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-rw-r--r--gnu/packages/cran.scm111
1 files changed, 79 insertions, 32 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index d3d6f7f4f0..fc5d40186c 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -2786,14 +2786,14 @@ Delaunay triangulation and convex hull computation.")
(define-public r-ddalpha
(package
(name "r-ddalpha")
- (version "1.3.9")
+ (version "1.3.10")
(source
(origin
(method url-fetch)
(uri (cran-uri "ddalpha" version))
(sha256
(base32
- "1vzs0cvl6xw3h9i00rg3hs02xwgxcnh8326y10kxmhs3qq4m7nb2"))))
+ "1064g7y8d7kmvd5kjc2m48yvidmh2ci1y0xgil3pcx4ix6mf0ljz"))))
(build-system r-build-system)
(propagated-inputs
`(("r-bh" ,r-bh)
@@ -3163,14 +3163,14 @@ Laplace approximation and adaptive Gauss-Hermite quadrature.")
(define-public r-jomo
(package
(name "r-jomo")
- (version "2.6-9")
+ (version "2.6-10")
(source
(origin
(method url-fetch)
(uri (cran-uri "jomo" version))
(sha256
(base32
- "16ychdhhv8cii8zrdfdf5gzgnvmfaq573bmi00xqdf323q3lf3xr"))))
+ "1k9l4290g350zbw1pjs871q9bxj3j2h1dilxpp06v4wy4n7d8qs0"))))
(build-system r-build-system)
(propagated-inputs
`(("r-lme4" ,r-lme4)
@@ -6527,25 +6527,51 @@ comparisons to Cohen's d are offered based on Huberty & Lowman's Percentage of
Group (Non-)Overlap considerations.")
(license license:gpl2)))
+(define-public r-deriv
+ (package
+ (name "r-deriv")
+ (version "3.9.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "Deriv" version))
+ (sha256
+ (base32
+ "0hlqm216bg3l79gq6m0am0xz6vd3l2hgjnjm6lym3mkmgkka4kxw"))))
+ (properties `((upstream-name . "Deriv")))
+ (build-system r-build-system)
+ (home-page "https://cran.r-project.org/web/packages/Deriv")
+ (synopsis "Symbolic differentiation")
+ (description
+ "This package provides an R-based solution for symbolic differentiation.
+It admits user-defined functions as well as function substitution in arguments
+of functions to be differentiated. Some symbolic simplification is part of
+the work.")
+ (license license:gpl3+)))
+
(define-public r-doby
(package
(name "r-doby")
- (version "4.6-2")
+ (version "4.6-3")
(source
(origin
(method url-fetch)
(uri (cran-uri "doBy" version))
(sha256
(base32
- "02vbv9nfgywg6lsiialkmfnax5z3rkyb9nr8j9l2cp8xi6ml95mb"))))
+ "1d0d6pwai1g4i5jls0jm9va29ci5hy92n5957608f3fzi1jwy635"))))
(properties `((upstream-name . "doBy")))
(build-system r-build-system)
(propagated-inputs
- `(("r-dplyr" ,r-dplyr)
+ `(("r-broom" ,r-broom)
+ ("r-deriv" ,r-deriv)
+ ("r-dplyr" ,r-dplyr)
("r-magrittr" ,r-magrittr)
("r-mass" ,r-mass)
("r-matrix" ,r-matrix)
- ("r-plyr" ,r-plyr)))
+ ("r-plyr" ,r-plyr)
+ ("r-pbkrtest" ,r-pbkrtest)
+ ("r-tibble" ,r-tibble)))
(home-page "http://people.math.aau.dk/~sorenh/software/doBy/")
(synopsis "Groupwise statistics, LSmeans, linear contrasts, and utilities")
(description
@@ -6717,13 +6743,13 @@ the analyzed items.")
