diff options
Diffstat (limited to 'gnu/packages/maths.scm')
| -rw-r--r-- | gnu/packages/maths.scm | 109 |
1 files changed, 56 insertions, 53 deletions
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index e432ed5c05..18b06e7765 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -227,14 +227,14 @@ semiconductors.") (define-public gsl (package (name "gsl") - (version "2.2.1") + (version "2.3") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/gsl/gsl-" version ".tar.gz")) (sha256 (base32 - "095hp01d8lkqdvv0p1k25kvbisgfdmvx1rzpyc2i8kl2n33kvlhk")) + "1yxdzqjwmi2aid650fa9zyr8llw069x7lm489wx9nnfdi6vh09an")) (patches (search-patches "gsl-test-i686.patch")))) (build-system gnu-build-system) (arguments @@ -425,40 +425,35 @@ singular value problems.") "See LICENSE in the distribution.")))) (define-public gnuplot - ;; Gnuplot version 5.0.4 was updated in-place, resulting in a hash mismatch. - ;; This can be removed at the next version update. - (let ((upstream-version "5.0.4") - (guix-revision "1")) - (package - (name "gnuplot") - (version (string-append upstream-version "-" guix-revision)) - (source - (origin - (method url-fetch) - (uri (string-append "mirror://sourceforge/gnuplot/gnuplot/" - upstream-version "/gnuplot-" - upstream-version ".tar.gz")) - (sha256 - (base32 - "07n3w12dkcxjnhsvsliaqnkhajhi818v6q8mkpmpbplbf92vh70m")))) - (build-system gnu-build-system) - (inputs `(("readline" ,readline) - ("cairo" ,cairo) - ("pango" ,pango) - ("gd" ,gd))) - (native-inputs `(("pkg-config" ,pkg-config) - ("texlive" ,texlive-minimal))) - (home-page "http://www.gnuplot.info") - (synopsis "Command-line driven graphing utility") - (description "Gnuplot is a portable command-line driven graphing + (package + (name "gnuplot") + (version "5.0.5") + (source (origin + (method url-fetch) + (uri (string-append "mirror://sourceforge/gnuplot/gnuplot/" + version "/gnuplot-" + version ".tar.gz")) + (sha256 + (base32 + "0lr065qdlgss8lmy31l7hkmnk9fp4lvqq9qgb1f1209f36zy1wr5")))) + (build-system gnu-build-system) + (inputs `(("readline" ,readline) + ("cairo" ,cairo) + ("pango" ,pango) + ("gd" ,gd))) + (native-inputs `(("pkg-config" ,pkg-config) + ("texlive" ,texlive-minimal))) + (home-page "http://www.gnuplot.info") + (synopsis "Command-line driven graphing utility") + (description "Gnuplot is a portable command-line driven graphing utility. It was originally created to allow scientists and students to visualize mathematical functions and data interactively, but has grown to support many non-interactive uses such as web scripting. It is also used as a plotting engine by third-party applications like Octave.") - ;; X11 Style with the additional restriction that derived works may only be - ;; distributed as patches to the original. - (license (license:fsf-free - "http://gnuplot.cvs.sourceforge.net/gnuplot/gnuplot/Copyright"))))) + ;; X11 Style with the additional restriction that derived works may only be + ;; distributed as patches to the original. + (license (license:fsf-free + "http://gnuplot.cvs.sourceforge.net/gnuplot/gnuplot/Copyright")))) (define-public gctp (package @@ -549,15 +544,20 @@ incompatible with HDF5.") (define-public hdf5 (package (name "hdf5") - (version "1.8.17") + (version "1.8.18") (source (origin (method url-fetch) - (uri (string-append "http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-" - version "/src/hdf5-" - version ".tar.bz2")) + (uri (list (string-append "http://www.hdfgroup.org/ftp/HDF5/releases/" + "hdf5-" version "/src/hdf5-" + version ".tar.bz2") + (string-append "https://support.hdfgroup.org/ftp/HDF5/" + "current" + (apply string-append + (take (string-split version #\.) 