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Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 32 |
1 files changed, 32 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 3093d7ead6..092c49d8cb 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -13113,6 +13113,38 @@ descriptive settings file. The result is a set of comprehensive, interactive HTML reports with interesting findings about your samples.") (license license:gpl3+))) +(define-public genrich + (package + (name "genrich") + (version "0.5") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/jsh58/Genrich.git") + (commit (string-append "v" version)))) + (sha256 + (base32 + "0x0q6z0208n3cxzqjla4rgjqpyqgwpmz27852lcvzkzaigymq4zp")))) + (build-system gnu-build-system) + (arguments + `(#:tests? #f ; there are none + #:phases + (modify-phases %standard-phases + (delete 'configure) + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (install-file "Genrich" (string-append (assoc-ref outputs "out") "/bin")) + #t))))) + (inputs + `(("zlib" ,zlib))) + (home-page "https://github.com/jsh58/Genrich") + (synopsis "Detecting sites of genomic enrichment") + (description "Genrich is a peak-caller for genomic enrichment +assays (e.g. ChIP-seq, ATAC-seq). It analyzes alignment files generated +following the assay and produces a file detailing peaks of significant +enrichment.") + (license license:expat))) + (define-public mantis (let ((commit "4ffd171632c2cb0056a86d709dfd2bf21bc69b84") (revision "1")) |