diff options
| -rw-r--r-- | gnu/packages/databases.scm | 564 | ||||
| -rw-r--r-- | gnu/packages/medical.scm | 1 | ||||
| -rw-r--r-- | gnu/packages/nutrition.scm | 1 | ||||
| -rw-r--r-- | gnu/packages/python-web.scm | 1 | ||||
| -rw-r--r-- | gnu/packages/python.scm | 546 | ||||
| -rw-r--r-- | gnu/packages/tryton.scm | 1 |
6 files changed, 562 insertions, 552 deletions
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index 6bc468679a..b825a24528 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -1,27 +1,34 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2012, 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> -;;; Copyright © 2012, 2014, 2015 Andreas Enge <andreas@enge.fr> -;;; Copyright © 2013 Cyril Roelandt <tipecaml@gmail.com> +;;; Copyright © 2012, 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr> +;;; Copyright © 2013, 2017 Cyril Roelandt <tipecaml@gmail.com> ;;; Copyright © 2014, 2016 David Thompson <davet@gnu.org> ;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org> -;;; Copyright © 2015 Eric Bavier <bavier@member.fsf.org> +;;; Copyright © 2014, 2015 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2015, 2016 Sou Bunnbu <iyzsong@gmail.com> ;;; Copyright © 2015 Leo Famulari <leo@famulari.name> -;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr> +;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com> +;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org> +;;; Copyright © 2015, 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016, 2017 ng0 <contact.ng0@cryptolab.net> ;;; Copyright © 2016, 2017 Roel Janssen <roel@gnu.org> ;;; Copyright © 2016 David Craven <david@craven.ch> ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> ;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca> -;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com> +;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org> +;;; Copyright © 2016, 2017 Marius Bakke <mbakke@fastmail.com> +;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu> ;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be> +;;; Copyright © 2017 Jelle Licht <jlicht@fsfe.org> +;;; Copyright © 2017 Adriano Peluso <catonano@gmail.com> ;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net> ;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2017 Alex Vong <alexvong1995@gmail.com> ;;; Copyright © 2017 Ben Woodcroft <donttrustben@gmail.com> ;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com> ;;; Copyright © 2017 Pierre Langlois <pierre.langlois@gmx.com> -;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2015, 2017 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2017 Kristofer Buffington <kristoferbuffington@gmail.com> ;;; ;;; This file is part of GNU Guix. @@ -1950,3 +1957,548 @@ package contains an old implementation based on legacy code from S-PLUS which is being phased out. A modern MySQL client based on Rcpp is available from the RMariaDB package.") (license license:gpl2))) + +(define-public python-ccm + (package + (name "python-ccm") + (version "2.1.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ccm" version)) + (sha256 + (base32 + "177dfxsmk3k4cih6fh6v8d91bh4nqx7ns6pc07w7m7i3cvdx3c8n")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pyyaml" ,python-pyyaml) + ;; Not listed in setup.py, but used in ccmlib/node.py for full + ;; functionality + ("python-psutil" ,python-psutil) + ("python-six" ,python-six))) + (home-page "https://github.com/pcmanus/ccm") + (synopsis "Cassandra Cluster Manager for Apache Cassandra clusters on +localhost") + (description "Cassandra Cluster Manager is a development tool for testing +local Cassandra clusters. It creates, launches and removes Cassandra clusters +on localhost.") + (license license:asl2.0))) + +(define-public python2-ccm + (package-with-python2 python-ccm)) + +(define-public python2-pysqlite + (package + (name "python2-pysqlite") + (version "2.8.