2)) + "/src/hdf5-" version ".tar.bz2"))) (sha256 - (base32 "0sj8x0gfs5fb28gipnynb9wpkz113h8wq9sva9mxx66kv27xsdgw")) + (base32 "13542vrnl1p35n8vbq0wzk40vddmm33q5nh04j98c7r1yjnxxih1")) (patches (list (search-patch "hdf5-config-date.patch"))))) (build-system gnu-build-system) (inputs @@ -709,7 +709,7 @@ HDF5 file is encoded according to the HDF File Format Specification.") (define-public netcdf (package (name "netcdf") - (version "4.4.0") + (version "4.4.1.1") (source (origin (method url-fetch) @@ -717,18 +717,21 @@ HDF5 file is encoded according to the HDF File Format Specification.") "netcdf-" version ".tar.gz")) (sha256 (base32 - "0y6gdcplarwqqnrav2xg1xd6ih732rzzbmdw78v3rl5b8mwcnh0d")) - (patches (list (search-patch "netcdf-config-date.patch"))))) + "1blc7ik5yin7i0ls2kag0a9xjk12m0dzx6v1x88az3ras3scci2d")) + (patches (search-patches "netcdf-date-time.patch" + "netcdf-tst_h_par.patch")))) (build-system gnu-build-system) (native-inputs `(("m4" ,m4) ("doxygen" ,doxygen) ("graphviz" ,graphviz))) (inputs - `(("hdf5" ,hdf5) - ("zlib" ,zlib))) + `(("hdf4" ,hdf4-alt) + ("hdf5" ,hdf5) + ("zlib" ,zlib) + ("libjpeg" ,libjpeg))) (arguments - `(#:configure-flags '("--enable-doxygen" "--enable-dot") + `(#:configure-flags '("--enable-doxygen" "--enable-dot" "--enable-hdf4") #:parallel-tests? #f)) ;various race conditions (home-page "http://www.unidata.ucar.edu/software/netcdf/") (synopsis "Library for scientific data") @@ -953,14 +956,14 @@ script files.") (define-public gmsh (package (name "gmsh") - (version "2.14.1") + (version "2.15.0") (source (origin (method url-fetch) (uri (string-append "http://gmsh.info/src/gmsh-" version "-source.tgz")) (sha256 - (base32 "1vsxp47j6srmy8kqb3p1z9pmlm42whhhz7r0vzpa2a86gga4zx17")) + (base32 "02h7fk4vv8qwnq3ymm409c5sp4nksd0m9h2vkxqmy42l0ic4nalr")) (modules '((guix build utils))) (snippet ;; Remove non-free METIS code @@ -1851,7 +1854,7 @@ to BMP, JPEG or PNG image formats.") (define-public maxima (package (name "maxima") - (version "5.38.1") + (version "5.39.0") (source (origin (method url-fetch) @@ -1859,7 +1862,7 @@ to BMP, JPEG or PNG image formats.") version "-source/" name "-" version ".tar.gz")) (sha256 (base32 - "1p6646rvq43hk09msyp0dk50cqpkh07mf4x0bc2fqisqmcv6b1hf")) + "1cvignn5y6qzrby6qb885yc8zdcdqdr1d50vcvc3gapw2f0gk3zm")) (patches (search-patches "maxima-defsystem-mkdir.patch")))) (build-system gnu-build-system) (inputs @@ -1931,7 +1934,7 @@ point numbers.") (define-public wxmaxima (package (name "wxmaxima") - (version "16.04.2") + (version "16.12.0") (source (origin (method url-fetch) @@ -1939,7 +1942,7 @@ point numbers.") version "/" name "-" version ".tar.gz")) (sha256 (base32 - "1fpqzk1921isiqrpgpf433ldq41924qs9sy99fl1zn5661b2l73n")))) + "01kas9viqabw5id6crbhz8ahjimmv78gqzizs5hgnj9kngrgrm1h")))) (build-system gnu-build-system) (inputs `(("wxwidgets" ,wxwidgets) @@ -1989,14 +1992,14 @@ full text searching.") (define-public armadillo (package (name "armadillo") - (version "7.500.0") + (version "7.600.2") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/arma/armadillo-" version ".tar.xz")) (sha256 (base32 - "1x98d32cgxbzbbma2ak6c37wnbpq13xxyxyd6jjvflv748mzi9ks")))) + "0bac9y46m61zxinj51l82w06v01ra9vw7a9j6rrwdjhznkkdb437")))) (build-system cmake-build-system) (arguments `(#:tests? #f)) ;no test target (inputs @@ -2017,14 +2020,14 @@ associated functions (eg. contiguous and non-contiguous submatrix views).") (define-public armadillo-for-rcpparmadillo (package (inherit armadillo) - (version "7.500.0") + (version "7.600.1") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/arma/armadillo-" version ".tar.xz")) (sha256 (base32 - "1x98d32cgxbzbbma2ak6c37wnbpq13xxyxyd6jjvflv748mzi9ks")))))) + "1dxgfd2r9lbh24nszvqm2lag439s0srxaf1l86f6ww6waqm5r8zk")))))) (define-public muparser ;; When switching download sites, muparser re-issued a 2.2.5 release with a |