(define-public r-slam
(package
(name "r-slam")
- (version "0.1-45")
+ (version "0.1-46")
(source
(origin
(method url-fetch)
(uri (cran-uri "slam" version))
(sha256
- (base32 "0xvj8va6xd7zkn3l4a5ad7v62s7xmkz8frq7gpcl3b6vqwckkaw4"))))
+ (base32 "1ihhbx76miwys35gsbhijriadvrw4f51lc3v45pnn6cvcfd9hr0b"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/slam/")
(synopsis "Sparse lightweight arrays and matrices")
@@ -7964,14 +7990,14 @@ Hothorn, Westfall, 2010, CRC Press).")
(define-public r-emmeans
(package
(name "r-emmeans")
- (version "1.4.1")
+ (version "1.4.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "emmeans" version))
(sha256
(base32
- "1fpawaxnmj67md169a9mzrnnh2d0c973xydfg6hw865933jil9lq"))))
+ "1sxwbh6sym2shrj7gva8q96ca2csqz3081q4d84avpxz15dfz1z1"))))
(build-system r-build-system)
(propagated-inputs
`(("r-estimability" ,r-estimability)
@@ -8197,14 +8223,14 @@ differentiation.")
(define-public r-bayestestr
(package
(name "r-bayestestr")
- (version "0.3.0")
+ (version "0.4.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "bayestestR" version))
(sha256
(base32
- "0r453zb106hj9w53jjgckxqajjf7shlrgv10gjxsv8if6qybdz5b"))))
+ "1d3f50rzjzgzclwd6j887dssyhv7hdq7pik9nnlr3w775v3f69zc"))))
(properties `((upstream-name . "bayestestR")))
(build-system r-build-system)
(propagated-inputs
@@ -8222,14 +8248,14 @@ ROPE percentage and pd).")
(define-public r-performance
(package
(name "r-performance")
- (version "0.3.0")
+ (version "0.4.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "performance" version))
(sha256
(base32
- "13j74ffhx950kacs86ixx84nviq9qlwzr7hjnhkmzw2hspjxq99w"))))
+ "0lxpmp9smn5r3xvfik36nr608wcpmmximjh0v2sckyvjf7hnb4s0"))))
(build-system r-build-system)
(propagated-inputs
`(("r-bayestestr" ,r-bayestestr)
@@ -8968,14 +8994,14 @@ other values.")
(define-public r-ncdf4
(package
(name "r-ncdf4")
- (version "1.16.1")
+ (version "1.17")
(source
(origin
(method url-fetch)
(uri (cran-uri "ncdf4" version))
(sha256
(base32
- "083sb24anyd4sw0il3x07pqn9rbx5y5ayqass6mz8x443rnjvphd"))))
+ "1xls44ln2zjrrlimxl8v4bk2ni3g45c9j0gxdnjx31rikmrc95fv"))))
(build-system r-build-system)
(inputs
`(("netcdf" ,netcdf)
@@ -8995,14 +9021,14 @@ netCDF files.")
(define-public r-biocmanager
(package
(name "r-biocmanager")
- (version "1.30.8")
+ (version "1.30.9")
(source
(origin
(method url-fetch)
(uri (cran-uri "BiocManager" version))
(sha256
(base32
- "0pqgb7j4aqpcp3bapl313rmyxxj3j96s9csip4f65444gjy5r2x2"))))
+ "1l9b2mr99nhpvk1wkd93397i0d6z4vvbq3zm8dk86gb1pfci26sx"))))
(properties `((upstream-name . "BiocManager")))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/BiocManager/")
@@ -10853,14 +10879,14 @@ This makes it a convenient and fast interface to C/C++ and Fortran code.")
(define-public r-spam
(package
(name "r-spam")
- (version "2.3-0")
+ (version "2.3-0.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "spam" version))
(sha256
(base32
- "194n5mgvyms9ckjqixl3h33apii8h9kqspqg2si9k741k578qb3w"))))
+ "0mas2ra7d5f9ccwxwsvxls3dz53prpf59hi2a0rvc347wbm6540b"))))
(build-system r-build-system)
(propagated-inputs
`(("r-dotcall64" ,r-dotcall64)))
@@ -11709,18 +11735,17 @@ users of rARPACK are advised to switch to the RSpectra package.")