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pysqlite" version)) + (sha256 + (base32 + "1424gwq9sil2ffmnizk60q36vydkv8rxs6m7xs987kz8cdc37lqp")))) + (build-system python-build-system) + (inputs + `(("sqlite" ,sqlite))) + (arguments + `(#:python ,python-2 ; incompatible with Python 3 + #:tests? #f)) ; no test target + (home-page "https://github.com/ghaering/pysqlite") + (synopsis "SQLite bindings for Python") + (description + "Pysqlite provides SQLite bindings for Python that comply to the +Database API 2.0T.") + (license license:zlib))) + +(define-public python-sqlalchemy + (package + (name "python-sqlalchemy") + (version "1.0.12") + (source + (origin + (method url-fetch) + (uri (string-append "https://pypi.python.org/packages/source/S/" + "SQLAlchemy/SQLAlchemy-" version ".tar.gz")) + (sha256 + (base32 + "1l8qclhd0s90w3pvwhi5mjxdwr5j7gw7cjka2fx6f2vqmq7f4yb6")))) + (build-system python-build-system) + (native-inputs + `(("python-cython" ,python-cython) ;for c extensions + ("python-pytest" ,python-pytest) + ("python-mock" ,python-mock))) ;for tests + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (zero? (system* "py.test"))))))) + (home-page "http://www.sqlalchemy.org") + (synopsis "Database abstraction library") + (description + "SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that +gives application developers the full power and flexibility of SQL. It +provides a full suite of well known enterprise-level persistence patterns, +designed for efficient and high-performing database access, adapted into a +simple and Pythonic domain language.") + (license license:x11))) + +(define-public python2-sqlalchemy + (package-with-python2 python-sqlalchemy)) + +(define-public python-sqlalchemy-utils + (package + (name "python-sqlalchemy-utils") + (version "0.32.13") + (source + (origin + (method url-fetch) + (uri (pypi-uri "SQLAlchemy-Utils" version)) + (sha256 + (base32 + "0vsib7gidjamzsz6w4s5pdhxzxsrkghjnm4sqwk94igjrl3i5ixj")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; FIXME: Many tests require a running database server. + ;; #:phases + ;; (modify-phases %standard-phases + ;; (replace 'check + ;; (lambda _ + ;; (zero? (system* "py.test" "sqlalchemy_utils" "tests"))))) + (propagated-inputs + `(("python-six" ,python-six) + ("python-sqlalchemy" ,python-sqlalchemy))) + (native-inputs + `(("python-dateutil" ,python-dateutil) + ("python-flexmock" ,python-flexmock) + ("python-psycopg2" ,python-psycopg2) + ("python-pytest" ,python-pytest) + ("python-pytz" ,python-pytz))) + (home-page "https://github.com/kvesteri/sqlalchemy-utils") + (synopsis "Various utility functions for SQLAlchemy") + (description + "SQLAlchemy-utils provides various utility functions and custom data types +for SQLAlchemy. SQLAlchemy is an SQL database abstraction library for Python. + +You might also want to install the following optional dependencies: +@enumerate +@item @code{python-passlib} +@item @code{python-babel} +@item @code{python-cryptography} +@item @code{python-pytz} +@item @code{python-psycopg2} +@item @code{python-furl} +@item @code{python-flask-babel} +@end enumerate +") + (license license:bsd-3))) + +(define-public python2-sqlalchemy-utils + (package-with-python2 python-sqlalchemy-utils)) + +(define-public python-alembic + (package + (name "python-alembic") + (version "0.9.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "alembic" version)) + (sha256 + (base32 + "01gx2syqbaxh4hr9pf7pxhlb6p36qaf99140dy19lsx1paxb9p4b")))) + (build-system python-build-system) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest-cov" ,python-pytest-cov))) + (propagated-inputs + `(("python-dateutil" ,python-dateutil) + ("python-sqlalchemy" ,python-sqlalchemy) + ("python-mako" ,python-mako) + ("python-editor" ,python-editor))) + (home-page "http://bitbucket.org/zzzeek/alembic") + (synopsis + "Database migration tool for SQLAlchemy") + (description + "Alembic is a lightweight database migration tool for usage with the +SQLAlchemy Database Toolkit for Python.") + (license license:expat))) + +(define-public python2-alembic + (package-with-python2 python-alembic)) + +(define-public python-pickleshare + (package + (name "python-pickleshare") + (version "0.5") + (source + (origin + (method url-fetch) + (uri (string-append "https://pypi.python.org/packages/source/p/" + "pickleshare/pickleshare-" version ".tar.gz")) + (sha256 + (base32 "11ljr90j3p6qswdrbl7p4cjb2i93f6vn0vx9anzpshsx0d2mggn0")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pathpy" ,python-pathpy))) + (home-page "https://github.com/vivainio/pickleshare") + (synopsis "Tiny key value database with concurrency support") + (description + "PickleShare is a small ‘shelve’-like datastore with concurrency support. +Like shelve, a PickleShareDB object acts like a normal dictionary. Unlike +shelve, many processes can access the database simultaneously. Changing a +value in database is immediately visible to other processes accessing the same +database. Concurrency is possible because the values are stored in separate +files. Hence the “database” is a directory where all files are governed by +PickleShare.") + (license license:expat))) + +(define-public python2-pickleshare + (package-with-python2 python-pickleshare)) + +(define-public python-apsw + (package + (name "python-apsw") + (version "3.9.2-r1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "apsw" version)) + (sha256 + (base32 + "0w4jb0wpx785qw42r3h4fh7gl5w2968q48i7gygybsfxck8nzffs")))) + (build-system python-build-system) + (inputs + `(("sqlite" ,sqlite))) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'build + (lambda _ + (zero? + (system* "python" "setup.py" "build" "--enable-all-extensions")))) + (add-after 'build 'build-test-helper + (lambda _ + (zero? + (system + (string-append "gcc -fPIC -shared -o ./testextension.sqlext " + "-I. -Isqlite3 src/testextension.c") )))) + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (zero? (system* "python" "setup.py" "test"))))))) + (home-page "https://github.com/rogerbinns/apsw/") + (synopsis "Another Python SQLite Wrapper") + (description "APSW is a Python wrapper for the SQLite +embedded relational database engine. In contrast to other wrappers such as +pysqlite it focuses on being a minimal layer over SQLite attempting just to +translate the complete SQLite API into Python.") + (license license:zlib))) + +(define-public python2-apsw + (package-with-python2 python-apsw)) + +(define-public python2-neo4j-driver + (package + (name "python2-neo4j-driver") + ;; NOTE: When upgrading to 1.5.0, please add a python3 variant. + (version "1.4.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "neo4j-driver" version)) + (sha256 + (base32 + "011r1vh182p8mm83d8dz9rfnc3l7rf7fd00cyrbyfzi71jmc4g98")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (home-page "https://neo4j.com/developer/python/") + (synopsis "Neo4j driver code written in Python") + (description "This package provides the Neo4j Python driver that connects +to the database using Neo4j's binary protocol. It aims to be minimal, while +being idiomatic to Python.") + (license license:asl2.0))) + +(define-public python2-py2neo + (package + (name "python2-py2neo") + (version "3.1.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "py2neo" version)) + (sha256 + (base32 + "1f1q95vqcvlc3nsc33p841swnjdcjazddlq2dzi3qfnjqjrajxw1")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (home-page "http://py2neo.org") + (synopsis "Library and toolkit for working with Neo4j in Python") + (description "This package provides a client library and toolkit for +working with Neo4j from within Python applications and from the command +line. The core library has no external dependencies and has been carefully +designed to be easy and intuitive to use.") + (license license:asl2.0))) + +(define-public python-psycopg2 + (package + (name "python-psycopg2") + (version "2.7.3.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "psycopg2" version)) + (sha256 + (base32 + "0rda1j02ds6s28752fhmpwg761sh6jsxi1gpczqkrd28cki1cywv")))) + (build-system python-build-system) + (arguments + ;; Tests would require a postgresql database "psycopg2_test" + ;; and a running postgresql database management service. + `(#:tests? #f)) ; TODO re-enable after providing a test-db. + (inputs + `(("postgresql" ,postgresql))) ; libpq + (home-page "http://initd.org/psycopg/") + (synopsis "Python PostgreSQL adapter") + (description + "psycopg2 is a thread-safe PostgreSQL adapter that implements DB-API 2.0. ") + (license license:lgpl3+))) + +(define-public python2-psycopg2 + (package-with-python2 python-psycopg2)) + +(define-public python-sadisplay + (package + (name "python-sadisplay") + (version "0.4.