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-rw-r--r--gnu/packages/python-xyz.scm299
1 files changed, 261 insertions, 38 deletions
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 660e5e40a9..e3e2b5f0d7 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -29,7 +29,7 @@
;;; Copyright © 2016, 2017, 2018, 2019 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2016, 2017 Stefan Reichör <stefan@xsteve.at>
;;; Copyright © 2016 Dylan Jeffers <sapientech@sapientech@openmailbox.org>
-;;; Copyright © 2016, 2017 Alex Vong <alexvong1995@gmail.com>
+;;; Copyright © 2016, 2017, 2019 Alex Vong <alexvong1995@gmail.com>
;;; Copyright © 2016, 2017, 2018 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2016, 2017, 2018 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2016, 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
@@ -60,6 +60,7 @@
;;; Copyright © 2019 Brett Gilio <brettg@posteo.net>
;;; Copyright © 2019 Sam <smbaines8@gmail.com>
;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us>
+;;; Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -88,6 +89,7 @@
#:use-module (gnu packages compression)
#:use-module (gnu packages crypto)
#:use-module (gnu packages databases)
+ #:use-module (gnu packages dbm)
#:use-module (gnu packages file)
#:use-module (gnu packages fontutils)
#:use-module (gnu packages gcc)
@@ -118,6 +120,7 @@
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages python-check)
+ #:use-module (gnu packages python-compression)
#:use-module (gnu packages python-crypto)
#:use-module (gnu packages python-web)
#:use-module (gnu packages qt)
@@ -2692,7 +2695,7 @@ ecosystem, but can naturally be used also by other projects.")
(define-public python-robotframework
(package
(name "python-robotframework")
- (version "3.1.1")
+ (version "3.1.2")
;; There are no tests in the PyPI archive.
(source
(origin
@@ -2702,8 +2705,7 @@ ecosystem, but can naturally be used also by other projects.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32
- "1aaiamc9l35m5sf7xl2qc5q9308v7sz3p1qgzcslsjxzddphyn4v"))
+ (base32 "16gnxy0qinh8fhs0qvhff5z2xh49c3cqgm0d7bfjw120df6x7fym"))
(patches (search-patches
"python-robotframework-honor-source-date-epoch.patch"))))
(build-system python-build-system)
@@ -4863,17 +4865,101 @@ them as the version argument or in a SCM managed file.")
(define-public python2-setuptools-scm
(package-with-python2 python-setuptools-scm))
+(define-public python-pathlib2
+ (package
+ (name "python-pathlib2")
+ (version "2.3.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "pathlib2" version))
+ (sha256
+ (base32
+ "0hpp92vqqgcd8h92msm9slv161b1q160igjwnkf2ag6cx0c96695"))))
+ (build-system python-build-system)
+ (propagated-inputs
+ `(("python-scandir" ,python-scandir)
+ ("python-six" ,python-six)))
+ (home-page "https://pypi.python.org/pypi/pathlib2/")
+ (synopsis "Object-oriented filesystem paths")
+ (description "The goal of pathlib2 is to provide a backport of the
+standard @code{pathlib} module which tracks the standard library module, so
+all the newest features of the standard @code{pathlib} can be used also on
+older Python versions.")
+ (license license:expat)))
+
+(define-public python-importlib-metadata
+ (package
+ (name "python-importlib-metadata")
+ (version "0.18")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "importlib_metadata" version))
+ (sha256
+ (base32
+ "1nqj6vj2z4byi8flzf2lbldhqgicsz9mkpv4k69kjd8p8qxy4vnb"))))
+ (build-system python-build-system)
+ (propagated-inputs
+ `(("python-configparser" ,python-configparser)
+ ("python-contextlib2" ,python-contextlib2)
+ ("python-docutils" ,python-docutils)
+ ("python-pathlib2" ,python-pathlib2)
+ ("python-rst.linker" ,python-rst.linker)
+ ("python-zipp" ,python-zipp)))
+ (native-inputs
+ `(("python-setuptools-scm" ,python-setuptools-scm)
+ ("python-sphinx" ,python-sphinx)))
+ (home-page "https://importlib-metadata.readthedocs.io/")
+ (synopsis "Read metadata from Python packages")
+ (description
+ "@code{importlib_metadata} is a library which provides an API for
+accessing an installed Python package's metadata, such as its entry points or
+its top-level name. This functionality intends to replace most uses of
+@code{pkg_resources} entry point API and metadata API. Along with
+@code{importlib.resources} in Python 3.7 and newer, this can eliminate the
+need to use the older and less efficient @code{pkg_resources} package.")
