diff options
Diffstat (limited to 'gnu/packages/databases.scm')
| -rw-r--r-- | gnu/packages/databases.scm | 124 |
1 files changed, 122 insertions, 2 deletions
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index 87f65404f8..bcf1864775 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -31,6 +31,7 @@ ;;; Copyright © 2015, 2017 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2017 Kristofer Buffington <kristoferbuffington@gmail.com> ;;; Copyright © 2018 Amirouche Boubekki <amirouche@hypermove.net> +;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -58,6 +59,7 @@ #:use-module (gnu packages bison) #:use-module (gnu packages boost) #:use-module (gnu packages check) + #:use-module (gnu packages cmake) #:use-module (gnu packages compression) #:use-module (gnu packages crypto) #:use-module (gnu packages curl) @@ -92,6 +94,7 @@ #:use-module (gnu packages textutils) #:use-module (gnu packages tls) #:use-module (gnu packages valgrind) + #:use-module (gnu packages web) #:use-module (gnu packages xml) #:use-module ((guix licenses) #:prefix license:) #:use-module (guix packages) @@ -1356,7 +1359,7 @@ module, and nothing else.") (define-public perl-sql-abstract (package (name "perl-sql-abstract") - (version "1.84") + (version "1.85") (source (origin (method url-fetch) @@ -1364,7 +1367,7 @@ module, and nothing else.") "SQL-Abstract-" version ".tar.gz")) (sha256 (base32 - "0xayvgv6nic61jm3nhg41rzwgm8h83wfyazvpaks0z7asjillpv5")))) + "1aycggrvppy2zgkwwn85jkdz93n5gsx4dambrjk67k5067hayi4z")))) (build-system perl-build-system) (native-inputs `(("perl-module-install" ,perl-module-install) @@ -2738,3 +2741,120 @@ Replay oplog entries between MongoDB servers Monitor read/write activity on a mongo server @end table") (license license:asl2.0))) + +(define-public apache-arrow + (package + (name "apache-arrow") + (version "0.7.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/apache/arrow") + (commit (string-append "apache-arrow-" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1x7sdd8lbs3nfqjql1pcgbkjc19bls56zmgjayshkmablvlc4dy3")))) + (build-system cmake-build-system) + (arguments + `(#:tests? #f + #:phases + (modify-phases %standard-phases + (add-before 'configure 'enter-source-directory + (lambda _ (chdir "cpp") #t)) + (add-after 'unpack 'set-env + (lambda _ + (setenv "BOOST_ROOT" (assoc-ref %build-inputs "boost")) + (setenv "BROTLI_HOME" (assoc-ref %build-inputs "brotli")) + (setenv "FLATBUFFERS_HOME" (assoc-ref %build-inputs "flatbuffers")) + (setenv "JEMALLOC_HOME" (assoc-ref %build-inputs "jemalloc")) + (setenv "RAPIDJSON_HOME" (assoc-ref %build-inputs "rapidjson")) + #t))) + #:build-type "Release" + #:configure-flags + (list "-DARROW_PYTHON=ON" + + ;; Install to PREFIX/lib (the default is + ;; PREFIX/lib64). + (string-append "-DCMAKE_INSTALL_LIBDIR=" + (assoc-ref %outputs "out") + "/lib") + + ;; XXX These Guix package offer static + ;; libraries that are not position independent, + ;; and ld fails to link them into the arrow .so + "-DARROW_WITH_SNAPPY=OFF" + "-DARROW_WITH_ZLIB=OFF" + "-DARROW_WITH_ZSTD=OFF" + "-DARROW_WITH_LZ4=OFF" + + ;; Building the tests forces on all the + ;; optional features and the use of static + ;; libraries. + "-DARROW_BUILD_TESTS=OFF" + "-DARROW_BUILD_STATIC=OFF"))) + (inputs + `(("boost" ,boost) + ("rapidjson" ,rapidjson) + ("brotli" ,google-brotli) + ("flatbuffers" ,flatbuffers) + ;; Arrow is not yet compatible with jemalloc >= 5: + ;; https://issues.apache.org/jira/browse/ARROW-1141 + ("jemalloc" ,jemalloc-4.5.0) + ("python-3" ,python) + ("python-numpy" ,python-numpy))) + (home-page "https://arrow.apache.org/") + (synopsis "Columnar in-memory analytics") + (description "Apache Arrow is a columnar in-memory analytics layer +designed to accelerate big data. It houses a set of canonical in-memory +representations of flat and hierarchical data along with multiple +language-bindings for structure manipulation. It also provides IPC and common +algorithm implementations.") + (license license:asl2.0))) + +(define-public python-pyarrow + (package + (name "python-pyarrow") + (version "0.7.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/apache/arrow") + (commit (string-append "apache-arrow-" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1x7sdd8lbs3nfqjql1pcgbkjc19bls56zmgjayshkmablvlc4dy3")))) + (build-system python-build-system) + (arguments + '(#:tests? #f ; XXX Test failures related to missing libhdfs, libhdfs3, + ; and "Unsupported numpy type 22". + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'enter-source-directory + (lambda _ (chdir "python") #t)) + (add-after 'unpack 'set-env + (lambda _ + (setenv "ARROW_HOME" (assoc-ref %build-inputs "apache-arrow")) + #t))))) + (propagated-inputs + `(("apache-arrow" ,apache-arrow) + ("python-numpy" ,python-numpy) + ("python-pandas" ,python-pandas) + ("python-six" ,python-six))) + (native-inputs + `(("cmake" ,cmake) + ("python-cython" ,python-cython) + ("python-pytest" ,python-pytest) + ("python-setuptools-scm" ,python-setuptools-scm))) + (home-page "https://arrow.apache.org/docs/python/") + (synopsis "Python bindings for Apache Arrow") + (description "This library provides a Pythonic API wrapper for the reference +Arrow C++ implementation, along with tools for interoperability with pandas, +NumPy, and other traditional Python scientific computing packages.") + (license license:asl2.0))) + +(define-public python2-pyarrow + (package-with-python2 python-pyarrow)) |