr, "Could not read data from FIFO\n");
+- #endif
++#endif
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (&output_frame);
++#else
+ avcodec_free_frame(&output_frame);
++#endif
+ return AVERROR_EXIT;
+ }
+
+ /** Encode one frame worth of audio samples. */
+ if (encode_audio_frame(output_frame, output_format_context,
+ output_codec_context, &data_written)) {
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (&output_frame);
++#else
+ avcodec_free_frame(&output_frame);
++#endif
+ return AVERROR_EXIT;
+ }
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ av_frame_free (&output_frame);
++#else
+ avcodec_free_frame(&output_frame);
++#endif
+ return 0;
+ }
+ /** Write the trailer of the output file container. */
+@@ -907,7 +937,12 @@
+ return;
+ }
+
+- if (NULL == (frame = avcodec_alloc_frame ()))
++#if LIBAVCODEC_VERSION_INT >= AV_VERSION_INT(55,28,1)
++ frame = av_frame_alloc ();
++#else
++ frame = avcodec_alloc_frame();
++#endif
++ if (NULL == frame)
+ {
+ #if DEBUG
+ fprintf (stderr,
diff --git a/gnu/packages/patches/mc-fix-ncurses-build.patch b/gnu/packages/patches/mc-fix-ncurses-build.patch
deleted file mode 100644
index c583c92e10..0000000000
--- a/gnu/packages/patches/mc-fix-ncurses-build.patch
+++ /dev/null
@@ -1,37 +0,0 @@
-Patch cherry-picked from resolution of
-http://www.midnight-commander.org/ticket/3114
-
---- a/lib/tty/key.c (revision 0ed4a91d7df4e50512defd2e0734ecab7c9da07f)
-+++ b/lib/tty/key.c (revision d870aedad1907773f8586fe818a89e6b5178b849)
-@@ -1947,4 +1947,5 @@
- {
- int c;
-+ int flag = 0; /* Return value from select */
- #ifdef HAVE_LIBGPM
- static struct Gpm_Event ev; /* Mouse event */
-@@ -1979,5 +1980,4 @@
- {
- int nfd;
-- static int flag = 0; /* Return value from select */
- fd_set select_set;
-
---- a/lib/tty/tty-ncurses.c (revision bb65b467900ea9eb1f7867c059fd26fac86c747c)
-+++ b/lib/tty/tty-ncurses.c (revision d870aedad1907773f8586fe818a89e6b5178b849)
-@@ -50,4 +50,5 @@
- #include "tty.h"
- #include "color-internal.h"
-+#include "key.h"
- #include "mouse.h"
- #include "win.h"
-@@ -531,4 +532,5 @@
- {
- int res;
-+ unsigned char str[UTF8_CHAR_LEN + 1];
-
- res = g_unichar_to_utf8 (c, (char *) str);
-@@ -541,5 +543,4 @@
- else
- {
-- unsigned char str[UTF8_CHAR_LEN + 1];
- const char *s;
-
diff --git a/gnu/packages/patches/openssl-c-rehash.patch b/gnu/packages/patches/openssl-c-rehash.patch
deleted file mode 100644
index f873a9af23..0000000000
--- a/gnu/packages/patches/openssl-c-rehash.patch
+++ /dev/null
@@ -1,17 +0,0 @@
-This patch removes the explicit reference to the 'perl' binary,
-such that OpenSSL does not retain a reference to Perl.
-
-The 'c_rehash' program is seldom used, but it is used nonetheless
-to create symbolic links to certificates, for instance in the 'nss-certs'
-package.
-
---- openssl-1.0.2d/tools/c_rehash 2015-09-09 18:36:07.313316482 +0200
-+++ openssl-1.0.2d/tools/c_rehash 2015-09-09 18:36:28.965458458 +0200
-@@ -1,4 +1,6 @@
--#!/usr/bin/perl
-+eval '(exit $?0)' && eval 'exec perl -wS "$0" ${1+"$@"}'
-+ & eval 'exec perl -wS "$0" $argv:q'
-+ if 0;
-
- # Perl c_rehash script, scan all files in a directory
- # and add symbolic links to their hash values.
diff --git a/gnu/packages/patches/webkitgtk-2.4-sql-init-string.patch b/gnu/packages/patches/webkitgtk-2.4-sql-init-string.patch
deleted file mode 100644
index 671b5fb910..0000000000
--- a/gnu/packages/patches/webkitgtk-2.4-sql-init-string.patch
+++ /dev/null
@@ -1,17 +0,0 @@
-Copied from Fedora.
-
-https://bugzilla.redhat.com/show_bug.cgi?id=1189303
-http://pkgs.fedoraproject.org/cgit/webkitgtk.git/commit/?id=e689e45d0cc2c50484e69d20371ba607af7326f3
-
-diff -up webkitgtk-2.4.9/Source/WebCore/platform/sql/SQLiteStatement.cpp.sql_initialize_string webkitgtk-2.4.9/Source/WebCore/platform/sql/SQLiteStatement.cpp
---- webkitgtk-2.4.9/Source/WebCore/platform/sql/SQLiteStatement.cpp.sql_initialize_string 2015-09-14 09:25:43.004200172 +0200
-+++ webkitgtk-2.4.9/Source/WebCore/platform/sql/SQLiteStatement.cpp 2015-09-14 09:25:57.852082368 +0200
-@@ -71,7 +71,7 @@ int SQLiteStatement::prepare()
- // this lets SQLite avoid an extra string copy.
- size_t lengthIncludingNullCharacter = query.length() + 1;
-
-- const char* tail;
-+ const char* tail = nullptr;
- int error = sqlite3_prepare_v2(m_database.sqlite3Handle(), query.data(), lengthIncludingNullCharacter, &m_statement, &tail);
-
- if (error != SQLITE_OK)
diff --git a/gnu/packages/patches/wicd-template-instantiation.patch b/gnu/packages/patches/wicd-template-instantiation.patch
deleted file mode 100644
index 16d8fa6e1d..0000000000
--- a/gnu/packages/patches/wicd-template-instantiation.patch
+++ /dev/null
@@ -1,29 +0,0 @@
-Wicd 1.7.3 fails to instantiate template lines that have several
-variable references. For instance, the line:
-
- wep_key$_KEY_INDEX=$_KEY
-
-which is found in in the 'wep-hex' template, expands to these two
-lines:
-
- wep_key0=$_KEY
- wep_key0=123456789ab
-
-This patch fixes that by only emitting the fully substituted line.
-
-Patch by Ludovic Courtès <ludo@gnu.org>.
-
---- a/wicd/misc.py 2012-11-17 00:07:08 +0000
-+++ b/wicd/misc.py 2015-05-09 11:22:37 +0000
-@@ -321,11 +321,11 @@ def ParseEncryption(network):
- rep_val = '0'
- if rep_val:
- line = line.replace("$_%s" % cur_val, str(rep_val))
-- config_file = ''.join([config_file, line])
- else:
- print "Ignoring template line: '%s'" % line
- else:
- print "Weird parsing error occurred"
-+ config_file = ''.join([config_file, line])
- else: # Just a regular entry.
- config_file = ''.join([config_file, line])
diff --git a/gnu/packages/patches/wicd-wpa2-ttls.patch b/gnu/packages/patches/wicd-wpa2-ttls.patch
new file mode 100644
index 0000000000..9d80ee7ed2
--- /dev/null
+++ b/gnu/packages/patches/wicd-wpa2-ttls.patch
@@ -0,0 +1,38 @@
+Add a template for WPA2-TTLS, which is notably used by Eduroam.
+
+--- a/encryption/templates/active
++++ b/encryption/templates/active
+@@ -4,6 +4,7 @@ wpa-psk
+ wpa-psk-hex
+ wpa2-leap
+ wpa2-peap
++wpa2-ttls
+ wep-hex
+ wep-passphrase
+ wep-shared
+diff --git a/encryption/templates/wpa2-ttls b/encryption/templates/wpa2-ttls
+new file mode 100644
+index 0000000..4f66a1e
+--- /dev/null
++++ b/encryption/templates/wpa2-ttls
+@@ -0,0 +1,20 @@
++name = WPA2-TTLS (used notably by Eduroam)
++author = various contributors
++version = 1
++require identity *Identity anonymous_identity *Anonymous_identity password *Password ca_cert *Path_to_CA_Cert
++protected password *Password
++-----
++ctrl_interface=/var/run/wpa_supplicant
++network={
++ ssid="$_ESSID"
++ scan_ssid=$_SCAN
++ proto=WPA2
++ key_mgmt=WPA-EAP
++ group=CCMP TKIP
++ eap=TTLS
++ identity="$_IDENTITY"
++ password="$_PASSWORD"
++ anonymous_identity="$_ANONYMOUS_IDENTITY"
++ ca_cert="$_CA_CERT"
++ phase2="auth=PAP"
++}
diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm
index fb42735495..9bbcc8ffa4 100644
--- a/gnu/packages/perl.scm
+++ b/gnu/packages/perl.scm
@@ -38,7 +38,6 @@
(define-public perl
;; Yeah, Perl... It is required early in the bootstrap process by Linux.