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "sadisplay" version)) + (sha256 + (base32 + "0zqad2fl7q26p090qmqgmxbm6iwgf9zij1w8da1g3wdgjj72ql05")))) + (build-system python-build-system) + (propagated-inputs + `(("python-sqlalchemy" ,python-sqlalchemy))) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://bitbucket.org/estin/sadisplay") + (synopsis "SQLAlchemy schema displayer") + (description "This package provides a program to build Entity +Relationship diagrams from a SQLAlchemy model (or directly from the +database).") + (license license:bsd-3))) + +(define-public python2-sadisplay + (package-with-python2 python-sadisplay)) + +(define-public python-mysqlclient + (package + (name "python-mysqlclient") + (version "1.3.10") + (source + (origin + (method url-fetch) + (uri (pypi-uri "mysqlclient" version)) + (sha256 + (base32 + "0qkj570x4rbsblji6frvsvp2v1ap32dqzj1lq62zp9515ffsyaj5")))) + (build-system python-build-system) + (native-inputs + `(("mariadb" ,mariadb) + ("nose" ,python-nose) + ("mock" ,python-mock) + ("py.test" ,python-pytest))) + (inputs + `(("mysql" ,mysql) + ("libz" ,zlib) + ("openssl" ,openssl))) + (home-page "https://github.com/PyMySQL/mysqlclient-python") + (synopsis "MySQLdb is an interface to the popular MySQL database server for Python") + (description "MySQLdb is an interface to the popular MySQL database server +for Python. The design goals are: +@enumerate +@item Compliance with Python database API version 2.0 [PEP-0249], +@item Thread-safety, +@item Thread-friendliness (threads will not block each other). +@end enumerate") + (license license:gpl2))) + +(define-public python2-mysqlclient + (package-with-python2 python-mysqlclient)) + +(define-public python-hiredis + (package + (name "python-hiredis") + (version "0.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "hiredis" version)) + (sha256 + (base32 + "1dfm2k9l9zar9nw9fwmm74zrgraxdxs04vx9li56fjcf289qx5fa")))) + (build-system python-build-system) + (arguments + ;; no tests + `(#:tests? #f)) + (home-page "https://github.com/redis/hiredis-py") + (synopsis "Python extension that wraps protocol parsing code in hiredis") + (description "Python-hiredis is a python extension that wraps protocol +parsing code in hiredis. It primarily speeds up parsing of multi bulk replies.") + (license license:bsd-3))) + +(define-public python2-hiredis + (package-with-python2 python-hiredis)) + +(define-public python-fakeredis + (package + (name "python-fakeredis") + (version "0.8.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "fakeredis" version)) + (sha256 + (base32 + "0zncahj3byyasyfx9i7k991ph0n0lq8v3a21pqri5qxn9564bk9r")))) + (build-system python-build-system) + (arguments + ;; no tests + `(#:tests? #f)) + (home-page "https://github.com/jamesls/fakeredis") + (synopsis "Fake implementation of redis API for testing purposes") + (description "Fakeredis is a pure python implementation of the redis-py +python client that simulates talking to a redis server. This was created for a +single purpose: to write unittests. Setting up redis is not hard, but many time + you want to write unittests that do not talk to an external server (such as +redis). This module now allows tests to simply use this module as a reasonable +substitute for redis.") + (license license:bsd-3))) + +(define-public python2-fakeredis + (package-with-python2 python-fakeredis)) + +(define-public python-redis + (package + (name "python-redis") + (version "2.10.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "redis" version)) + (sha256 + (base32 "0csmrkxb29x7xs9b51zplwkkq2hwnbh9jns1g85dykn5rxmaxysx")))) + (build-system python-build-system) + ;; Tests require a running Redis server + (arguments '(#:tests? #f)) + ;; As long as we are not running test, we do not need this input :-) + ;;(native-inputs + ;; `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/andymccurdy/redis-py") + (synopsis "Redis Python client") + (description + "This package provides a Python interface to the Redis key-value store.") + (license license:expat))) + +(define-public python2-redis + (package-with-python2 python-redis)) + +(define-public python-rq + (package + (name "python-rq") + (version "0.7.