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-rw-r--r--gnu/packages/statistics.scm91
1 files changed, 57 insertions, 34 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 7b3483206f..43f9042e9c 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -5,6 +5,7 @@
;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Pjotr Prins <pjotr.guix@thebird.nl>
;;; Copyright © 2016 Roel Janssen <roel@gnu.org>
+;;; Copyright © 2016 Ben Woodcroft <donttrustben@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -356,13 +357,13 @@ Munsell colour system.")
(define-public r-rcpp
(package
(name "r-rcpp")
- (version "0.12.4")
+ (version "0.12.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "Rcpp" version))
(sha256
- (base32 "1lyhyaxrnb5w4igi3l1p378s4jblcnrv6h7h5ym42ljm54mm44w3"))))
+ (base32 "1vw0zbd6zhqixqg7h8ahn1dr1hb492365x419nrp2lhvr60r8i0k"))))
(build-system r-build-system)
(home-page "http://www.rcpp.org")
(synopsis "Seamless R and C++ Integration")
@@ -604,13 +605,13 @@ evaluation (NSE) in R.")
(define-public r-dbi
(package
(name "r-dbi")
- (version "0.3.1")
+ (version "0.4-1")
(source (origin
(method url-fetch)
(uri (cran-uri "DBI" version))
(sha256
(base32
- "0xj5baxwnhl23rd5nskhjvranrwrc68f3xlyrklglipi41bm69hw"))))
+ "13n6ibmrma42qmq17qgkyjsc0ciwqf17sd7lw7w26pwpyjd4mwgg"))))
(build-system r-build-system)
(home-page "https://github.com/rstats-db/DBI")
(synopsis "R database interface")
@@ -624,13 +625,13 @@ R/DBMS implementations.")
(define-public r-bh
(package
(name "r-bh")
- (version "1.60.0-1")
+ (version "1.60.0-2")
(source (origin
(method url-fetch)
(uri (cran-uri "BH" version))
(sha256
(base32
- "08gc3b0irgvpjl59irdxs8jhlbky4yp4fvs3zi4pq0wdwj43cfsk"))))
+ "136497fng9bcvrf8favpj8inz96pxdwp1rrb2k00sxjxjbgawhg4"))))
(build-system r-build-system)
(home-page "https://github.com/eddelbuettel/bh")
(synopsis "R package providing subset of Boost headers")
@@ -642,13 +643,13 @@ for template use among CRAN packages.")
(define-public r-evaluate
(package
(name "r-evaluate")
- (version "0.8.3")
+ (version "0.9")
(source (origin
(method url-fetch)
(uri (cran-uri "evaluate" version))
(sha256
(base32
- "08d6164m9wqf9qq6yh1s9a0qxwqzqpsq7312hilzy79gxf9gixzr"))))
+ "1bn6bympg9prr8d16g1g530bddii8i04hf4i2bkw0yf4dsfqq4g8"))))
(build-system r-build-system)
(propagated-inputs
`(("r-stringr" ,r-stringr)))
@@ -664,13 +665,13 @@ adapted for other output formats, such as HTML or LaTeX.")
(define-public r-formatr
(package
(name "r-formatr")
- (version "1.3")
+ (version "1.4")
(source (origin
(method url-fetch)
(uri (cran-uri "formatR" version))
(sha256
(base32
- "09fsd0z6nhksc1h921h8q28f87hr6d1q8d6dmpxphjylb9r5xmj4"))))
+ "1fvynq0fj1r9grg9vvfdh5fl2riv6qki9f2rfpyvbvqq3xxpmi3f"))))
(build-system r-build-system)
(home-page "http://yihui.name/formatR")
(synopsis "Format R code automatically")
@@ -684,13 +685,13 @@ There is also a Shiny app as a user interface in this package.")
(define-public r-highr
(package
(name "r-highr")
- (version "0.5.1")
+ (version "0.6")
(source (origin
(method url-fetch)
(uri (cran-uri "highr" version))
(sha256
(base32
- "11hyawzhaw3ph5y5xphi7alx6df1d0i6wh0a2n5m4sxxhdrzswnb"))))
+ "0n9v44dxdy5fhkdmpbpa2p78whyd9z3rhhy42ipdz5m5vsr55qa3"))))
(build-system r-build-system)
(home-page "https://github.com/yihui/highr")
(synopsis "Syntax highlighting for R source code")
@@ -765,13 +766,13 @@ emitter (http://pyyaml.org/wiki/LibYAML) for R.")