(package
- (replacement perl-fixed)
(name "perl")
(version "5.22.1")
(source (origin
@@ -54,7 +53,8 @@
"perl-source-date-epoch.patch"
"perl-deterministic-ordering.patch"
"perl-no-build-time.patch"
- "perl-CVE-2015-8607.patch")))))
+ "perl-CVE-2015-8607.patch"
+ "perl-CVE-2016-2381.patch")))))
(build-system gnu-build-system)
(arguments
'(#:tests? #f
@@ -116,28 +116,6 @@
(home-page "http://www.perl.org/")
(license gpl1+))) ; or "Artistic"
-(define perl-fixed
- (package
- (inherit perl)
- (replacement #f)
- (source
- (let ((name "perl") (version "5.22.1"))
- (origin
- (method url-fetch)
- (uri (string-append "http://www.cpan.org/src/5.0/perl-"
- version ".tar.gz"))
- (sha256
- (base32
- "09wg24w5syyafyv87l6z8pxwz4bjgcdj996bx5844k6m9445sirb"))
- (patches (map search-patch
- '("perl-no-sys-dirs.patch"
- "perl-autosplit-default-time.patch"
- "perl-source-date-epoch.patch"
- "perl-deterministic-ordering.patch"
- "perl-no-build-time.patch"
- "perl-CVE-2015-8607.patch"
- "perl-CVE-2016-2381.patch"))))))))
-
(define-public perl-algorithm-c3
(package
(name "perl-algorithm-c3")
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index c2685f6055..1db749bff1 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -16,7 +16,7 @@
;;; Copyright © 2015, 2016 Erik Edrosa <erik.edrosa@gmail.com>
;;; Copyright © 2015, 2016 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2015 Kyle Meyer <kyle@kyleam.com>
-;;; Copyright © 2015 Chris Marusich <cmmarusich@gmail.com>
+;;; Copyright © 2015, 2016 Chris Marusich <cmmarusich@gmail.com>
;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org>
;;;
;;; This file is part of GNU Guix.
@@ -69,6 +69,7 @@
#:use-module (gnu packages texlive)
#:use-module (gnu packages texinfo)
#:use-module (gnu packages tls)
+ #:use-module (gnu packages version-control)
#:use-module (gnu packages web)
#:use-module (gnu packages base)
#:use-module (gnu packages xml)
@@ -701,7 +702,7 @@ concepts.")
(define-public python-lockfile
(package
(name "python-lockfile")
- (version "0.9.1")
+ (version "0.12.2")
(source
(origin
(method url-fetch)
@@ -709,18 +710,25 @@ concepts.")
"lockfile-" version ".tar.gz"))
(sha256
(base32
- "0iwif7i84gwpvrnpv4brshdk8j6l77smvknm8k3bg77mj6f5ini3"))))
+ "16gpx5hm73ah5n1079ng0vy381hl802v606npkx4x8nb0gg05vba"))))
(build-system python-build-system)
(arguments '(#:test-target "check"))
+ (native-inputs
+ `(("python-pbr" ,python-pbr)))
(home-page "http://code.google.com/p/pylockfile/")
(synopsis "Platform-independent file locking module")
(description
"The lockfile package exports a LockFile class which provides a simple
API for locking files.")
- (license license:expat)))
+ (license license:expat)
+ (properties `((python2-variant . ,(delay python2-lockfile))))))
(define-public python2-lockfile
- (package-with-python2 python-lockfile))
+ (let ((base (package-with-python2 (strip-python2-variant python-lockfile))))
+ (package
+ (inherit base)
+ (native-inputs `(("python2-setuptools" ,python2-setuptools)
+ ,@(package-native-inputs base))))))
(define-public python-mock
(package
@@ -967,20 +975,14 @@ datetime module, available in Python 2.3+.")
(define-public python-pandas
(package
(name "python-pandas")
- (version "0.16.2")
+ (version "0.18.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pandas" version))
(sha256
- (base32 "10agmrkps8bi5948vwpipfxds5kj1d076m9i0nhaxwqiw7gm6670"))))
+ (base32 "050qw0ap5bhyv5flp78x3lcq1dlminl3xaj6kbrm0jqmx0672xf9"))))
(build-system python-build-system)
- (arguments
- `(;; Three tests fail:
- ;; - test_read_google
- ;; - test_read_yahoo
- ;; - test_month_range_union_tz_dateutil
- #:tests? #f))
(propagated-inputs
`(("python-numpy" ,python-numpy)
("python-pytz" ,python-pytz)
@@ -1519,7 +1521,7 @@ code introspection, and logging.")
(define-public python-pytest
(package
(name "python-pytest")
- (version "2.6.1")
+ (version "2.7.3")
(source
(origin
(method url-fetch)
@@ -1528,7 +1530,7 @@ code introspection, and logging.")
version ".tar.gz"))
(sha256
(base32
- "0g2w4p0n42wvz8rq4k6gnzpkakgz3g8sfanxk8jrsra9675snkcr"))
+ "1z4yi986f9n0p8qmzmn21m21m8j1x78hk3505f89baqm6pdw7afm"))
(modules '((guix build utils)))
(snippet
;; One of the tests involves the /usr directory, so it fails.
@@ -1862,6 +1864,48 @@ and sensible default behaviors into your setuptools run.")
(define-public python2-pbr-0.11
(package-with-python2 python-pbr-0.11))
+(define-public python-pbr
+ (package
+ (name "python-pbr")
+ (version "1.8.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append
+ "https://pypi.python.org/packages/source/p/pbr/pbr-"
+ version
+ ".tar.gz"))
+ (sha256
+ (base32
+ "0jcny36cf3s8ar5r4a575npz080hndnrfs4np1fqhv0ym4k7c4p2"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:tests? #f)) ;; Most tests seem to use the Internet.
+ (propagated-inputs
+ `(("python-testrepository" ,python-testrepository)
+ ("git" ,git))) ;; pbr actually uses the "git" binary.
+ (inputs
+ `(("python-fixtures" ,python-fixtures)
+ ("python-mimeparse" ,python-mimeparse)
+ ("python-mock" ,python-mock)
+ ("python-setuptools" ,python-setuptools)
+ ("python-six" ,python-six)
+ ("python-sphinx" ,python-sphinx)
+ ("python-testrepository" ,python-testrepository)
+ ("python-testresources" ,python-testresources)
+ ("python-testscenarios" ,python-testscenarios)
+ ("python-testtools" ,python-testtools)
+ ("python-virtualenv" ,python-virtualenv)))
+ (home-page "https://launchpad.net/pbr")
+ (synopsis "Change the default behavior of Python’s setuptools")
+ (description
+ "Python Build Reasonableness (PBR) is a library that injects some useful
+and sensible default behaviors into your setuptools run.")
+ (license asl2.0)))
+
+(define-public python2-pbr
+ (package-with-python2 python-pbr))
+
(define-public python-fixtures
(package
(name "python-fixtures")
@@ -5376,7 +5420,7 @@ should be stored on various operating systems.")
(define-public python-llfuse
(package
(name "python-llfuse")
- (version "0.41")
+ (version "1.0")
(source (origin
(method url-fetch)
(uri (string-append
@@ -5384,7 +5428,7 @@ should be stored on various operating systems.")
"llfuse-" version ".tar.bz2"))
(sha256
(base32
- "0yzy8ixpmxk00kdq6lx5vvwbs0n6s59qnja5q0js2ahbqyxiz2hb"))))
+ "1li7q04ljrvwharw4fblcbfhvk6s0l3lnv8yqb4c22lcgbkiqlps"))))
(build-system python-build-system)
(inputs
`(("fuse" ,fuse)
@@ -5396,34 +5440,54 @@ should be stored on various operating systems.")
(description
"Python-LLFUSE is a set of Python bindings for the low level FUSE API.")
(home-page "https://bitbucket.org/nikratio/python-llfuse/")
- ;; Python-LLFUSE includes underscore.js, which is MIT (expat) licensed.
- ;; The rest of the package is licensed under LGPL2.0 or later.
- (license (list license:expat lgpl2.0+))))
+ (license lgpl2.0+)
+ (properties `((python2-variant . ,(delay python2-llfuse))))))
(define-public python2-llfuse
- (package-with-python2 python-llfuse))
+ (package (inherit (package-with-python2
+ (strip-python2-variant python-llfuse)))
+ (propagated-inputs `(("python2-contextlib2" ,python2-contextlib2)))))
+
+;; For attic-0.16
+(define-public python-llfuse-0.41
+ (package (inherit python-llfuse)
+ (version "0.41.1")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append
+ "https://bitbucket.org/nikratio/python-llfuse/downloads/"
+ "llfuse-" version ".tar.bz2"))
+ (sha256
+ (base32
+ "1imlqw9b73086y97izr036f58pgc5akv4ihc2rrf8j5h75jbrlaa"))))
+ ;; Python-LLFUSE < 0.42 includes underscore.js, which is MIT (expat)
+ ;; licensed. The rest of the package is licensed under LGPL2.0 or later.
