diff options
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 28a0da80e8..743e8fdce9 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -8171,3 +8171,34 @@ unmodeled, or latent sources of noise.") data (variant call format, e.g. VCF or BCF) or meta-analysis results in R.") ;; Any version of the GPL is acceptable (license (list license:gpl2+ license:gpl3+)))) + +(define-public r-raremetals2 + (package + (name "r-raremetals2") + (version "0.1") + (source + (origin + (method url-fetch) + (uri (string-append "http://genome.sph.umich.edu/w/images/" + "b/b7/RareMETALS2_" version ".tar.gz")) + (sha256 + (base32 + "0z5ljcgvnm06ja9lm85a3cniq7slxcy37aqqkxrdidr79an5fs4s")))) + (properties `((upstream-name . "RareMETALS2"))) + (build-system r-build-system) + (propagated-inputs + `(("r-seqminer" ,r-seqminer) + ("r-mvtnorm" ,r-mvtnorm) + ("r-compquadform" ,r-compquadform) + ("r-getopt" ,r-getopt))) + (home-page "http://genome.sph.umich.edu/wiki/RareMETALS2") + (synopsis "Analyze gene-level association tests for binary trait") + (description + "The R package rareMETALS2 is an extension of the R package rareMETALS. +It was designed to meta-analyze gene-level association tests for binary trait. +While rareMETALS offers a near-complete solution for meta-analysis of +gene-level tests for quantitative trait, it does not offer the optimal +solution for binary trait. The package rareMETALS2 offers improved features +for analyzing gene-level association tests in meta-analyses for binary +trait.") + (license license:gpl3))) |