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rq" version)) + (sha256 + (base32 "0gaq5pnh0zy46r8jvygi0ifbvz3pq6i7xla78ijcgjw0x77qzsdh")))) + (build-system python-build-system) + (propagated-inputs + `(("python-click" ,python-click) + ("python-redis" ,python-redis))) + (home-page "http://python-rq.org/") + (synopsis "Simple job queues for Python") + (description + "RQ (Redis Queue) is a simple Python library for queueing jobs and +processing them in the background with workers. It is backed by Redis and it +is designed to have a low barrier to entry.") + (license license:bsd-2))) + +(define-public python2-rq + (package-with-python2 python-rq)) + +(define-public python-trollius-redis + (package + (name "python-trollius-redis") + (version "0.1.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "trollius_redis" version)) + (sha256 + (base32 + "0k3vypszmgmaipgw9xscvgm79h2zd6p6ci8gdp5sxl6g5kbqr9fy")))) + (build-system python-build-system) + ;; TODO: Tests require packaging 'hiredis'. + (arguments '(#:tests? #f)) + (home-page "https://github.com/benjolitz/trollius-redis") + (synopsis "Port of asyncio-redis to trollius") + (description "@code{trollius-redis} is a Redis client for Python + trollius. It is an asynchronious IO (PEP 3156) implementation of the + Redis protocol.") + (license license:bsd-2))) + +(define-public python2-trollius-redis + (package-with-python2 python-trollius-redis)) + +(define-public python-sqlparse + (package + (name "python-sqlparse") + (version "0.2.4") + (source (origin + (method url-fetch) + (uri (pypi-uri "sqlparse" version)) + (sha256 + (base32 + "1v3xh0bkfhb262dbndgzhivpnhdwavdzz8jjhx9vx0xbrx2880nf")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (zero? (system* "py.test"))))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/andialbrecht/sqlparse") + (synopsis "Non-validating SQL parser") + (description "Sqlparse is a non-validating SQL parser for Python. It +provides support for parsing, splitting and formatting SQL statements.") + (license license:bsd-3))) + +(define-public python2-sqlparse + (package-with-python2 python-sqlparse)) + +(define-public python-sql + (package + (name "python-sql") + (version "0.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-sql" version)) + (sha256 + (base32 + "0p6kaqj02vz0habmdx37zjk6hjxdfm8aw737zs059vvpr70ird87")))) + (build-system python-build-system) + (home-page "https://python-sql.tryton.org/") + (synopsis "Library to write SQL queries in a pythonic way") + (description "@code{python-sql} is a library to write SQL queries, that +transforms idiomatic python function calls to well-formed SQL queries.") + (license license:bsd-3))) + +(define-public python2-sql + (package-with-python2 python-sql)) diff --git a/gnu/packages/medical.scm b/gnu/packages/medical.scm index c0d9d597b7..3f96134a3c 100644 --- a/gnu/packages/medical.scm +++ b/gnu/packages/medical.scm @@ -22,6 +22,7 @@ #:use-module (guix download) #:use-module (guix licenses) #:use-module (guix packages) + #:use-module (gnu packages databases) #:use-module (gnu packages python) #:use-module (gnu packages qt)) diff --git a/gnu/packages/nutrition.scm b/gnu/packages/nutrition.scm index 9e0430b20a..90019f848c 100644 --- a/gnu/packages/nutrition.scm +++ b/gnu/packages/nutrition.scm @@ -23,6 +23,7 @@ #:use-module (guix download) #:use-module (guix build-system python) #:use-module (gnu packages) + #:use-module (gnu packages databases) #:use-module (gnu packages gtk) #:use-module (gnu packages glib) #:use-module (gnu packages image) diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm index 8b7bd0b8be..57938d0cfd 100644 --- a/gnu/packages/python-web.scm +++ b/gnu/packages/python-web.scm @@ -45,6 +45,7 @@ #:use-module (gnu packages) #:use-module (gnu packages check) #:use-module (gnu packages compression) + #:use-module (gnu packages databases) #:use-module (gnu packages django) #:use-module (gnu packages pkg-config) #:use-module (gnu packages python) diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index 0fa78ff568..7242f1791b 100644 --- a/gnu/packages/python.scm +++ b/gnu/packages/python.scm @@ -469,35 +469,6 @@ pidof, tty, taskset, pmap.") (define-public python2-psutil (package-with-python2 python-psutil)) -(define-public python-ccm - (package - (name "python-ccm") - (version "2.1.6") - (source - (origin - (method url-fetch) - (uri (pypi-uri "ccm" version)) - (sha256 - (base32 - "177dfxsmk3k4cih6fh6v8d91bh4nqx7ns6pc07w7m7i3cvdx3c8n")))) - (build-system python-build-system) - (propagated-inputs - `(("python-pyyaml" ,python-pyyaml) - ;; Not listed in setup.py, but used in ccmlib/node.py for full - ;; functionality - ("python-psutil" ,python-psutil) - ("python-six" ,python-six))) - (home-page "https://github.com/pcmanus/ccm") - (synopsis "Cassandra Cluster Manager for Apache Cassandra clusters on -localhost") - (description "Cassandra Cluster Manager is a development tool for testing -local Cassandra clusters. It creates, launches and removes Cassandra clusters -on localhost.") - (license license:asl2.0))) - -(define-public python2-ccm - (package-with-python2 python-ccm)) - (define-public python-pytz (package (name "python-pytz") @@ -1170,31 +1141,6 @@ get the local timezone information, unless you know the zoneinfo name, and under several distributions that's hard or impossible to figure out.") (license license:cc0))) -(define-public python2-pysqlite - (package - (name "python2-pysqlite") - (version "2.8.3") - (source - (origin - (method url-fetch) - (uri (pypi-uri "pysqlite" version)) - (sha256 - (base32 - "1424gwq9sil2ffmnizk60q36vydkv8rxs6m7xs987kz8cdc37lqp")))) - (build-system python-build-system) - (inputs - `(("sqlite" ,sqlite))) - (arguments - `(#:python ,python-2 ; incompatible with Python 3 - #:tests? #f)) ; no test target - (home-page "https://github.com/ghaering/pysqlite") - (synopsis "SQLite bindings for Python") - (description - "Pysqlite provides SQLite bindings for Python that comply to the -Database API 2.0T.") - (license license:zlib))) - - (define-public python2-mechanize (package (name "python2-mechanize") @@ -2675,56 +2621,6 @@ and is very extensible.") (define-public python2-scikit-image (package-with-python2 python-scikit-image)) -(define-public python-redis - (package - (name "python-redis") - (version "2.10.5") - (source - (origin - (method url-fetch) - (uri (pypi-uri "redis" version)) - (sha256 - (base32 "0csmrkxb29x7xs9b51zplwkkq2hwnbh9jns1g85dykn5rxmaxysx")))) - (build-system python-build-system) - ;; Tests require a running Redis server - (arguments '(#:tests? #f)) - ;; As long as we are not running test, we do not need this input :-) - ;;(native-inputs - ;; `(("python-pytest" ,python-pytest))) - (home-page "https://github.com/andymccurdy/redis-py") - (synopsis "Redis Python client") - (description - "This package provides a Python interface to the Redis key-value store.") - (license license:expat))) - -(define-public python2-redis - (package-with-python2 python-redis)) - -(define-public python-rq - (package - (name "python-rq") - (version "0.7.1") - (source - (origin - (method url-fetch) - (uri (pypi-uri "rq" version)) - (sha256 - (base32 "0gaq5pnh0zy46r8jvygi0ifbvz3pq6i7xla78ijcgjw0x77qzsdh")))) - (build-system python-build-system) - (propagated-inputs - `(("python-click" ,python-click) - ("python-redis" ,python-redis))) - (home-page "http://python-rq.org/") - (synopsis "Simple job queues for Python") - (description - "RQ (Redis Queue) is a simple Python library for queueing jobs and -processing them in the background with workers. It is backed by Redis and it -is designed to have a low barrier to entry.") - (license license:bsd-2))) - -(define-public python2-rq - (package-with-python2 python-rq)) - (define-public python-cython (package (name "python-cython") @@ -3713,41 +3609,6 @@ as the original project seems to have been abandoned circa 2007.") (define-public python2-socksipy-branch (package-with-python2 python-socksipy-branch)) -(define-public python-sqlalchemy - (package - (name "python-sqlalchemy") - (version "1.0.12") - (source - (origin - (method url-fetch) - (uri (string-append "https://pypi.python.org/packages/source/S/" - "SQLAlchemy/SQLAlchemy-" version ".tar.gz")) - (sha256 - (base32 - "1l8qclhd0s90w3pvwhi5mjxdwr5j7gw7cjka2fx6f2vqmq7f4yb6")))) - (build-system python-build-system) - (native-inputs - `(("python-cython" ,python-cython) ;for c extensions - ("python-pytest" ,python-pytest) - ("python-mock" ,python-mock))) ;for tests - (arguments - `(#:phases - (modify-phases %standard-phases - (replace 'check - (lambda _ (zero? (system* "py.test"))))))) - (home-page "http://www.sqlalchemy.org") - (synopsis "Database abstraction library") - (description - "SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that -gives application developers the full power and flexibility of SQL. It -provides a full suite of well known enterprise-level persistence patterns, -designed for efficient and high-performing database access, adapted into a -simple and Pythonic domain language.") - (license license:x11))) - -(define-public python2-sqlalchemy - (package-with-python2 python-sqlalchemy)) - (define-public python-pycodestyle (package (name "python-pycodestyle") @@ -3835,87 +3696,6 @@ retried.") (define-public python2-flaky (package-with-python2 python-flaky)) -(define-public python-sqlalchemy-utils - (package - (name "python-sqlalchemy-utils") - (version "0.32.13") - (source - (origin - (method url-fetch) - (uri (pypi-uri "SQLAlchemy-Utils" version)) - (sha256 - (base32 - "0vsib7gidjamzsz6w4s5pdhxzxsrkghjnm4sqwk94igjrl3i5ixj")))) - (build-system python-build-system) - (arguments - '(#:tests? #f)) ; FIXME: Many tests require a running database server. - ;; #:phases - ;; (modify-phases %standard-phases - ;; (replace 'check - ;; (lambda _ - ;; (zero? (system* "py.test" "sqlalchemy_utils" "tests"))))) - (propagated-inputs - `(("python-six" ,python-six) - ("python-sqlalchemy" ,python-sqlalchemy))) - (native-inputs - `(("python-dateutil" ,python-dateutil) - ("python-flexmock" ,python-flexmock) - ("python-psycopg2" ,python-psycopg2) - ("python-pytest" ,python-pytest) - ("python-pytz" ,python-pytz))) - (home-page "https://github.com/kvesteri/sqlalchemy-utils") - (synopsis "Various utility functions for SQLAlchemy") - (description - "SQLAlchemy-utils provides various utility functions and custom data types -for SQLAlchemy. SQLAlchemy is an SQL database abstraction library for Python. - -You might also want to install the following optional dependencies: -@enumerate -@item @code{python-passlib} -@item @code{python-babel} -@item @code{python-cryptography} -@item @code{python-pytz} -@item @code{python-psycopg2} -@item @code{python-furl} -@item @code{python-flask-babel} -@end enumerate -") - (license license:bsd-3))) - -(define-public python2-sqlalchemy-utils - (package-with-python2 python-sqlalchemy-utils)) - -(define-public python-alembic - (package - (name "python-alembic") - (version "0.9.5") - (source - (origin - (method url-fetch) - (uri (pypi-uri "alembic" version)) - (sha256 - (base32 - "01gx2syqbaxh4hr9pf7pxhlb6p36qaf99140dy19lsx1paxb9p4b")))) - (build-system python-build-system) - (native-inputs - `(("python-mock" ,python-mock) - ("python-pytest-cov" ,python-pytest-cov))) - (propagated-inputs - `(("python-dateutil" ,python-dateutil) - ("python-sqlalchemy" ,python-sqlalchemy) - ("python-mako" ,python-mako) - ("python-editor" ,python-editor))) - (home-page "http://bitbucket.org/zzzeek/alembic") - (synopsis - "Database migration tool for SQLAlchemy") - (description - "Alembic is a lightweight database migration tool for usage with the -SQLAlchemy Database Toolkit for Python.") - (license license:expat))) - -(define-public python2-alembic - (package-with-python2 python-alembic)) - (define-public python-autopep8 (package (name "python-autopep8") @@ -4475,35 +4255,6 @@ common operations on files to be invoked on those path objects directly.") (define-public python2-pathpy (package-with-python2 python-pathpy)) -(define-public python-pickleshare - (package - (name "python-pickleshare") - (version "0.5") - (source - (origin - (method url-fetch) - (uri (string-append "https://pypi.python.org/packages/source/p/" - "pickleshare/pickleshare-" version ".tar.gz")) - (sha256 - (base32 "11ljr90j3p6qswdrbl7p4cjb2i93f6vn0vx9anzpshsx0d2mggn0")))) - (build-system python-build-system) - (propagated-inputs - `(("python-pathpy" ,python-pathpy))) - (home-page "https://github.com/vivainio/pickleshare") - (synopsis "Tiny key value database with concurrency support") - (description - "PickleShare is a small ‘shelve’-like datastore with concurrency support. -Like shelve, a PickleShareDB object acts like a normal dictionary. Unlike -shelve, many processes can access the