+ (license license:asl2.0)))
+
+(define-public python-jaraco-packaging
+ (package
+ (name "python-jaraco-packaging")
+ (version "6.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "jaraco.packaging" version))
+ (sha256
+ (base32
+ "0zimrnkh33b9g8ffw11mjh6kvs54cy5gcjw1h5cl1r7dc833dmkm"))))
+ (build-system python-build-system)
+ (propagated-inputs
+ `(("python-pytest" ,python-pytest)
+ ("python-pytest-checkdocs" ,python-pytest-checkdocs)
+ ("python-pytest-flake8" ,python-pytest-flake8)
+ ("python-rst.linker" ,python-rst.linker)
+ ("python-setuptools" ,python-setuptools)
+ ("python-setuptools-scm" ,python-setuptools-scm)
+ ("python-six" ,python-six)
+ ("python-sphinx" ,python-sphinx)))
+ (home-page "https://github.com/jaraco/jaraco.packaging")
+ (synopsis "Tools to supplement packaging Python releases")
+ (description
+ "This package provides various tools to supplement packaging Python
+releases.")
+ (license license:expat)))
+
(define-public python-pathpy
(package
(name "python-pathpy")
- (version "11.0.1")
+ (version "11.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "path.py" version))
(sha256
- (base32 "07x15v8c7ry9bvycw294c9yq6ky9v2b0dalvgi6rn38ilh69vsz7"))))
- ;; (outputs '("out" "doc"))
+ (base32 "1jxkf91syzxlpiwgm83fjfz1m5xh3jrvv4iyl5wjsnkk599pls5n"))))
+ (outputs '("out" "doc"))
(build-system python-build-system)
(propagated-inputs
`(("python-appdirs" ,python-appdirs)))
@@ -4882,26 +4968,31 @@ them as the version argument or in a SCM managed file.")
("python-sphinx" ,python-sphinx)
("python-rst.linker" ,python-rst.linker)
("python-pytest" ,python-pytest)
- ("python-pytest-runner" ,python-pytest-runner)))
+ ("python-pytest-runner" ,python-pytest-runner)
+ ("python-jaraco-packaging" ,python-jaraco-packaging)))
(arguments
- ;; FIXME: Documentation and tests require "jaraco.packaging".
- `(#:tests? #f))
- ;; #:phases
- ;; (modify-phases %standard-phases
- ;; (add-after 'build 'build-doc
- ;; (lambda _
- ;; (setenv "LANG" "en_US.UTF-8")
- ;; (zero? (system* "python" "setup.py" "build_sphinx"))))
- ;; (add-after 'install 'install-doc
- ;; (lambda* (#:key outputs #:allow-other-keys)
- ;; (let* ((data (string-append (assoc-ref outputs "doc") "/share"))
- ;; (doc (string-append data "/doc/" ,name "-" ,version))
- ;; (html (string-append doc "/html")))
- ;; (mkdir-p html)
- ;; (for-each (lambda (file)
- ;; (copy-file file (string-append doc "/" file)))
- ;; '("README.rst" "CHANGES.rst"))
- ;; (copy-recursively "build/sphinx/html" html)))))))
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'build 'build-doc
+ (lambda _
+ (setenv "LANG" "en_US.UTF-8")
+ (invoke "python" "setup.py" "build_sphinx")))
+ (add-after 'install 'install-doc
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((data (string-append (assoc-ref outputs "doc") "/share"))
+ (doc (string-append data "/doc/" ,name "-" ,version))
+ (html (string-append doc "/html")))
+ (mkdir-p html)
+ (for-each (lambda (file)
+ (copy-file file (string-append doc "/" file)))
+ '("README.rst" "CHANGES.rst"))
+ (copy-recursively "build/sphinx/html" html)
+ #t)))
+ (replace 'check
+ (lambda _
+ ;; The import time test aborts if an import takes longer than
+ ;; 100ms. It may very well take a little longer than that.