(define-public r-knitr
(package
(name "r-knitr")
- (version "1.12.3")
+ (version "1.13")
(source (origin
(method url-fetch)
(uri (cran-uri "knitr" version))
(sha256
(base32
- "1v3rzv6wq8mvpdrljsaqk4z3f8323jnv385js24wmn4fglqly6dz"))))
+ "0v69846myi4fbjp8wiik4295fhba67s3i6ccysghm6x031i2f26q"))))
(build-system r-build-system)
(propagated-inputs
`(("r-evaluate" ,r-evaluate)
@@ -915,13 +916,13 @@ R packages that praise their users.")
(define-public r-testthat
(package
(name "r-testthat")
- (version "1.0.0")
+ (version "1.0.2")
(source (origin
(method url-fetch)
(uri (cran-uri "testthat" version))
(sha256
(base32
- "1ci1y54kaz7g4di79fcibp0m0wkkxn2glchhs6v8jfg6374ka410"))))
+ "0pj1r01x4ny4capr83dfa19hi5i2sjjxky99schzip8zrq5dzxqf"))))
(build-system r-build-system)
(propagated-inputs
`(("r-digest" ,r-digest)
@@ -1395,14 +1396,14 @@ collation, and NAMESPACE files.")
(define-public r-openssl
(package
(name "r-openssl")
- (version "0.9.2")
+ (version "0.9.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "openssl" version))
(sha256
(base32
- "1dbsaciz39zvsmcyxkmpfm5yxzrpw2iv2nb86525wn80q0cyv0cb"))))
+ "0ldqam7d9fyxwhr651ld6lsh05lg4v2y8ajxwzq9ywzjmfb3vlpz"))))
(build-system r-build-system)
(inputs
`(("openssl" ,openssl)))
@@ -1452,13 +1453,13 @@ functions make it easy to control additional request components.")
(define-public r-git2r
(package
(name "r-git2r")
- (version "0.14.0")
+ (version "0.15.0")
(source (origin
(method url-fetch)
(uri (cran-uri "git2r" version))
(sha256
(base32
- "0jkkrggffpflaaw0gn2hnm1wz83xs31amriim481g73zf30g2bpr"))))
+ "1rpdf85wy9fp456ypvbhl3p9whkb7kgl0n7rkqxd2bhvyzkvjak8"))))
(build-system r-build-system)
;; This R package contains modified sources of libgit2. This modified
;; version of libgit2 is built as the package is built. Hence libgit2 is
@@ -1496,13 +1497,13 @@ informative error messages when it's not available.")
(define-public r-devtools
(package
(name "r-devtools")
- (version "1.11.0")
+ (version "1.11.1")
(source (origin
(method url-fetch)
(uri (cran-uri "devtools" version))
(sha256
(base32
- "101j15d0f9107pnmdpdwqyvk2ncykq48336rl8lnqp6idiq8id2q"))))
+ "0ik3l3q62sspdph613f9ik5yz36s8q5nrc50dqgn3pxzvpwpdj2i"))))
(build-system r-build-system)
(propagated-inputs
`(("r-curl" ,r-curl)
@@ -1567,13 +1568,13 @@ disk (or a connection).")
(define-public r-plotrix
(package
(name "r-plotrix")
- (version "3.6-1")
+ (version "3.6-2")
(source (origin
(method url-fetch)
(uri (cran-uri "plotrix" version))
(sha256
(base32
- "1y8xnlpy4zba70af9lwj2sshvfdfcmfdh92wamyzj8z9gciailfr"))))
+ "1jn1k3skmlgyvpijj6vlcn5m2zgrsdh00g1fq8n5dqs1pkl1sqrw"))))
(build-system r-build-system)
(home-page "http://cran.r-project.org/web/packages/plotrix")
(synopsis "Various plotting functions")
@@ -1646,13 +1647,13 @@ well as additional utilities such as panel and axis annotation functions.")