+ (license (list license:expat lgpl2.0+))))
(define-public python-msgpack
(package
(name "python-msgpack")
- (version "0.4.6")
+ (version "0.4.7")
(source (origin
(method url-fetch)
- (uri (string-append
- "https://pypi.python.org/packages/source/m/"
- "msgpack-python/msgpack-python-" version ".tar.gz"))
+ (uri (pypi-uri "msgpack-python" version))
(sha256
(base32
- "1527c76b6fn4zzkgfq5xvhh7x9a9686g7fjiz717rw5vklf5ik5z"))))
+ "0syd7bs83qs9qmxw540jbgsildbqk4yb57fmrlns1021llli402y"))))
(build-system python-build-system)
- (native-inputs
- `(("python-setuptools" ,python-setuptools)))
(synopsis "MessagePack (de)serializer")
(description "MessagePack is a fast, compact binary serialization format,
suitable for similar data to JSON. This package provides CPython bindings for
reading and writing MessagePack data.")
(home-page "https://pypi.python.org/pypi/msgpack-python/")
- (license asl2.0)))
+ (license asl2.0)
+ (properties `((python2-variant . ,(delay python2-msgpack))))))
+
+(define-public python2-msgpack
+ (package (inherit (package-with-python2
+ (strip-python2-variant python-msgpack)))
+ (native-inputs
+ `(("python2-setuptools" ,python2-setuptools)))))
(define-public python2-msgpack
(package-with-python2 python-msgpack))
@@ -5760,7 +5824,7 @@ responses, rather than doing any computation.")
(define-public python-cryptography-vectors
(package
(name "python-cryptography-vectors")
- (version "1.2.3")
+ (version "1.3.1")
(source
(origin
(method url-fetch)
@@ -5769,7 +5833,7 @@ responses, rather than doing any computation.")
version ".tar.gz"))
(sha256
(base32
- "0shawgpax79gvjrj0a313sll9gaqys7q1hxngn6j4k24lmz7bwki"))))
+ "1144l3ypz3bngxd59lb4y74xa401w92lhvvjgxzglmvbh8wzkcbb"))))
(build-system python-build-system)
(native-inputs
`(("python-setuptools" ,python-setuptools)))
@@ -5786,14 +5850,14 @@ responses, rather than doing any computation.")
(define-public python-cryptography
(package
(name "python-cryptography")
- (version "1.2.3")
+ (version "1.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cryptography" version))
(sha256
(base32
- "0kj511z4g21fhcr649pyzpl0zzkkc7hsgxxjys6z8wwfvmvirccf"))))
+ "1qjkrpfvxcyd0kal3zpm5y7f9p3y77ixn9jw8f4dqpgrw1sn3cxl"))))
(build-system python-build-system)
(inputs
`(("openssl" ,openssl)))
@@ -5837,7 +5901,7 @@ message digests and key derivation functions.")
(define-public python-pyopenssl
(package
(name "python-pyopenssl")
- (version "0.15.1")
+ (version "16.0.0")
(source
(origin
(method url-fetch)
@@ -5845,29 +5909,8 @@ message digests and key derivation functions.")
"pyOpenSSL/pyOpenSSL-" version ".tar.gz"))
(sha256
(base32
- "0wnnq15rhj7fhdcd8ycwiw6r6g3w9f9lcy6cigg8226vsrq618ph"))))
+ "0zfijaxlq4vgi6jz0d4i5xq9ygqnyps6br7lmigjhqnh8gp10g9n"))))
(build-system python-build-system)
- (arguments
- `(#:phases
- (modify-phases %standard-phases
- (add-after 'unpack 'fix-tests
- (lambda* (#:key inputs #:allow-other-keys)
- (substitute* "OpenSSL/test/test_ssl.py"
- (("client\\.connect\\(\\('verisign\\.com', 443\\)\\)")
- "return True")
- ;; FIXME: disable broken test
- (("test_set_tmp_ecdh") "disabled__set_tmp_ecdh"))
- (substitute* "OpenSSL/test/test_crypto.py"
- (("command = b\"openssl \"")
- (string-append "command = b\""
- (assoc-ref inputs "openssl")
- "/bin/openssl" " \""))
- ;; FIXME: disable four broken tests
- (("test_der") "disabled__der")
- (("test_digest") "disabled__digest")
- (("test_get_extension") "disabled__get_extension")
- (("test_extension_count") "disabled__extension_count"))
- #t)))))
(propagated-inputs
`(("python-cryptography" ,python-cryptography)
("python-six" ,python-six)))
@@ -6025,7 +6068,10 @@ Python's @code{ctypes} foreign function interface (FFI).")
#t))))))
(inputs `(("file" ,file)))
(self-native-input? #f)
- (synopsis "Python bindings to the libmagic file type guesser")))
+ (synopsis "Python bindings to the libmagic file type guesser. Note that
+this module and the python-magic module both provide a \"magic.py\" file;
+these two modules, which are different and were developed separately, both
+serve the same purpose: provide Python bindings for libmagic.")))
(define-public python2-file
(package-with-python2 python-file))
@@ -6736,13 +6782,13 @@ WebSocket usage in Python programs.")
(define-public python-atomicwrites
(package
(name "python-atomicwrites")
- (version "0.1.9")
+ (version "1.0.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "atomicwrites" version))
(sha256
(base32
- "08s05h211r07vs66r4din3swrbzb344vli041fihpg34q3lcxpvw"))))
+ "019fa4771q7fb1167yfbh6msdzcqini6v7i59rmf72mzdjd7x5qv"))))
(build-system python-build-system)
(synopsis "Atomic file writes in Python")
(description "Library for atomic file writes using platform dependent tools
@@ -7200,9 +7246,9 @@ authenticated session objects providing things like keep-alive.")
3.2.3 for use with older versions of Python and PyPy.")
(license license:expat)))
-(define-public python-futures
+(define-public python2-futures
(package
- (name "python-futures")
+ (name "python2-futures")
(version "3.0.3")
(source
(origin
@@ -7212,8 +7258,9 @@ authenticated session objects providing things like keep-alive.")
(base32
"1vcb34dqhzkhbq1957vdjszhhm5y3j9ba88dgwhqx2zynhmk9qig"))))
(build-system python-build-system)
+ (arguments `(#:python ,python-2))
(native-inputs
- `(("python-setuptools" ,python-setuptools)))
+ `(("python2-setuptools" ,python2-setuptools)))
(home-page "https://github.com/agronholm/pythonfutures")
(synopsis
"Backport of the concurrent.futures package from Python 3.2")
@@ -7223,9 +7270,6 @@ asynchronously executing callables. This package backports the
concurrent.futures package from Python 3.2")
(license bsd-3)))
-(define-public python2-futures
- (package-with-python2 python-futures))
-
(define-public python-urllib3
(package
(name "python-urllib3")
@@ -8459,3 +8503,103 @@ is made as zipfile like as possible.")
(define-public python2-rarfile
(package-with-python2 python-rarfile))
+
+(define-public python-magic
+ (package
+ (name "python-magic")
+ (version "0.4.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/ahupp/python-magic/archive/"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "17bgy92i7sb021f2s4mw1dcvpm6p1mi9jihridwy1pyn8mzvpjgk"))
+ (file-name (string-append name "-" version "-checkout"))))
+ (build-system python-build-system)
+ (arguments
+ ;; The tests are unreliable, so don't run them. The tests fail
+ ;; under Python3 because they were written for Python2 and
+ ;; contain import statements that do not work in Python3. One of
+ ;; the tests fails under Python2 because its assertions are
+ ;; overly stringent; it relies on comparing output strings which
+ ;; are brittle and can change depending on the version of
+ ;; libmagic being used and the system on which the test is
+ ;; running. In my case, under GuixSD 0.10.0, only one test
+ ;; failed, and it seems to have failed only because the version
+ ;; of libmagic that is packaged in Guix outputs a slightly
+ ;; different (but not wrong) string than the one that the test
+ ;; expected.
+ '(#:tests? #f
+ #:phases (modify-phases %standard-phases
+ ;; Replace a specific method call with a hard-coded
+ ;; path to the necessary libmagic.so file in the
+ ;; store. If we don't do this, then the method call
+ ;; will fail to find the libmagic.so file, which in
+ ;; turn will cause any application using
+ ;; python-magic to fail.