+ (invoke "pytest" "-v" "-k" "not test_import_time"))))))
(home-page "https://github.com/jaraco/path.py")
(synopsis "Python module wrapper for built-in os.path")
(description
@@ -7898,6 +7989,27 @@ be set via config files and/or environment variables.")
@code{ArgumentParser} object.")
(license license:asl2.0)))
+(define-public python-contextlib2
+ (package
+ (name "python-contextlib2")
+ (version "0.5.5")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "contextlib2" version))
+ (sha256
+ (base32
+ "0j6ad6lwwyc9kv71skj098v5l7x5biyj2hs4lc5x1kcixqcr97sh"))))
+ (build-system python-build-system)
+ (home-page "http://contextlib2.readthedocs.org/")
+ (synopsis "Tools for decorators and context managers")
+ (description "This module is primarily a backport of the Python
+3.2 contextlib to earlier Python versions. Like contextlib, it
+provides utilities for common tasks involving decorators and context
+managers. It also contains additional features that are not part of
+the standard library.")
+ (license license:psfl)))
+
(define-public python2-contextlib2
(package
(name "python2-contextlib2")
@@ -9717,16 +9829,16 @@ format.")
(define-public python-twisted
(package
(name "python-twisted")
- (version "19.2.0")
+ (version "19.2.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "Twisted" version ".tar.bz2"))
(sha256
(base32
- "1gmb8d57s13d8znvqnxi47vqzqz141z443dbxg9wjkp8ia9f220p"))))
+ "0liymyd4pzphizjlpwkncxjpm9akyr3lkfkm77yfg6wasv108b7s"))))
(build-system python-build-system)
(arguments
- '(#:tests? #f)) ; FIXME: Some tests are failing.
+ '(#:tests? #f)) ; FIXME: some tests fail
(propagated-inputs
`(("python-zope-interface" ,python-zope-interface)
("python-pyhamcrest" ,python-pyhamcrest)
@@ -10349,14 +10461,14 @@ etc.")
(define-public python-stem
(package
(name "python-stem")
- (version "1.7.0")
+ (version "1.7.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "stem" version))
(sha256
(base32
- "1awiglfiajnx2hva9aqpj3fmdvdb4qg7cwnlfyih827m68y3cq8v"))))
+ "18lc95pmc7i089nlsb06dsxyjl5wbhxfqgdxbjcia35ndh8z7sn9"))))
(build-system python-build-system)
(arguments
`(#:phases
@@ -13423,6 +13535,37 @@ belong to tagged versions.")
(define-public python2-setuptools-scm-git-archive
(package-with-python2 python-setuptools-scm-git-archive))
+(define-public python-setuptools-git
+ (package
+ (name "python-setuptools-git")
+ (version "1.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "setuptools-git" version))
+ (sha256
+ (base32
+ "0i84qjwp5m0l9qagdjww2frdh63r37km1c48mrvbmaqsl1ni6r7z"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ ;; This is needed for tests.
+ (add-after 'unpack 'configure-git
+ (lambda _
+ (setenv "HOME" "/tmp")
+ (invoke "git" "config" "--global" "user.email" "guix")
+ (invoke "git" "config" "--global" "user.name" "guix")
+ #t)))))
+ (native-inputs
+ `(("git" ,git-minimal)))
+ (home-page "https://github.com/msabramo/setuptools-git")
+ (synopsis "Setuptools revision control system plugin for Git")
+ (description
+ "This package provides a plugin for Setuptools for revision control with
+Git.")
+ (license license:bsd-3)))
+
(define-public python-pyclipper
(package
(name "python-pyclipper")
@@ -14026,6 +14169,51 @@ source bytes using the UTF-8 encoding and then rewrites Python 3.6 style
@code{f} strings.")
