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| -rw-r--r-- | gnu/packages/bioconductor.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 0f3342007f..f84b609f56 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -6600,3 +6600,29 @@ gene expression.") "This package provides tools for Bayesian integrated analysis of Affymetrix GeneChips.") (license license:gpl2))) + +(define-public r-bhc + (package + (name "r-bhc") + (version "1.38.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "BHC" version)) + (sha256 + (base32 + "1bxx3jak8mgvay3j1xd59bb9j86pzl6hh5abxww9x1b7rswmy1jh")))) + (properties `((upstream-name . "BHC"))) + (build-system r-build-system) + (home-page "https://bioconductor.org/packages/BHC/") + (synopsis "Bayesian hierarchical clustering") + (description + "The method implemented in this package performs bottom-up hierarchical +clustering, using a Dirichlet Process (infinite mixture) to model uncertainty +in the data and Bayesian model selection to decide at each step which clusters +to merge. This avoids several limitations of traditional methods, for example +how many clusters there should be and how to choose a principled distance +metric. This implementation accepts multinomial (i.e. discrete, with 2+ +categories) or time-series data. This version also includes a randomised +algorithm which is more efficient for larger data sets.") + (license license:gpl3))) |