+ (add-before 'build 'hard-code-path-to-libmagic
+ (lambda* (#:key inputs #:allow-other-keys)
+ (let ((file (assoc-ref inputs "file")))
+ (substitute* "magic.py"
+ (("ctypes.util.find_library\\('magic'\\)")
+ (string-append "'" file "/lib/libmagic.so'")))
+ #t))))))
+ (native-inputs
+ `(("python-setuptools" ,python-setuptools)))
+ (inputs
+ ;; python-magic needs to be able to find libmagic.so.
+ `(("file" ,file)))
+ (home-page "https://github.com/ahupp/python-magic")
+ (synopsis "File type identification using libmagic")
+ (description
+ "This module uses ctypes to access the libmagic file type
+identification library. It makes use of the local magic database and
+supports both textual and MIME-type output. Note that this module and
+the python-file module both provide a \"magic.py\" file; these two
+modules, which are different and were developed separately, both serve
+the same purpose: to provide Python bindings for libmagic.")
+ (license license:expat)))
+
+(define-public python2-magic
+ (package-with-python2 python-magic))
+
+(define-public python2-s3cmd
+ (package
+ (name "python2-s3cmd")
+ (version "1.6.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "mirror://sourceforge/s3tools/"
+ "s3cmd-" version ".tar.gz"))
+ (sha256
+ (base32
+ "0ki1rzhm5icvi9ry5jswi4b22yqwyj0d2wsqsgilwx6qhi7pjxa6"))))
+ (build-system python-build-system)
+ (arguments
+ ;; s3cmd is written for python2 only and contains no tests.
+ `(#:python ,python-2
+ #:tests? #f))
+ (native-inputs
+ `(("python2-setuptools" ,python2-setuptools)))
+ (inputs
+ `(("python2-dateutil" ,python2-dateutil)
+ ;; The python-file package also provides a magic.py module.
+ ;; This is an unfortunate state of affairs; however, s3cmd
+ ;; fails to install if it cannot find specifically the
+ ;; python-magic package. Thus we include it, instead of using
+ ;; python-file. Ironically, s3cmd sometimes works better
+ ;; without libmagic bindings at all:
+ ;; https://github.com/s3tools/s3cmd/issues/198
+ ("python2-magic" ,python2-magic)))
+ (home-page "http://s3tools.org/s3cmd")
+ (synopsis "Command line tool for S3-compatible storage services")
+ (description
+ "S3cmd is a command line tool for uploading, retrieving and managing data
+in storage services that are compatible with the Amazon Simple Storage
+Service (S3) protocol, including S3 itself. It supports rsync-like backup,
+GnuPG encryption, and more. It also supports management of Amazon's
+CloudFront content delivery network.")
+ (license gpl2+)))
diff --git a/gnu/packages/ruby.scm b/gnu/packages/ruby.scm
index 2abb261a45..0ca3415a9f 100644
--- a/gnu/packages/ruby.scm
+++ b/gnu/packages/ruby.scm
@@ -121,7 +121,7 @@ a focus on simplicity and productivity.")
(define-public ruby-2.1
(package (inherit ruby)
- (version "2.1.8")
+ (version "2.1.10")
(source
(origin
(method url-fetch)
@@ -130,7 +130,7 @@ a focus on simplicity and productivity.")
"/ruby-" version ".tar.bz2"))
(sha256
(base32
- "11rkbfc90cg9p9mzg32475alf3ddcn9q8a3ar3fwm5xskic0n395"))))
+ "1wglbd599mlwxfcb2xgqcxi2shr363pjn5dpbv11m04si9bpaim7"))))
(arguments
`(#:test-target "test"
#:parallel-tests? #f
diff --git a/gnu/packages/scheme.scm b/gnu/packages/scheme.scm
index 00b573fc0b..50533b9a29 100644
--- a/gnu/packages/scheme.scm
+++ b/gnu/packages/scheme.scm
@@ -2,6 +2,8 @@
;;; Copyright © 2013, 2014, 2015 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
;;; Copyright © 2015 Federico Beffa <beffa@fbengineering.ch>
+;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -35,6 +37,7 @@
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages avahi)
#:use-module (gnu packages libphidget)
+ #:use-module (gnu packages gcc)
#:use-module (gnu packages glib)
#:use-module (gnu packages gtk)
#:use-module (gnu packages libffi)
@@ -309,14 +312,14 @@ mashups, office (web agendas, mail clients, ...), etc.")
(define-public chicken
(package
(name "chicken")
- (version "4.9.0.1")
+ (version "4.10.0")
(source (origin
(method url-fetch)
- (uri (string-append "http://code.call-cc.org/releases/4.9.0/chicken-"
- version ".tar.gz"))
+ (uri (string-append "http://code.call-cc.org/releases/"
+ version "/chicken-" version ".tar.gz"))
(sha256
(base32
- "0598mar1qswfd8hva9nqs88zjn02lzkqd8fzdd21dz1nki1prpq4"))))
+ "16w96jrhb6qf62fgznk53f55yhfv81damghdjn31k5hirnmza1qf"))))
(build-system gnu-build-system)
(arguments
`(#:modules ((guix build gnu-build-system)
@@ -325,11 +328,19 @@ mashups, office (web agendas, mail clients, ...), etc.")
;; No `configure' script; run "make check" after "make install" as
;; prescribed by README.
- #:phases (alist-cons-after
- 'install 'check
- (assoc-ref %standard-phases 'check)
- (fold alist-delete %standard-phases
- '(configure check)))
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (delete 'check)
+ (add-after 'install 'check
+ (assoc-ref %standard-phases 'check))
+ (add-after 'unpack 'disable-broken-tests
+ (lambda _
+ ;; The port tests fail with this error:
+ ;; Error: (line 294) invalid escape-sequence '\x o'
+ (substitute* "tests/runtests.sh"
+ (("\\$interpret -s port-tests\\.scm") ""))
+ #t)))
#:make-flags (let ((out (assoc-ref %outputs "out")))
(list "PLATFORM=linux"
@@ -338,6 +349,12 @@ mashups, office (web agendas, mail clients, ...), etc.")
;; Parallel builds are not supported, as noted in README.
#:parallel-build? #f))
+ ;; One of the tests ("testing direct invocation can detect calls of too
+ ;; many arguments...") times out when building with a more recent GCC.
+ ;; The problem was reported here:
+ ;; https://lists.gnu.org/archive/html/chicken-hackers/2015-04/msg00059.html
+ (native-inputs
+ `(("gcc" ,gcc-4.8)))
(home-page "http://www.call-cc.org/")
(synopsis "R5RS Scheme implementation that compiles native code via C")
(description
@@ -349,14 +366,14 @@ language standard, and includes many enhancements and extensions.")
(define-public scheme48
(package
(name "scheme48")
- (version "1.9")
+ (version "1.9.2")
(source (origin
(method url-fetch)
(uri (string-append "http://s48.org/" version
"/scheme48-" version ".tgz"))
(sha256
(base32
- "0rw2lz5xgld0klvld292ds6hvfk5l12vskzgf1hhwjdpa38r3fnw"))
+ "1x4xfm3lyz2piqcw1h01vbs1iq89zq7wrsfjgh3fxnlm1slj2jcw"))
(patches (list (search-patch "scheme48-tests.patch")))))
(build-system gnu-build-system)
(home-page "http://s48.org/")
diff --git a/gnu/packages/sdl.scm b/gnu/packages/sdl.scm
index 825e7db5d9..458fdc599f 100644
--- a/gnu/packages/sdl.scm
+++ b/gnu/packages/sdl.scm
@@ -27,6 +27,7 @@
#:use-module (guix download)
#:use-module (guix build-system gnu)
#:use-module (guix build-system trivial)
+ #:use-module (gnu packages audio)
#:use-module (gnu packages fontutils)
#:use-module (gnu packages guile)
#:use-module (gnu packages image)
@@ -94,7 +95,7 @@ joystick, and graphics hardware.")
(define sdl2
(package (inherit sdl)
(name "sdl2")
- (version "2.0.3")
+ (version "2.0.4")
(source (origin
(method url-fetch)
(uri
@@ -102,7 +103,7 @@ joystick, and graphics hardware.")
version ".tar.gz"))
(sha256
(base32
- "0369ngvb46x6c26h8zva4x22ywgy6mvn0wx87xqwxg40pxm9m9m5"))))
+ "0jqp46mxxbh9lhpx1ih6sp93k752j2smhpc0ad0q4cb3px0famfs"))))
(license bsd-3)))
(define libmikmod
@@ -216,7 +217,8 @@ WEBP, XCF, XPM, and XV.")
(inputs `(("libvorbis" ,libvorbis)
("libflac" ,flac)
("libmad" ,libmad)
- ("libmikmod" ,libmikmod)))
+ ("libmikmod" ,libmikmod)
+ ("libmodplug" ,libmodplug)))
;; FIXME: Add libfluidsynth
(propagated-inputs `(("sdl" ,sdl)))
(synopsis "SDL multi-channel audio mixer library")
@@ -310,7 +312,7 @@ directory.")