(define-public r-rcpparmadillo
(package
(name "r-rcpparmadillo")
- (version "0.6.700.3.0")
+ (version "0.6.700.6.0")
(source (origin
(method url-fetch)
(uri (cran-uri "RcppArmadillo" version))
(sha256
(base32
- "1mc62b6my568ni18w4clgs6l6ggqrwzsm3lgx0c1prf4rap69s8w"))
+ "0x736cjg1pbvn8c6h91c88qmmz4pddvvqg88k9c9kwhn24fjrra0"))
(modules '((guix build utils)))
;; Remove bundled armadillo sources
(snippet
@@ -1730,14 +1731,14 @@ encoder/decoder, round-off-error-free sum and cumsum, etc.")
(define-public r-rmarkdown
(package
(name "r-rmarkdown")
- (version "0.9.5")
+ (version "0.9.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "rmarkdown" version))
(sha256
(base32
- "1zz98jxvw3lzva5kkj1n37gbhjwqd96gjs04y6h37pqy6qmkhk8c"))))
+ "09ajq5miqzz46q0i9svvbh93dbi7xbjn4702d6z3scdz272gx7l2"))))
(properties `((upstream-name . "rmarkdown")))
(build-system r-build-system)
(propagated-inputs
@@ -2411,13 +2412,13 @@ persistent (on the file system).")
(define-public r-r-rsp
(package
(name "r-r-rsp")
- (version "0.21.0")
+ (version "0.30.0")
(source (origin
(method url-fetch)
(uri (cran-uri "R.rsp" version))
(sha256
(base32
- "0snc6ps75s3ci6sy8mil1wg2i9xmlr1ygh9n244y1brdvp43dfsw"))))
+ "1ssykygqkxzx9qblxhavxlf2z6r5bhk0s47yw1dllfiyc8zy7jv2"))))
(properties `((upstream-name . "R.rsp")))
(build-system r-build-system)
(propagated-inputs
@@ -2461,13 +2462,13 @@ t-probabilities, quantiles, random deviates and densities.")
(define-public r-matrixstats
(package
(name "r-matrixstats")
- (version "0.50.1")
+ (version "0.50.2")
(source (origin
(method url-fetch)
(uri (cran-uri "matrixStats" version))
(sha256
(base32
- "08l32abp7dfnsc49ca4hzznh934y60n5z01x5ga2ixky5961s57c"))))
+ "0zj27xxx9cyrq16rn4g3l0krqg68p8f2qp18w1w4i767j87amlbj"))))
(properties `((upstream-name . "matrixStats")))
(build-system r-build-system)
(native-inputs
@@ -2563,13 +2564,13 @@ It uses and relies on grid graphics and formal (S4) classes and methods.")
(define-public r-plotly
(package
(name "r-plotly")
- (version "3.4.13")
+ (version "3.6.0")
(source (origin
(method url-fetch)
(uri (cran-uri "plotly" version))
(sha256
(base32
- "1pfl9w35iwin8a1hfwcihajyps2ngjbyrmvi61b9lspcdbk39lf8"))))
+ "15hvqa0sf4z6l6vvr614zjszfphwpv66zpc665iyiynq0pd1jv2c"))))
(build-system r-build-system)
(propagated-inputs
`(("r-base64enc" ,r-base64enc)
@@ -2593,6 +2594,28 @@ directly from R. Once uploaded to a plotly account, plotly graphs (and the
data behind them) can be viewed and modified in a web browser.")
(license license:x11)))
+(define-public r-biased-urn
+ (package
+ (name "r-biased-urn")
+ (version "1.07")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "BiasedUrn" version))
+ (sha256
+ (base32
+ "13i2lgfnjhlbbm2yxfc2l5hswqw6x03pwba5csjmirv8kpjw4xr3"))))
+ (properties `((upstream-name . "BiasedUrn")))
+ (build-system r-build-system)
+ (home-page "http://www.agner.org/random/")
+ (synopsis "Biased urn model distributions")
+ (description
+ "This package provides statistical models of biased sampling in the form
+of univariate and multivariate noncentral hypergeometric distributions,
+including Wallenius' noncentral hypergeometric distribution and Fisher's
+noncentral hypergeometric distribution (also called extended hypergeometric
+distribution).")
+ (license license:gpl3+)))
(define-public r-ztable
(package
generated by cgit v1.2.3 (git 2.45.0) at 2024-12-16 08:36:13 +0000