(license license:expat)))
+(define-public python-typed-ast
+ (package
+ (name "python-typed-ast")
+ (version "1.3.5")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "typed-ast" version))
+ (sha256
+ (base32
+ "1m7pr6qpana3cvqwiw7mlvrgvmw27ch5mx1592572xhlki8g85ak"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:modules ((guix build utils)
+ (guix build python-build-system)
+ (ice-9 ftw)
+ (srfi srfi-1)
+ (srfi srfi-26))
+ #:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda _
+ (let ((cwd (getcwd)))
+ (setenv "PYTHONPATH"
+ (string-append cwd "/build/"
+ (find (cut string-prefix? "lib" <>)
+ (scandir (string-append cwd "/build")))
+ ":"
+ (getenv "PYTHONPATH"))))
+ (invoke "pytest")
+ #t)))))
+ (native-inputs `(("python-pytest" ,python-pytest)))
+ (home-page "https://github.com/python/typed_ast")
+ (synopsis "Fork of Python @code{ast} modules with type comment support")
+ (description "This package provides a parser similar to the standard
+@code{ast} library. Unlike @code{ast}, the parsers in @code{typed_ast}
+include PEP 484 type comments and are independent of the version of Python
+under which they are run. The @code{typed_ast} parsers produce the standard
+Python AST (plus type comments), and are both fast and correct, as they are
+based on the CPython 2.7 and 3.7 parsers.")
+ ;; See the file "LICENSE" for the details.
+ (license (list license:psfl
+ license:asl2.0
+ license:expat)))) ;ast27/Parser/spark.py
+
(define-public python-typing
(package
(name "python-typing")
@@ -15113,14 +15301,13 @@ append on old values. Partd excels at shuffling operations.")
(define-public python-dask
(package
(name "python-dask")
- (version "1.2.0")
+ (version "1.2.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dask" version))
(sha256
- (base32
- "1y0dqcp72ixwblgway0jpvfirlxfcmwrjiivdq96firj1hw127sd"))))
+ (base32 "0b29gvf96gmp20wicly3v3mhyc93zbm3mdv935fka6x0wax7cy2y"))))
(build-system python-build-system)
;; A single test out of 5000+ fails. This test is marked as xfail when
;; pytest-xdist is used.
@@ -15331,16 +15518,15 @@ with the HTTP/2-based RPC framework gRPC.")
(define-public python-astunparse
(package
(name "python-astunparse")
- (version "1.6.1")
+ (version "1.6.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "astunparse" version))
(sha256
- (base32
- "1jhidwyrqn17avqh9xnnm3wd7q7aahaq009cba67g86y6gxicyyj"))))
+ (base32 "0rzbc44xcvzjhhiy7wac96mgal5mcjz1mfq8rmvgswskf4kf9cys"))))
(build-system python-build-system)
- (arguments '(#:tests? #f)) ; there are none
+ (arguments '(#:tests? #f)) ; there are none
(propagated-inputs
`(("python-six" ,python-six)
("python-wheel" ,python-wheel)))
@@ -15568,3 +15754,40 @@ by Igor Pavlov.")
(define-public python2-pylzma
(package-with-python2 python-pylzma))
+
+(define-public python-bsddb3
+ (package
+ (name "python-bsddb3")
+ (version "6.2.6")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "bsddb3" version))
+ (sha256
+ (base32
+ "019db2y6bfmiqbrgg9x9f6h72qjmqh05czdn2v5sy9bl0gs23mj2"))))
+ (build-system python-build-system)
+ (inputs
+ `(("bdb" ,bdb)))
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'configure-locations
+ (lambda* (#:key inputs #:allow-other-keys)
+ (setenv "BERKELEYDB_DIR" (assoc-ref inputs "bdb"))
+ (setenv "YES_I_HAVE_THE_RIGHT_TO_USE_THIS_BERKELEY_DB_VERSION" "1")
+ #t))
+ (replace 'check
+ (lambda _
+ (invoke "python3" "test3.py" "-v"))))))
+ (home-page "https://www.jcea.es/programacion/pybsddb.htm")
+ (synopsis "Python bindings for Oracle Berkeley DB")
+ (description
+ "This module provides a nearly complete wrapping of the Oracle/Sleepycat
+C API for the Database Environment, Database, Cursor, Log Cursor, Sequence and
+Transaction objects, and each of these is exposed as a Python type in the
+bsddb3.db module. The database objects can use various access methods: btree,
+hash, recno, and queue. Complete support of Berkeley DB distributed
+transactions. Complete support for Berkeley DB Replication Manager.
+Complete support for Berkeley DB Base Replication. Support for RPC.")
+ (license license:bsd-3)))