(define-public sdl2-image
(package (inherit sdl-image)
(name "sdl2-image")
- (version "2.0.0")
+ (version "2.0.1")
(source (origin
(method url-fetch)
(uri
@@ -318,37 +320,45 @@ directory.")
version ".tar.gz"))
(sha256
(base32
- "0d3jlhkmr0j5a2dd5h6y29jfcsj7mkl16wghm6n3nqqp7g3ib65j"))))
+ "0r3z1l7fdn76qkpy7snpkcjqz8dkv2zp6lsqpq25q4m5xsyaygis"))))
(propagated-inputs
(propagated-inputs-with-sdl2 sdl-image))))
(define-public sdl2-mixer
(package (inherit sdl-mixer)
(name "sdl2-mixer")
- (version "2.0.0")
+ (version "2.0.1")
(source (origin
(method url-fetch)
(uri
(string-append "http://www.libsdl.org/projects/SDL_mixer/release/SDL2_mixer-"
version ".tar.gz"))
+ (modules '((guix build utils)))
+ (snippet
+ ;; Remove bundled libraries.
+ '(delete-file-recursively "external"))
(sha256
(base32
- "0nvjdxjchrajrn0jag877hdx9zb788hsd315zzg1lyck2wb0xkm8"))))
+ "0pv9jzjpcjlbiaybvwrb4avmv46qk7iqxlnqrd2dfj82c4mgc92s"))))
(propagated-inputs
(propagated-inputs-with-sdl2 sdl-mixer))))
(define-public sdl2-ttf
(package (inherit sdl-ttf)
(name "sdl2-ttf")
- (version "2.0.12")
+ (version "2.0.14")
(source (origin
(method url-fetch)
(uri
(string-append "http://www.libsdl.org/projects/SDL_ttf/release/SDL2_ttf-"
version ".tar.gz"))
+ (modules '((guix build utils)))
+ (snippet
+ ;; Remove bundled libraries.
+ '(delete-file-recursively "external"))
(sha256
(base32
- "0vkg6lyj278mdpd52map3rfi65fbq16w67ahmmfcl77a8da60a47"))))
+ "0xljwcpvd2knrjdfag5b257xqayplz55mqlszrqp0kpnphh5xnrl"))))
(propagated-inputs
(propagated-inputs-with-sdl2 sdl-ttf))))
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 15c68238e2..9c197f4977 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -33,6 +33,8 @@
#:use-module (gnu packages curl)
#:use-module (gnu packages gcc)
#:use-module (gnu packages gtk)
+ #:use-module (gnu packages gettext)
+ #:use-module (gnu packages glib)
#:use-module (gnu packages haskell)
#:use-module (gnu packages icu4c)
#:use-module (gnu packages image)
@@ -53,6 +55,45 @@
#:use-module (gnu packages zip)
#:use-module (srfi srfi-1))
+
+(define-public pspp
+ (package
+ (name "pspp")
+ (version "0.10.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "mirror://gnu/pspp/pspp-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "0xw61kq0hxh7f6a4yjhnqbhc0fj9r3wb3qnpq05qhdp79n30ik24"))))
+ (build-system gnu-build-system)
+ (inputs
+ `(("cairo" ,cairo)
+ ("gettext" ,gnu-gettext)
+ ("gsl" ,gsl)
+ ("libxml2" ,libxml2)
+ ("pango" ,pango)
+ ("readline" ,readline)
+ ("gtk" ,gtk+)
+ ("gtksourceview" ,gtksourceview)
+ ("zlib" ,zlib)))
+ (native-inputs
+ `(("glib" ,glib "bin") ;for glib-genmarshal
+ ("perl" ,perl)
+ ("pkg-config" ,pkg-config)))
+ (home-page "http://www.gnu.org/software/pspp/")
+ (synopsis "Statistical analysis")
+ (description
+ "GNU PSPP is a statistical analysis program. It can perform
+descriptive statistics, T-tests, linear regression and non-parametric tests.
+It features both a graphical interface as well as command-line input. PSPP
+is designed to interoperate with Gnumeric, LibreOffice and OpenOffice. Data
+can be imported from spreadsheets, text files and database sources and it can
+be output in text, PostScript, PDF or HTML.")
+ (license license:gpl3+)))
+
(define-public r
(package
(name "r")
@@ -1234,13 +1275,13 @@ informative error messages when it's not available.")
(define-public r-devtools
(package
(name "r-devtools")
- (version "1.9.1")
+ (version "1.10.0")
(source (origin
(method url-fetch)
(uri (cran-uri "devtools" version))
(sha256
(base32
- "10ycx3kkiz5x8nmgw31d9wa5hhlx2fhda2nqzxfrczqpz1jik6ci"))))
+ "11x51bqhjwypbxv5sfnrnxx06b92k8kzmmx7zrwk3537r072b6pa"))))
(build-system r-build-system)
(propagated-inputs
`(("r-curl" ,r-curl)
@@ -1253,13 +1294,33 @@ informative error messages when it's not available.")
("r-roxygen2" ,r-roxygen2)
("r-rstudioapi" ,r-rstudioapi)
("r-rversions" ,r-rversions)
- ("r-whisker" ,r-whisker)))
+ ("r-whisker" ,r-whisker)
+ ("r-withr" ,r-withr)))
(home-page "https://github.com/hadley/devtools")
(synopsis "Tools to make developing R packages easier")
(description "The devtools package is a collection of package development
tools to simplify the devolpment of R packages.")
(license license:gpl2+)))
+(define-public r-withr
+ (package
+ (name "r-withr")
+ (version "1.0.1")
+ (source (origin
+ (method url-fetch)
+ (uri (cran-uri "withr" version))
+ (sha256
+ (base32
+ "0zbj3rd7dc0ycknmay7y7rm1qvnh9n05jw93gjggz46j2zfmy93y"))))
+ (build-system r-build-system)
+ (home-page "https://github.com/jimhester/withr")
+ (synopsis "Run code with temporarily modified global state")
+ (description
+ "This package provides a set of functions to run R code in an environment
+in which global state has been temporarily modified. Many of these functions
+were originally a part of the r-devtools package.")
+ (license license:gpl2+)))
+
(define-public r-readr
(package
(name "r-readr")
@@ -2026,3 +2087,24 @@ directly from R. Once uploaded to a plotly account, plotly graphs (and the
data behind them) can be viewed and modified in a web browser.")
(license license:x11)))
+
+(define-public r-ztable
+ (package
+ (name "r-ztable")
+ (version "0.1.5")
+ (source (origin
+ (method url-fetch)
+ (uri (cran-uri "ztable" version))
+ (sha256
+ (base32
+ "1jfqnqy9544gfvz3bsb48v4177nwp4b4n9l2743asq8sbq305b5r"))))
+ (build-system r-build-system)
+ (home-page "http://cran.r-project.org/web/packages/ztable")
+ (synopsis "Zebra-striped tables in LaTeX and HTML formats for R")
+ (description
+ "This package provides functions to make zebra-striped tables (tables
+with alternating row colors) in LaTeX and HTML formats easily from
+@code{data.frame}, @code{matrix}, @code{lm}, @code{aov}, @code{anova},
+@code{glm}, @code{coxph}, @code{nls}, @code{fitdistr}, @code{mytable} and
+@code{cbind.mytable} objects.")
+ (license license:gpl2+)))
diff --git a/gnu/packages/telephony.scm b/gnu/packages/telephony.scm
index 3f4ab56091..76e369a563 100644
--- a/gnu/packages/telephony.scm
+++ b/gnu/packages/telephony.scm
@@ -191,14 +191,14 @@ internet.")
(define-public libsrtp
(package
(name "libsrtp")
- (version "1.5.2")
+ (version "1.5.4")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/cisco/libsrtp/archive/v"
version ".tar.gz"))
(sha256
(base32
- "1njf62f6sazz2q7qc4j495v1pga385whkmxxyr8hfz1ragiyzqc6"))))
+ "1w2g623qkd7gdyydglx2hr4s2y237lg0nszjmy7z8d2iq8hvb9sn"))))
(native-inputs
`(("procps" ,procps)))
(build-system gnu-build-system)
diff --git a/gnu/packages/texinfo.scm b/gnu/packages/texinfo.scm
index 8b9ed00de7..51497030c2 100644
--- a/gnu/packages/texinfo.scm
+++ b/gnu/packages/texinfo.scm
@@ -89,6 +89,41 @@ is on expressing the content semantically, avoiding physical markup commands.")
(native-inputs '())
(inputs `(("ncurses" ,ncurses) ("xz" ,xz)))))
+(define-public info-reader
+ ;; The idea of this package is to have the standalone Info reader without
+ ;; the dependency on Perl that 'makeinfo' drags.
