diff options
Diffstat (limited to 'gnu/packages/statistics.scm')
| -rw-r--r-- | gnu/packages/statistics.scm | 87 |
1 files changed, 44 insertions, 43 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index cc9fa69a32..06f0aa1e75 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -66,6 +66,7 @@ #:use-module (gnu packages python) #:use-module (gnu packages python-xyz) #:use-module (gnu packages readline) + #:use-module (gnu packages sphinx) #:use-module (gnu packages ssh) #:use-module (gnu packages tcl) #:use-module (gnu packages tex) @@ -459,16 +460,16 @@ k-nearest neighbour, Learning Vector Quantization and Self-Organizing Maps.") (define-public r-cluster (package (name "r-cluster") - (version "2.0.8") + (version "2.0.9") (source (origin (method url-fetch) (uri (cran-uri "cluster" version)) (sha256 (base32 - "0jkmlhjknndh0lmyvqz7s7j1hhnarixm6zb39np4ssw47flk0nfc")))) + "1bg5dvs4bzj0rp75jpxaklz12rvyh5w99h7zkvfgpgn86ljg1rlf")))) (build-system r-build-system) - (inputs + (native-inputs `(("gfortran" ,gfortran))) (home-page "https://cran.r-project.org/web/packages/cluster") (synopsis "Methods for cluster analysis") @@ -586,14 +587,14 @@ and operations on them using LAPACK and SuiteSparse.") (define-public r-nlme (package (name "r-nlme") - (version "3.1-139") + (version "3.1-140") (source (origin (method url-fetch) (uri (cran-uri "nlme" version)) (sha256 (base32 - "0fap121c18nbznyzvnqvsdiszg2nbmkas6zhgrz1f8jiv1lzqq04")))) + "0k9x5j34fx093a023da9ny3b3101lbwpmfm27mkvfj950l22z88x")))) (build-system r-build-system) (propagated-inputs `(("r-lattice" ,r-lattice))) @@ -802,13 +803,13 @@ effects of different types of color-blindness.") (define-public r-digest (package (name "r-digest") - (version "0.6.18") + (version "0.6.19") (source (origin (method url-fetch) (uri (cran-uri "digest" version)) (sha256 - (base32 "0k3iv0r8wy8w7zchmgrnrqv3bc149075j4817kf0q521vi4f6vbj")))) + (base32 "1x6cbj9qvkk7pxv9xdqibazw3x8psjp6x0m0ildx1jwyb2ymkl98")))) (build-system r-build-system) ;; Vignettes require r-knitr, which requires r-digest, so we have to ;; disable them and the tests. @@ -1225,19 +1226,19 @@ and to generate base64 encoded string from raster matrix.") (define-public r-svglite (package (name "r-svglite") - (version "1.2.1") + (version "1.2.2") (source (origin (method url-fetch) (uri (cran-uri "svglite" version)) (sha256 (base32 - "1bws3lc4hlhln11zd7lalhiyc43yk6c6vrzy41fkxk1dkjazfx51")))) + "1gwv51wqp6pgm2f9gavsiq65njs77fr49n8y6y9ax60k3a4vvg14")))) (build-system r-build-system) - (native-inputs `(("r-rcpp" ,r-rcpp))) (propagated-inputs `(("r-bh" ,r-bh) - ("r-gdtools" ,r-gdtools))) + ("r-gdtools" ,r-gdtools) + ("r-rcpp" ,r-rcpp))) (home-page "https://github.com/hadley/svglite") (synopsis "SVG graphics device") (description @@ -1447,13 +1448,13 @@ emitter (http://pyyaml.org/wiki/LibYAML) for R.") (define-public r-knitr (package (name "r-knitr") - (version "1.22") + (version "1.23") (source (origin (method url-fetch) (uri (cran-uri "knitr" version)) (sha256 (base32 - "1iks80g1cj25rvgyf0y2jc2pmfvsq4sbgdp788w9016bk71wzdcs")))) + "16ba4258c915xydhniw4cw7fvv1vp4cnwd1w49ykx7zw00rznfq6")))) (build-system r-build-system) (propagated-inputs `(("r-evaluate" ,r-evaluate) @@ -1695,13 +1696,13 @@ and printing capabilities than traditional data frames.") (define-public r-dplyr (package (name "r-dplyr") - (version "0.8.0.1") + (version "0.8.1") (source (origin (method url-fetch) (uri (cran-uri "dplyr" version)) (sha256 (base32 - "0p6dbjrgqyklc67g53v1a5xdp9x2jpcsdcs6v3djf9d366fqh244")))) + "1nw12hzk1jcac5879nfmf1yp98jpb3i59qkb8sfpk2cd6zqgfgjz")))) (build-system r-build-system) (propagated-inputs `(("r-assertthat" ,r-assertthat) @@ -2072,13 +2073,13 @@ jackknifed confidence intervals are available for most estimates.") (define-public r-rversions (package (name "r-rversions") - (version "1.1.0") + (version "2.0.0") (source (origin (method url-fetch) (uri (cran-uri "rversions" version)) (sha256 (base32 - "0g4wvq6m9inhy6ww18lvkhkgarb1m9dp2kdxkkyk5qvldgqa598l")))) + "0mkg9zrjxlbwqzijiysivrs523x48syqj30xdfp88clpkqfk435m")))) (build-system r-build-system) (propagated-inputs `(("r-curl" ,r-curl) @@ -2135,14 +2136,14 @@ R version.") (define-public r-checkmate (package (name "r-checkmate") - (version "1.9.1") + (version "1.9.3") (source (origin (method url-fetch) (uri (cran-uri "checkmate" version)) (sha256 (base32 - "1y4ylzn55kpyfpzcx9rxb9413d3ck6hair36ldl0ak61ia5kc75p")))) + "15ccwvmw73c2zz1k10k5zdn8px0rrbnvs1b4nzvlb0iwj7cimhp4")))) (build-system r-build-system) (propagated-inputs `(("r-backports" ,r-backports))) @@ -2201,14 +2202,14 @@ or source files in a key-value fashion.") (define-public r-batchjobs (package (name "r-batchjobs") - (version "1.7") + (version "1.8") (source (origin (method url-fetch) (uri (cran-uri "BatchJobs" version)) (sha256 (base32 - "035658marnw57p4f38g99rwmvmb6hpbq0fhlxp3qbw22zfnnkvs9")))) + "1zz4sspj596pijxlz321g0jy2rg9ki83j6fihbwisjwr66p2vk1m")))) (properties `((upstream-name . "BatchJobs"))) (build-system r-build-system) (propagated-inputs @@ -2596,13 +2597,13 @@ well as additional utilities such as panel and axis annotation functions.") (define-public r-rcpparmadillo (package (name "r-rcpparmadillo") - (version "0.9.400.2.0") + (version "0.9.400.3.0") (source (origin (method url-fetch) (uri (cran-uri "RcppArmadillo" version)) (sha256 (base32 - "01bf8jdlzndmqqzw16lpwx7zz1hkykd001dxxd9rzrgmn86f2xvs")))) + "1c0kmp54xgg67hxpqm8bibcxmmwljbdvm9p1d9wzirp83x86v4sn")))) (properties `((upstream-name . "RcppArmadillo"))) (build-system r-build-system) ;; All needed for vignettes @@ -3003,14 +3004,14 @@ statements.") (define-public r-segmented (package (name "r-segmented") - (version "0.5-3.0") + (version "0.5-4.0") (source (origin (method url-fetch) (uri (cran-uri "segmented" version)) (sha256 (base32 - "0nrik5fyq59hwiwjcpbi4p5yfavgfjq6wyrynhkrbm4k6v1g1wlq")))) + "0wa0xjda2j33284jkp5hj1wdjysc5f4paj1s1lcixgawj4ckmxkz")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/segmented") (synopsis "Regression models with breakpoints estimation") @@ -3161,13 +3162,13 @@ using the multicore functionality of the parallel package.") (define-public r-dt (package (name "r-dt") - (version "0.5") + (version "0.6") (source (origin (method url-fetch) (uri (cran-uri "DT" version)) (sha256 (base32 - "1s5d3sld4l8zygpkvprvlbqa0pm2cv1bm7h7p999wxlap28vnnqf")))) + "05kr88yshq6siarp5q7aapvsr63vx3p0aqablwgifn8m2sfqxmif")))) (properties `((upstream-name . "DT"))) (build-system r-build-system) @@ -3237,14 +3238,14 @@ analysis of large sparse or dense matrices.") (define-public r-glmnet (package (name "r-glmnet") - (version "2.0-16") + (version "2.0-18") (source (origin (method url-fetch) (uri (cran-uri "glmnet" version)) (sha256 (base32 - "1brr51z1fzbpyj6myyir4g6dhbp6xwl7nx4xnvrjarnf5y0csk55")))) + "0sr5akaiaab1sdh9c8gfmc4kp9b4vqhd90d9ig0rqpqhp3bykp78")))) (build-system r-build-system) (inputs `(("gfortran" ,gfortran))) @@ -3776,14 +3777,14 @@ and tidyr provides no margins or aggregation.") (define-public r-hexbin (package (name "r-hexbin") - (version "1.27.2") + (version "1.27.3") (source (origin (method url-fetch) (uri (cran-uri "hexbin" version)) (sha256 (base32 - "0lpfl0015lg5x7lvv9dr302bca22c7fs91pnd896ypgpzqg7pm26")))) + "14f181lw6sj5xhfxbrpyyinsjfl0nzqilq6z80lgrhj2cnkj593y")))) (build-system r-build-system) (propagated-inputs `(("r-lattice" ,r-lattice))) @@ -4108,14 +4109,14 @@ hierarchical clustering dendrograms.") (define-public r-preprocesscore (package (name "r-preprocesscore") - (version "1.44.0") + (version "1.46.0") (source (origin (method url-fetch) (uri (bioconductor-uri "preprocessCore" version)) (sha256 (base32 - "0ijyjqi8mxxf350dhvgp36swwww5ag7ac9a6r6ymihc5syjr4w4j")))) + "0iiyn42hlvmc5vabg5x15mls11124i23sh4qijwk0narh438cqm0")))) (properties `((upstream-name . "preprocessCore"))) (build-system r-build-system) @@ -4154,14 +4155,14 @@ existing packages provide.") (define-public r-sfsmisc (package (name "r-sfsmisc") - (version "1.1-3") + (version "1.1-4") (source (origin (method url-fetch) (uri (cran-uri "sfsmisc" version)) (sha256 (base32 - "1y25nnw09qfm66523w1z4q766lv15a6ykvsq30r154n7m7aggvsq")))) + "0zaw617zarmwir8l60riky0z6r1j3mwfnm1f32vqcbljb74akdj4")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/sfsmisc") (synopsis "Utilities from \"Seminar fuer Statistik\" ETH Zurich") @@ -4443,13 +4444,13 @@ data at that region, and avoids over-plotting.") (define-public r-ggthemes (package (name "r-ggthemes") - (version "4.1.1") + (version "4.2.0") (source (origin (method url-fetch) (uri (cran-uri "ggthemes" version)) (sha256 (base32 - "092hks6bxi6al8nclgswnzfmx5wp6n3qf63aqiajca7dx8w8n0m2")))) + "0rrkzfggc1nlda1w1lbqdycx6nawxbkac1szhvkwrqlzh6agxcsv")))) (build-system r-build-system) (propagated-inputs `(("r-ggplot2" ,r-ggplot2) @@ -4817,14 +4818,14 @@ can be efficiently implemented directly in the R language.") (define-public r-robustbase (package (name "r-robustbase") - (version "0.93-4") + (version "0.93-5") (source (origin (method url-fetch) (uri (cran-uri "robustbase" version)) (sha256 (base32 - "1q56y0iqp7qhavm4xnpzhs64q7l893y7yiq3b20fllpghka077pa")))) + "0mkzbsjl5nihyj7mzks14p6kr3spp44xvygjz4ran11gspdn9rdx")))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran))) @@ -4833,7 +4834,7 @@ can be efficiently implemented directly in the R language.") (home-page "http://robustbase.r-forge.r-project.org/") (synopsis "Basic robust statistics") (description - "This packages allows to analyze data with robust methods such as + "This package allows to analyze data with robust methods such as regression methodology including model selections and multivariate statistics.") (license license:gpl2+))) @@ -5396,14 +5397,14 @@ first and second order derivatives.") (define-public r-sn (package (name "r-sn") - (version "1.5-3") + (version "1.5-4") (source (origin (method url-fetch) (uri (cran-uri "sn" version)) (sha256 (base32 - "10via4lg0vx9pzq350vwhz5wv1dhzxr2l3r6jq99nk37vmyvj8fc")))) + "0x46gxkplxbnhaqbpiav1r4xlv4ib7n57kxmca7scqwj22y7wrs6")))) (build-system r-build-system) (propagated-inputs `(("r-mnormt" ,r-mnormt) @@ -5411,7 +5412,7 @@ first and second order derivatives.") (home-page "http://azzalini.stat.unipd.it/SN") (synopsis "The skew-normal and skew-t distributions") (description - "This packages provides functionalities to build and manipulate + "This package provides functionalities to build and manipulate probability distributions of the skew-normal family and some related ones, notably the skew-t family, and provides related statistical methods for data fitting and diagnostics, in the univariate and the |