(define-public r-compositions
(package
(name "r-compositions")
- (version "1.40-2")
+ (version "1.40-3")
(source
(origin
(method url-fetch)
(uri (cran-uri "compositions" version))
(sha256
(base32
- "12mp05yi7jkdqg9iwh6bc9sx6sdxagcnrirznxy9hq8502p7238i"))))
+ "103hbmibrf1n333pn4xpll1gqqsv4szms0n5gdq7zak31aar0bg4"))))
(build-system r-build-system)
(propagated-inputs
`(("r-bayesm" ,r-bayesm)
- ("r-energy" ,r-energy)
("r-robustbase" ,r-robustbase)
("r-tensora" ,r-tensora)))
(home-page "http://www.stat.boogaart.de/compositions")
@@ -12529,21 +12554,43 @@ The bedr package's API enhances access to these tools as well as offers
additional utilities for genomic regions processing.")
(license license:gpl2)))
+(define-public r-sets
+ (package
+ (name "r-sets")
+ (version "1.0-18")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "sets" version))
+ (sha256
+ (base32
+ "16v7650p47khqrbbw0z98llmwmmhswqmhri0n7nrfhdqwmby1lbl"))))
+ (properties `((upstream-name . "sets")))
+ (build-system r-build-system)
+ (home-page "https://cran.r-project.org/web/packages/sets")
+ (synopsis "Sets, generalized sets, customizable sets and intervals")
+ (description
+ "This package provides data structures and basic operations for ordinary
+sets, generalizations such as fuzzy sets, multisets, and fuzzy multisets,
+customizable sets, and intervals.")
+ (license license:gpl2)))
+
(define-public r-partitions
(package
(name "r-partitions")
- (version "1.9-19")
+ (version "1.9-22")
(source
(origin
(method url-fetch)
(uri (cran-uri "partitions" version))
(sha256
(base32
- "1pklfnjdc094c8nzkqcdvqzdh8v3p5n8jbg4pf9678iw648saiyx"))))
+ "1qqy4df28wy4q0g572azrj171jlhvrnzbh7x0wr2g7v6gr20y0ns"))))
(build-system r-build-system)
(propagated-inputs
`(("r-gmp" ,r-gmp)
- ("r-polynom" ,r-polynom)))
+ ("r-polynom" ,r-polynom)
+ ("r-sets" ,r-sets)))
(home-page "https://cran.r-project.org/web/packages/partitions")
(synopsis "Additive partitions of integers")
(description
@@ -14066,14 +14113,14 @@ discriminant analysis for the purpose of classifying high dimensional data.")
(define-public r-ggvis
(package
(name "r-ggvis")
- (version "0.4.4")
+ (version "0.4.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "ggvis" version))
(sha256
(base32
- "1bxggjr2313kfy895j0fvrv4bg7yh2z87907lk48i1kn5c9flchk"))))
+ "091i9f17912j8qcyxppjgwzjnyqj7769ixs9d2gjg6f2clskqdw2"))))
(build-system r-build-system)
(propagated-inputs
`(("r-assertthat" ,r-assertthat)
@@ -14746,14 +14793,14 @@ engine (Salmon et al., 2011) as provided by the package @code{sitmo}.")
(define-public r-dalex
(package
(name "r-dalex")
- (version "0.4.7")
+ (version "0.4.9")
(source
(origin
(method url-fetch)
(uri (cran-uri "DALEX" version))
(sha256
(base32
- "0iiwkf0pfdb90lf1xhv43qd32z3cjmkmf0ly9841n5lldkjazy3h"))))
+ "1zviaf7530v8w996lbma0vplabrapgwldi7h70pr0439sxaqd421"))))
(properties `((upstream-name . "DALEX")))
(build-system r-build-system)
(propagated-inputs `(("r-ggplot2" ,r-ggplot2)))
generated by cgit v1.2.3 (git 2.25.4) at 2024-06-30 12:12:59 +0000