+ (package
+ (inherit texinfo-6.1)
+ (name "info-reader")
+ (arguments
+ `(#:disallowed-references ,(assoc-ref (package-inputs texinfo-6.1)
+ "perl")
+
+ #:modules ((ice-9 ftw) (srfi srfi-1)
+ ,@%gnu-build-system-modules)
+
+ #:phases (modify-phases %standard-phases
+ (add-after 'install 'keep-only-info-reader
+ (lambda* (#:key outputs #:allow-other-keys)
+ ;; Remove everything but 'bin/info' and associated
+ ;; files.
+ (define (files)
+ (scandir "." (lambda (file)
+ (not (member file '("." ".."))))))
+
+ (let ((out (assoc-ref outputs "out")))
+ (with-directory-excursion out
+ (for-each delete-file-recursively
+ (fold delete (files) '("bin" "share"))))
+ (with-directory-excursion (string-append out "/bin")
+ (for-each delete-file (delete "info" (files))))
+ (with-directory-excursion (string-append out "/share")
+ (for-each delete-file-recursively
+ (fold delete (files)
+ '("info" "locale"))))
+ #t))))))
+ (synopsis "Standalone Info documentation reader")))
+
(define-public texi2html
(package
(name "texi2html")
diff --git a/gnu/packages/textutils.scm b/gnu/packages/textutils.scm
index 73a0532478..71cf25b224 100644
--- a/gnu/packages/textutils.scm
+++ b/gnu/packages/textutils.scm
@@ -3,6 +3,7 @@
;;; Copyright © 2015, 2016 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015, 2016 Ben Woodcroft <donttrustben@gmail.com>
;;; Copyright © 2015 Roel Janssen <roel@gnu.org>
+;;; Copyright © 2016 Jelle Licht <jlicht@fsfe.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -271,3 +272,23 @@ Consequently, the computation has a flat performance characteristic,
correlated with data variation rather than file size. pfff can be as reliable
as existing hashing techniques, with provably negligible risk of collisions.")
(license license:bsd-3)))
+
+(define-public oniguruma
+ (package
+ (name "oniguruma")
+ (version "5.9.6")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/kkos/"
+ "oniguruma/releases/download/v" version
+ "/onig-" version ".tar.gz"))
+ (sha256
+ (base32
+ "19s79vsclqn170mw0ajwv7j37qsbn4f1yjz3yavnhvva6c820r6m"))))
+ (build-system gnu-build-system)
+ (home-page "https://github.com/kkos/oniguruma")
+ (synopsis "Regular expression library")
+ (description "Oniguruma is a regular expressions library. The special
+characteristic of this library is that different character encoding for every
+regular expression object can be specified.")
+ (license license:bsd-2)))
diff --git a/gnu/packages/tls.scm b/gnu/packages/tls.scm
index 8132ef2053..61fb651552 100644
--- a/gnu/packages/tls.scm
+++ b/gnu/packages/tls.scm
@@ -6,6 +6,7 @@
;;; Copyright © 2015 David Thompson <davet@gnu.org>
;;; Copyright © 2015 Leo Famulari <leo@famulari.name>
;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2016 Nils Gillmann <niasterisk@grrlz.net>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -179,22 +180,21 @@ required structures.")
(define-public openssl
(package
- (replacement openssl-1.0.2g)
(name "openssl")
- (version "1.0.2f")
+ (version "1.0.2g")
(source (origin
- (method url-fetch)
- (uri (list (string-append "ftp://ftp.openssl.org/source/"
- name "-" version ".tar.gz")
- (string-append "ftp://ftp.openssl.org/source/old/"
- (string-trim-right version char-set:letter)
- "/" name "-" version ".tar.gz")))
- (sha256
- (base32
- "171fkdg9v6j29d962nh6kb79kfm8kkhy7n9makw39d7jvvj4wawk"))
- (patches (map search-patch
- '("openssl-runpath.patch"
- "openssl-c-rehash.patch")))))
+ (method url-fetch)
+ (uri (list (string-append "ftp://ftp.openssl.org/source/"
+ name "-" version ".tar.gz")
+ (string-append "ftp://ftp.openssl.org/source/old/"
+ (string-trim-right version char-set:letter)
+ "/" name "-" version ".tar.gz")))
+ (sha256
+ (base32
+ "0cxajjayi859czi545ddafi24m9nwsnjsw4q82zrmqvwj2rv315p"))
+ (patches (map search-patch
+ '("openssl-runpath.patch"
+ "openssl-c-rehash-in.patch")))))
(build-system gnu-build-system)
(native-inputs `(("perl" ,perl)))
(arguments
@@ -287,64 +287,10 @@ required structures.")
(license license:openssl)
(home-page "http://www.openssl.org/")))
-(define openssl-1.0.2g
- (package
- (inherit openssl)
- (replacement #f)
- (source
- (let ((name "openssl") (version "1.0.2g"))
- (origin
- (method url-fetch)
- (uri (list (string-append "ftp://ftp.openssl.org/source/"
- name "-" version ".tar.gz")
- (string-append "ftp://ftp.openssl.org/source/old/"
- (string-trim-right version char-set:letter)
- "/" name "-" version ".tar.gz")))
- (sha256
- (base32
- "0cxajjayi859czi545ddafi24m9nwsnjsw4q82zrmqvwj2rv315p"))
- (patches (map search-patch
- '("openssl-runpath.patch"
- "openssl-c-rehash-in.patch"))))))
- (arguments
- (substitute-keyword-arguments (package-arguments openssl)
- ((#:phases phases)
- `(modify-phases ,phases
- (replace 'configure
- (lambda* (#:key outputs #:allow-other-keys)
- (let ((out (assoc-ref outputs "out")))
- (zero?
- (system*
- "./config"
-
- ;; XXX TEMPORARY, FOR GRAFTING ONLY
- ;; Enable ssl2 code to preserve
- ;; ABI compatibility with 1.0.2f
- "enable-ssl2"
-
- "shared" ;build shared libraries
- "--libdir=lib"
-
- ;; The default for this catch-all directory is
- ;; PREFIX/ssl. Change that to something more
- ;; conventional.
- (string-append "--openssldir=" out
- "/share/openssl-" ,(package-version openssl))
-
- (string-append "--prefix=" out)
-
- ;; XXX FIXME: Work around a code generation bug in GCC
- ;; 4.9.3 on ARM when compiled with -mfpu=neon. See:
- ;; <https://gcc.gnu.org/bugzilla/show_bug.cgi?id=66917>
- ,@(if (and (not (%current-target-system))
- (string-prefix? "armhf" (%current-system)))
- '("-mfpu=vfpv3")
- '()))))))))))))
-
(define-public libressl
(package
(name "libressl")
- (version "2.2.6")
+ (version "2.3.3")
(source
(origin
(method url-fetch)
@@ -352,7 +298,7 @@ required structures.")
"http://ftp.openbsd.org/pub/OpenBSD/LibreSSL/libressl-"
version ".tar.gz"))
(sha256 (base32
- "0kynb15l5gq1qgp3p4ncn20sc65sbl8lk89vyr07s17xrya9kq8y"))))
+ "1a8anm8nsfyxds03csk738m2cmzjbsb867my1rz5ij3w31k32wvn"))))
(build-system gnu-build-system)
(native-search-paths
;; FIXME: These two variables must designate a single file or directory
diff --git a/gnu/packages/version-control.scm b/gnu/packages/version-control.scm
index 7d7276abac..0b70d545b9 100644
--- a/gnu/packages/version-control.scm
+++ b/gnu/packages/version-control.scm
@@ -364,6 +364,67 @@ write native speed custom Git applications in any language with bindings.")
;; GPLv2 with linking exception
(license gpl2)))
+(define-public cgit
+ (package
+ (name "cgit")
+ (version "0.12")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append
+ "https://git.zx2c4.com/cgit/snapshot/cgit-"
+ version ".tar.xz"))
+ (sha256
+ (base32
+ "1dx54hgfyabmg9nm5qp6d01f54nlbqbbdwhwl0llb9imjf237qif"))))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:tests? #f ; XXX: fail to build the in-source git.
+ #:test-target "test"
+ #:make-flags '("CC=gcc" "SHELL_PATH=sh")
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'unpack-git
+ (lambda* (#:key inputs #:allow-other-keys)
+ ;; Unpack the source of git into the 'git' directory.
+ (zero? (system*
+ "tar" "--strip-components=1" "-C" "git" "-xf"
+ (assoc-ref inputs "git:src")))))
+ (delete 'configure) ; no configure script
+ (add-after 'build 'build-man
+ (lambda* (#:key make-flags #:allow-other-keys)
+ (zero? (apply system* `("make" ,@make-flags "doc-man")))))
+ (replace 'install
+ (lambda* (#:key make-flags outputs #:allow-other-keys)
+ (let ((out (assoc-ref outputs "out")))
+ (and (zero? (apply system*
+ `("make" ,@make-flags
+ ,(string-append "prefix=" out)
+ ,(string-append
+ "CGIT_SCRIPT_PATH=" out "/share/cgit")
+ "install" "install-man")))
+ ;; Move the platform-dependent 'cgit.cgi' into lib
+ ;; to get it stripped.
