diff options
Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 46 |
1 files changed, 23 insertions, 23 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index ea7a3908e8..8426285b7a 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -3,7 +3,7 @@ ;;; Copyright © 2015 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2016, 2017 Ben Woodcroft <donttrustben@gmail.com> ;;; Copyright © 2016, 2017, 2018 Roel Janssen <roel@gnu.org> -;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2017 Raoul Bonnal <ilpuccio.febo@gmail.com> ;;; Copyright © 2018 Vijayalakshmi Vedantham <vijimay12@gmail.com> ;;; Copyright © 2018 Sahithi Yarlagadda <sahi@swecha.net> @@ -1351,7 +1351,7 @@ applications. That is, compute distances and related measures for angular "1a8mi70x79a691r40yiw684jkg1mr9n8agkxlcksxcnrdybs9c0x")))) (build-system r-build-system) (inputs `(("libjpeg" ,libjpeg-turbo))) - (home-page "http://www.rforge.net/jpeg/") + (home-page "https://www.rforge.net/jpeg/") (synopsis "Read and write JPEG images with R") (description "This package provides a way to read, write and display bitmap images stored in the JPEG format with R. It can read and write both @@ -1592,7 +1592,7 @@ error stream.") (sha256 (base32 "121byimd6bg7jbrq5wz5fpi0vxq0vh8g724vkhnjzszbvcv1xsb7")))) (build-system r-build-system) - (home-page "http://mevik.net/work/software/pls.html") + (home-page "https://mevik.net/work/software/pls.html") (synopsis "Partial Least Squares and Principal Component Regression") (description "The pls package implements multivariate regression methods: Partial Least @@ -1979,7 +1979,7 @@ use in R. It also provides a simple way for variable interpolation in R.") (base32 "0z80jxkygmzn11sq0c2iz357s9bpki548lg926g85gldhfj1md90")))) (build-system r-build-system) - (home-page "http://www.rforge.net/fastmatch") + (home-page "https://www.rforge.net/fastmatch") (synopsis "Fast match function") (description "This package provides a fast @code{match} replacement for cases that @@ -4141,7 +4141,7 @@ terminals.") (base32 "0gm9ii7ncvllxbvyk6srsiinjmqyj7lmh84w43x4nhqpvafj9q4q")))) (build-system r-build-system) - (home-page "http://www.rforge.net/uuid") + (home-page "https://www.rforge.net/uuid") (synopsis "Tools for generating and handling of UUIDs") (description "This package provides tools for generating and handling of @@ -4513,7 +4513,7 @@ University Press, 2000.") `(("r-leaps" ,r-leaps) ("r-locfit" ,r-locfit) ("r-mgcv" ,r-mgcv))) - (home-page "http://www.stat.uiowa.edu/~kchan/TSA.htm") + (home-page "https://homepage.divms.uiowa.edu/~kchan/TSA.htm") (synopsis "Time series analysis") (description "This package contains R functions and datasets detailed in the book @@ -4926,7 +4926,7 @@ files.") (propagated-inputs `(("r-shiny" ,r-shiny) ("r-jsonlite" ,r-jsonlite))) - (home-page "http://cran.r-project.org/web/packages/shinyAce") + (home-page "https://cran.r-project.org/web/packages/shinyAce/") (synopsis "Ace editor bindings for Shiny") (description "This package provides Ace editor bindings to enable a rich text editing @@ -5077,7 +5077,7 @@ It also includes interpolation functions.") "00j6b8b6xsx6v370h220x233rpk6asca78165y3d48jpwvwisdc9")))) (build-system r-build-system) (propagated-inputs `(("r-proto" ,r-proto))) - (home-page "http://gsubfn.googlecode.com") + (home-page "https://code.google.com/archive/p/gsubfn/") (synopsis "Utilities for strings and function arguments.") (description "This package provides @code{gsubfn} which is like @code{gsub} but can @@ -6878,7 +6878,7 @@ containing one or more SNPs that evolved under directional selection.") (propagated-inputs `(("r-plyr" ,r-plyr) ("r-rcpp" ,r-rcpp))) - (home-page "http://expasy.org/tools/pROC/") + (home-page "https://web.expasy.org/pROC/") (synopsis "Display and analyze ROC curves") (description "This package provides tools for visualizing, smoothing and comparing @@ -9253,7 +9253,7 @@ package provides a minimal R interface by relying on the Rcpp package.") "1mhd6vp47xmfw533h0pkvydv96m57fspvd85g8m7iqb5rcxvhhdb")))) (properties `((upstream-name . "RcppParallel"))) (build-system r-build-system) - (home-page "http://rcppcore.github.io/RcppParallel") + (home-page "https://rcppcore.github.io/RcppParallel/") (synopsis "Parallel programming tools for Rcpp") (description "This package provides high level functions for parallel programming with @@ -9579,7 +9579,7 @@ related functions.") (base32 "0scar396wiq6wkbkvwp4qrxqc1m075y56p37i6iry5rw796p1i86")))) (build-system r-build-system) - (home-page "http://www.rmetrics.org") + (home-page "https://www.rmetrics.org") (synopsis "Stable distribution functions") (description "This package provides density, probability and quantile functions, and @@ -9698,7 +9698,7 @@ redundant complex conjugate