+ (rename-file (string-append out "/share/cgit/cgit.cgi")
+ (string-append out "/lib/cgit/cgit.cgi"))
+ #t)))))))
+ (native-inputs
+ ;; For building manpage.
+ `(("asciidoc" ,asciidoc)
+ ("docbook-xml" ,docbook-xml)
+ ("docbook-xsl" ,docbook-xsl)
+ ("xmllint" ,libxml2)
+ ("xsltprot" ,libxslt)))
+ (inputs
+ `(("git:src" ,(package-source git))
+ ("openssl" ,openssl)
+ ("zlib" ,zlib)))
+ (home-page "https://git.zx2c4.com/cgit/")
+ (synopsis "Web frontend for git repositories")
+ (description
+ "CGit is an attempt to create a fast web interface for the Git SCM, using
+a built-in cache to decrease server I/O pressure.")
+ (license gpl2)))
+
(define-public shflags
(package
(name "shflags")
@@ -545,14 +606,14 @@ control to Git repositories.")
(define-public mercurial
(package
(name "mercurial")
- (version "3.7.2")
+ (version "3.7.3")
(source (origin
(method url-fetch)
(uri (string-append "https://www.mercurial-scm.org/"
"release/mercurial-" version ".tar.gz"))
(sha256
(base32
- "0ykdvj7k4yxiwbfk0gnrq2flmdlf2cracsvqn3vr7nxhda6l7aav"))))
+ "0c2vkad9piqkggyk8y310rf619qgdfcwswnk3nv21mg2fhnw96f0"))))
(build-system python-build-system)
(arguments
`(;; Restrict to Python 2, as Python 3 would require
@@ -1048,15 +1109,16 @@ Mercurial, Bazaar, Darcs, CVS, Fossil, and Veracity.")
(base32
"196g3jkaybjx11nbr51n0cjps3wjzb145ab76y717diqvvxp5v4r"))))
(build-system python-build-system)
+ (arguments `(#:python ,python-2))
(native-inputs
- `(("python-setuptools" ,python-setuptools)
+ `(("python2-setuptools" ,python2-setuptools)
;; for the tests
- ("python-six" ,python-six)))
+ ("python2-six" ,python2-six)))
(propagated-inputs
- `(("python-dateutil" ,python-dateutil-2)
- ("python-futures" ,python-futures)
- ("python-rauth" ,python-rauth)
- ("python-swiftclient" ,python-swiftclient)))
+ `(("python2-dateutil" ,python2-dateutil-2)
+ ("python2-futures" ,python2-futures)
+ ("python2-rauth" ,python2-rauth)
+ ("python2-swiftclient" ,python2-swiftclient)))
(home-page "https://github.com/Schnouki/git-annex-remote-hubic/")
(synopsis "Use hubic as a git-annex remote")
(description
diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm
index a870dd8ee1..8f93950e97 100644
--- a/gnu/packages/video.scm
+++ b/gnu/packages/video.scm
@@ -372,14 +372,14 @@ standards (MPEG-2, MPEG-4 ASP/H.263, MPEG-4 AVC/H.264, and VC-1/VMW3).")
(define-public ffmpeg
(package
(name "ffmpeg")
- (version "2.8.6")
+ (version "3.0")
(source (origin
(method url-fetch)
(uri (string-append "https://ffmpeg.org/releases/ffmpeg-"
version ".tar.xz"))
(sha256
(base32
- "1yh7dvm7zwdlsspdaq524s5qaggma5md9h95qc4kvb5dmyyyvg15"))))
+ "0w74b165l4ry4y72f4xmgd357pvbc7yr61y313v3ai6787p2rwqj"))))
(build-system gnu-build-system)
(inputs
`(("fontconfig" ,fontconfig)
@@ -392,7 +392,6 @@ standards (MPEG-2, MPEG-4 ASP/H.263, MPEG-4 AVC/H.264, and VC-1/VMW3).")
("libbluray" ,libbluray)
("libcaca" ,libcaca)
("libcdio-paranoia" ,libcdio-paranoia)
- ("libquvi" ,libquvi)
("libtheora" ,libtheora)
("libvdpau" ,libvdpau)
("libvorbis" ,libvorbis)
@@ -480,7 +479,6 @@ standards (MPEG-2, MPEG-4 ASP/H.263, MPEG-4 AVC/H.264, and VC-1/VMW3).")
"--enable-libmp3lame"
"--enable-libopus"
"--enable-libpulse"
- "--enable-libquvi"
"--enable-libsoxr"
"--enable-libspeex"
"--enable-libtheora"
@@ -498,7 +496,7 @@ standards (MPEG-2, MPEG-4 ASP/H.263, MPEG-4 AVC/H.264, and VC-1/VMW3).")
;; Runtime cpu detection is not implemented on
;; MIPS, so we disable some features.
"--disable-mips32r2"
- "--disable-mipsdspr1"
+ "--disable-mipsdsp"
"--disable-mipsdspr2"
"--disable-mipsfpu")
#:phases
@@ -604,7 +602,7 @@ treaming protocols.")
(define-public mplayer
(package
(name "mplayer")
- (version "1.2.1")
+ (version "1.3.0")
(source (origin
(method url-fetch)
(uri (string-append
@@ -612,7 +610,7 @@ treaming protocols.")
version ".tar.xz"))
(sha256
(base32
- "0prbqnsl6s7fbpp6nc6babx7gzwdrhrhzf0cmp6xz6w9gl4sy6w3"))))
+ "0hwqn04bdknb2ic88xd75smffxx63scvz0zvwvjb56nqj9n89l1s"))))
(build-system gnu-build-system)
;; FIXME: Add additional inputs once available.
(native-inputs
diff --git a/gnu/packages/vim.scm b/gnu/packages/vim.scm
index 241896323c..73433e955f 100644
--- a/gnu/packages/vim.scm
+++ b/gnu/packages/vim.scm
@@ -44,14 +44,13 @@
`(#:test-target "test"
#:parallel-tests? #f
#:phases
- (alist-cons-after
- 'configure 'patch-config-files
- (lambda _
- (substitute* "runtime/tools/mve.awk"
- (("/usr/bin/nawk") (which "gawk")))
- (substitute* "src/testdir/Makefile"
- (("/bin/sh") (which "sh"))))
- %standard-phases)))
+ (modify-phases %standard-phases
+ (add-after 'configure 'patch-config-files
+ (lambda _
+ (substitute* "runtime/tools/mve.awk"
+ (("/usr/bin/nawk") (which "gawk")))
+ (substitute* "src/testdir/Makefile"
+ (("/bin/sh") (which "sh"))))))))
(inputs
`(("gawk" ,gawk)
("inetutils" ,inetutils)
diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm
index 516e623f10..1f13474e95 100644
--- a/gnu/packages/web.scm
+++ b/gnu/packages/web.scm
@@ -7,6 +7,9 @@
;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
;;; Copyright © 2015, 2016 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
+;;; Copyright © 2016 Sou Bunnbu <iyzsong@gmail.com>
+;;; Copyright © 2016 Jelle Licht <jlicht@fsfe.org>
+;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -52,10 +55,12 @@
#:use-module (gnu packages python)
#:use-module (gnu packages pcre)
#:use-module (gnu packages pkg-config)
+ #:use-module (gnu packages valgrind)
#:use-module (gnu packages xml)
#:use-module (gnu packages curl)
#:use-module (gnu packages perl)
#:use-module (gnu packages texinfo)
+ #:use-module (gnu packages textutils)
#:use-module (gnu packages tls)
#:use-module (gnu packages statistics))
@@ -351,29 +356,19 @@ for efficient socket-like bidirectional reliable communication channels.")
(define-public libpsl
(package
(name "libpsl")
- (version "0.7.1")
+ (version "0.13.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/rockdaboot/libpsl/"
- "archive/libpsl-" version ".tar.gz"))
+ "releases/download/libpsl-" version
+ "/libpsl-" version ".tar.gz"))
(sha256
(base32
- "1k0klj668c9v0r4993vfs3kq773mzdz61vsigqw6v1mjcwnf1si3"))))
+ "0afn2c4s2m65xifa5sfdll0s2gyqbh2q9k9nq4nsmx1b6c2i3i7x"))))
(build-system gnu-build-system)
- (inputs `(("icu4c" ,icu4c)))
- ;; The release tarball lacks the generated files.
- (native-inputs `(("autoconf" ,autoconf)
- ("automake" ,automake)
- ("gettext" ,gnu-gettext)
- ("which" ,which)
- ("libtool" ,libtool)
- ("pkg-config" ,pkg-config)))
- (arguments
- `(#:phases (alist-cons-after
- 'unpack 'bootstrap
- (lambda _
- (zero? (system* "sh" "autogen.sh")))
- %standard-phases)))
+ (inputs
+ `(("icu4c" ,icu4c)
+ ("python-2" ,python-2)))
(home-page "https://github.com/rockdaboot/libpsl")
(synopsis "C library for the Publix Suffix List")
(description
@@ -3109,3 +3104,107 @@ callback or connection interfaces.")
"Gumbo is an implementation of the HTML5 parsing algorithm implemented as
a pure C99 library.")
(license l:asl2.0)))
+
+(define-public uwsgi
+ (package
+ (name "uwsgi")
+ (version "2.0.12")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "http://projects.unbit.it/downloads/uwsgi-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "02g46dnw5j1iw8fsq392bxbk8d21b9pdgb3ypcinv3b4jzdm2srh"))))
+ (build-system gnu-build-system)
+ (outputs '("out" "python"))
+ (arguments
+ '(;; XXX: The 'check' target runs cppcheck to do static code analysis.
+ ;; But there is no obvious way to run the real tests.
+ #:tests? #f
+ #:phases
+ (modify-phases %standard-phases
+ (replace 'configure
+ ;; Configuration is done by writing an ini file.
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (bindir (string-append out "/bin"))
+ (plugindir (string-append out "/lib/uwsgi")))
+ ;; The build phase outputs files to these directories directly.
+ (mkdir-p bindir)
+ (mkdir-p plugindir)
+ ;; XXX: Enable other plugins.
+ (call-with-output-file "buildconf/guix.ini"
+ (lambda (port)
+ (format port "[uwsgi]
+yaml = libyaml
+bin_name = ~a/uwsgi
+plugin_dir = ~a
+
+inherit = base
+plugins = cgi,python
+embedded_plugins =
+" bindir plugindir))))
+ (setenv "PROFILE" "guix")
+ #t))
+ (replace 'install
+ ;; Move plugins into their own output.
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (plugindir (string-append out "/lib/uwsgi"))
+ (python-plugin (string-append
+ plugindir "/python_plugin.so")))
+ (install-file python-plugin
+ (string-append
+ (assoc-ref outputs "python") "/lib/uwsgi"))
+ (delete-file python-plugin)
+ #t))))))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)
+ ("python" ,python-wrapper)))
+ (inputs
+ `(("jansson" ,jansson)
+ ("libxml2" ,libxml2)
+ ("libyaml" ,libyaml)
+ ("openssl" ,openssl)
+ ("pcre" ,pcre)
+ ("zlib" ,zlib)
+ ;; For plugins.
+ ("python" ,python)))
+ (home-page "https://uwsgi-docs.readthedocs.org/")
+ (synopsis "Application container server")
+ (description
+ "uWSGI presents a complete stack for networked/clustered web applications,
+implementing message/object passing, caching, RPC and process management.
+It uses the uwsgi protocol for all the networking/interprocess communications.")
+ (license l:gpl2+))) ; with linking exception
+
+(define-public jq
+ (package
+ (name "jq")
+ (version "1.5")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/stedolan/" name
+ "/releases/download/" name "-" version
+ "/" name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "0g29kyz4ykasdcrb0zmbrp2jqs9kv1wz9swx849i2d1ncknbzln4"))))
+ (inputs
+ `(("oniguruma" ,oniguruma)))
+ (native-inputs
+ `(;; TODO fix gems to generate documentation
+ ;;("ruby" ,ruby)
+ ;;("bundler" ,bundler)
+ ("valgrind" ,valgrind)))
+ (build-system gnu-build-system)
+ (home-page "http://stedolan.github.io/jq/")
+ (synopsis "Command-line JSON processor")
+ (description "jq is like sed for JSON data – you can use it to slice and
+filter and map and transform structured data with the same ease that sed, awk,
+grep and friends let you play with text. It is written in portable C. jq can
+mangle the data format that you have into the one that you want with very
+little effort, and the program to do so is often shorter and simpler than
+you'd expect.")
+ (license (list l:expat l:cc-by3.0))))
diff --git a/gnu/packages/webkit.scm b/gnu/packages/webkit.scm
index 3f2d11e70c..473d2e7cdc 100644
--- a/gnu/packages/webkit.scm
+++ b/gnu/packages/webkit.scm
@@ -53,14 +53,14 @@
(define-public webkitgtk
(package
(name "webkitgtk")
- (version "2.10.8")
+ (version "2.12.0")
(source (origin
(method url-fetch)
(uri (string-append "http://www.webkitgtk.org/releases/"
name "-" version ".tar.xz"))
(sha256
(base32
- "1a98z7fa8vxk7y2hlbnkl767908anyyxbwkyiar5gi037yr84dii"))))
+ "19jyvyw8ss4bacq3f7ybdb0r16r84q12j2bpciyj9jqvzpw091m6"))))
(build-system cmake-build-system)
(arguments
'(#:tests? #f ; no tests
@@ -136,16 +136,14 @@ HTML/CSS applications to full-fledged web browsers.")
(define-public webkitgtk-2.4
(package (inherit webkitgtk)
(name "webkitgtk")
- (version "2.4.9")
+ (version "2.4.10")
(source (origin
(method url-fetch)
(uri (string-append "http://www.webkitgtk.org/releases/"
name "-" version ".tar.xz"))
(sha256
(base32
- "0r651ar3p0f8zwl7764kyimxk5hy88cwy116pv8cl5l8hbkjkpxg"))
- (patches
- (list (search-patch "webkitgtk-2.4-sql-init-string.patch")))))
+ "0566yx5lxi40g0wpvmwbc8y76akd7zph7flrjdp2vv3z1nra9z9k"))))
(build-system gnu-build-system)
(arguments
'(#:tests? #f ; no tests
diff --git a/gnu/packages/wicd.scm b/gnu/packages/wicd.scm
index cad078e061..350baf7373 100644
--- a/gnu/packages/wicd.scm
+++ b/gnu/packages/wicd.scm
@@ -2,6 +2,7 @@
;;; Copyright © 2015 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2015 Pierre-Antoine Rault <par@rigelk.eu>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
+;;; Copyright © 2016 Ludovic Courtès <ludo@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -36,7 +37,7 @@
(define-public wicd
(package
(name "wicd")
- (version "1.7.3")
+ (version "1.7.4")
(source
(origin
(method url-fetch)
@@ -44,12 +45,12 @@
(version-major+minor version) "/" version
"/+download/wicd-" version ".tar.gz"))
(sha256
- (base32 "00c4rq753bhg64rv1v9yl834ssq7igyy7cz3swp287b5n5bqiqwi"))
+ (base32 "0qpbwwsrqdp40mm3a8djpn2d055rxxspdhwijwsdnws700a9d637"))
(patches (map search-patch
'("wicd-bitrate-none-fix.patch"
"wicd-get-selected-profile-fix.patch"
"wicd-urwid-1.3.patch"
- "wicd-template-instantiation.patch")))))
+ "wicd-wpa2-ttls.patch")))))
(build-system python-build-system)
(native-inputs `(("gettext" ,gnu-gettext)))
(inputs `(("dbus-glib" ,dbus-glib)
diff --git a/gnu/packages/wm.scm b/gnu/packages/wm.scm
index 53259dcb29..a63e597599 100644
--- a/gnu/packages/wm.scm
+++ b/gnu/packages/wm.scm
@@ -5,6 +5,7 @@
;;; Copyright © 2015 xd1le <elisp.vim@gmail.com>
;;; Copyright © 2015 Paul van der Walt <paul@denknerd.org>
;;; Copyright © 2016 Danny Milosavljevic <dannym@scratchpost.org>
+;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -144,14 +145,14 @@ commands would.")
(define-public i3-wm
(package
(name "i3-wm")
- (version "4.10.3")
+ (version "4.12")
(source (origin
(method url-fetch)
(uri (string-append "http://i3wm.org/downloads/i3-"
version ".tar.bz2"))
(sha256
(base32
- "1lq7h4w7m0hi31iva8g7yf1sc11ispnknxjdaj9agld4smxqb44j"))))
+ "1d3q3lgpjbkmcwzjhp0dfr0jq847silcfg087slcnj95ikh1r7p1"))))
(build-system gnu-build-system)
(arguments
`(#:make-flags (list "CC=gcc" (string-append "PREFIX=" %output))
diff --git a/gnu/packages/xiph.scm b/gnu/packages/xiph.scm
index 04dfd70c5a..1e157a4c96 100644
--- a/gnu/packages/xiph.scm
+++ b/gnu/packages/xiph.scm
@@ -378,7 +378,7 @@ windows systems.")
(define-public icecast
(package
(name "icecast")
- (version "2.4.1")
+ (version "2.4.3")
(source (origin
(method url-fetch)
(uri (string-append
@@ -386,7 +386,7 @@ windows systems.")
version ".tar.gz"))
(sha256
(base32
- "0js5lylrgklhvvaksx46zc8lc975qb1bns8h1ms545nv071rxy23"))))
+ "14n5vm2xnyn8y7kl46lnnlgv6v5fjykhc57ffdsh0qaxfs6a8p68"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))