when the input is real data.") `(("libtiff" ,libtiff) ("libjpeg" ,libjpeg-turbo) ("zlib" ,zlib))) - (home-page "http://www.rforge.net/tiff/") + (home-page "https://www.rforge.net/tiff/") (synopsis "Read and write TIFF images") (description "This package provides an easy and simple way to read, write and display @@ -10317,7 +10317,7 @@ conditional reporting based on the current \"output level\".") ("r-reportr" ,r-reportr) ("r-rnifti" ,r-rnifti) ("r-shades" ,r-shades))) - (home-page "http://www.tractor-mri.org.uk") + (home-page "https://www.tractor-mri.org.uk") (synopsis "Read, manipulate and visualize magnetic resonance images") (description "This package provides functions for working with magnetic resonance @@ -10440,7 +10440,7 @@ the combination of non-negative and non-positive constraints.") (properties `((upstream-name . "Iso"))) (build-system r-build-system) (native-inputs `(("gfortran" ,gfortran))) - (home-page "http://www.stat.auckland.ac.nz/~rolf/") + (home-page "https://www.stat.auckland.ac.nz/~rolf/") (synopsis "Functions to perform isotonic regression") (description "This package provides support for linear order and unimodal @@ -11492,7 +11492,7 @@ model with finite state space using the Aalen-Johansen estimator.") ("r-plyr" ,r-plyr) ("r-survival" ,r-survival) ("r-zoo" ,r-zoo))) - (home-page "http://BendixCarstensen.com/Epi/") + (home-page "https://BendixCarstensen.com/Epi/") (synopsis "Statistical analysis in epidemiology") (description "This package provides functions for demographic and epidemiological @@ -12929,7 +12929,7 @@ Hubbell's @dfn{Unified Neutral Theory of Biodiversity} (UNTB).") (base32 "1lbx1bxwkf9dw6q46w40pp7h5nkxgghmx8rkpaymm6iybc7gyir2")))) (build-system r-build-system) - (home-page "http://stat.sfu.ca/statgen/research/stepwise.html") + (home-page "https://stat.sfu.ca/statgen/research/stepwise.html") (synopsis "Stepwise detection of recombination breakpoints") (description "This package provides a stepwise approach to identifying recombination @@ -13535,7 +13535,7 @@ inbred lines, F2 intercrosses, and association mapping populations.") `(("r-genetics" ,r-genetics) ("r-rcpp" ,r-rcpp) ("r-snpstats" ,r-snpstats))) - (home-page "http://stat.sfu.ca/statgen/research/ldheatmap.html") + (home-page "https://stat.sfu.ca/statgen/research/ldheatmap.html") (synopsis "Graphical display of pairwise linkage disequilibria between SNPs") (description "This package provides tools to produce a graphical display, as a heat @@ -13752,7 +13752,7 @@ variance components, using the likelihood-ratio statistics G.") (base32 "0qs5jl0snzfchgpp6pabncwywxcmi743g91jvjiyyzw0lw85yv4s")))) (build-system r-build-system) - (home-page "http://stat.sfu.ca/statgen/research/hapassoc.html") + (home-page "https://stat.sfu.ca/statgen/research/hapassoc.html") (synopsis "Inference of trait associations with SNP haplotypes") (description "Hapassoc performs likelihood inference of trait associations with @@ -13848,7 +13848,7 @@ the corresponding outputs (tables and graphs).") ("jdk" ,icedtea-8 "jdk") ("pcre" ,pcre) ("zlib" ,zlib))) - (home-page "http://www.rforge.net/rJava/") + (home-page "https://www.rforge.net/rJava/") (synopsis "Low-Level R to Java interface") (description "This package provides a low-level interface to the Java VM very much @@ -16880,7 +16880,7 @@ data.") (build-system r-build-system) (propagated-inputs `(("r-lars" ,r-lars))) - (home-page "http://www.stat.umn.edu/~hzou") + (home-page "http://users.stat.umn.edu/~zouxx019/") (synopsis "Elastic-Net for sparse estimation and sparse PCA") (description "This package provides functions for fitting the entire solution path of @@ -17768,7 +17768,7 @@ errors.") ("r-rcpp" ,r-rcpp) ("r-stringr" ,r-stringr) ("r-xml" ,r-xml))) - (home-page "http://dusp.mit.edu/faculty/ezra-glenn") + (home-page "https://dusp.mit.edu/faculty/ezra-haber-glenn") (synopsis "Work with data from the US Census") (description "This package provides a general toolkit for downloading, managing, @@ -18345,7 +18345,7 @@ number embedded in the file rather than the file extension.") ("r-readbitmap" ,r-readbitmap) ("r-stringr" ,r-stringr))) (native-inputs `(("pkg-config" ,pkg-config))) - (home-page "http://dahtah.github.io/imager") + (home-page "https://dahtah.github.io/imager/") (synopsis "Image processing library") (description "This is a package for fast image processing for images in up to 4 @@ -19044,7 +19044,7 @@ OpenMP.") (build-system r-build-system) (propagated-inputs `(("r-quantreg" ,r-quantreg))) - (home-page "http://www.ms.uky.edu/~mai/EmpLik.html") + (home-page "https://www.ms.uky.edu/~mai/EmpLik.html") (synopsis "Empirical likelihood ratio for censored/truncated data") (description "This package provides empirical likelihood ratio tests for |