database simultaneously. Changing a -value in database is immediately visible to other processes accessing the same -database. Concurrency is possible because the values are stored in separate -files. Hence the “database” is a directory where all files are governed by -PickleShare.") - (license license:expat))) - -(define-public python2-pickleshare - (package-with-python2 python-pickleshare)) - (define-public python-simplegeneric (package (name "python-simplegeneric") @@ -4988,49 +4739,6 @@ implementation of D-Bus.") ;; "ValueError: unichr() arg not in range(0x10000) (narrow Python build)" (arguments `(#:tests? #f)))) -(define-public python-apsw - (package - (name "python-apsw") - (version "3.9.2-r1") - (source - (origin - (method url-fetch) - (uri (pypi-uri "apsw" version)) - (sha256 - (base32 - "0w4jb0wpx785qw42r3h4fh7gl5w2968q48i7gygybsfxck8nzffs")))) - (build-system python-build-system) - (inputs - `(("sqlite" ,sqlite))) - (arguments - `(#:phases - (modify-phases %standard-phases - (replace 'build - (lambda _ - (zero? - (system* "python" "setup.py" "build" "--enable-all-extensions")))) - (add-after 'build 'build-test-helper - (lambda _ - (zero? - (system - (string-append "gcc -fPIC -shared -o ./testextension.sqlext " - "-I. -Isqlite3 src/testextension.c") )))) - (delete 'check) - (add-after 'install 'check - (lambda* (#:key inputs outputs #:allow-other-keys) - (add-installed-pythonpath inputs outputs) - (zero? (system* "python" "setup.py" "test"))))))) - (home-page "https://github.com/rogerbinns/apsw/") - (synopsis "Another Python SQLite Wrapper") - (description "APSW is a Python wrapper for the SQLite -embedded relational database engine. In contrast to other wrappers such as -pysqlite it focuses on being a minimal layer over SQLite attempting just to -translate the complete SQLite API into Python.") - (license license:zlib))) - -(define-public python2-apsw - (package-with-python2 python-apsw)) - (define-public python-lxml (package (name "python-lxml") @@ -6085,48 +5793,6 @@ and MAC network addresses.") (define-public python2-netaddr (package-with-python2 python-netaddr)) -(define-public python2-neo4j-driver - (package - (name "python2-neo4j-driver") - ;; NOTE: When upgrading to 1.5.0, please add a python3 variant. - (version "1.4.0") - (source (origin - (method url-fetch) - (uri (pypi-uri "neo4j-driver" version)) - (sha256 - (base32 - "011r1vh182p8mm83d8dz9rfnc3l7rf7fd00cyrbyfzi71jmc4g98")))) - (build-system python-build-system) - (arguments - `(#:python ,python-2)) - (home-page "https://neo4j.com/developer/python/") - (synopsis "Neo4j driver code written in Python") - (description "This package provides the Neo4j Python driver that connects -to the database using Neo4j's binary protocol. It aims to be minimal, while -being idiomatic to Python.") - (license license:asl2.0))) - -(define-public python2-py2neo - (package - (name "python2-py2neo") - (version "3.1.2") - (source (origin - (method url-fetch) - (uri (pypi-uri "py2neo" version)) - (sha256 - (base32 - "1f1q95vqcvlc3nsc33p841swnjdcjazddlq2dzi3qfnjqjrajxw1")))) - (build-system python-build-system) - (arguments - `(#:python ,python-2)) - (home-page "http://py2neo.org") - (synopsis "Library and toolkit for working with Neo4j in Python") - (description "This package provides a client library and toolkit for -working with Neo4j from within Python applications and from the command -line. The core library has no external dependencies and has been carefully -designed to be easy and intuitive to use.") - (license license:asl2.0))) - (define-public python-wrapt (package (name "python-wrapt") @@ -7378,30 +7044,6 @@ minimal and fast API targeting the following uses: (define-public python2-execnet (package-with-python2 python-execnet)) -(define-public python-trollius-redis - (package - (name "python-trollius-redis") - (version "0.1.4") - (source - (origin - (method url-fetch) - (uri (pypi-uri "trollius_redis" version)) - (sha256 - (base32 - "0k3vypszmgmaipgw9xscvgm79h2zd6p6ci8gdp5sxl6g5kbqr9fy")))) - (build-system python-build-system) - ;; TODO: Tests require packaging 'hiredis'. - (arguments '(#:tests? #f)) - (home-page "https://github.com/benjolitz/trollius-redis") - (synopsis "Port of asyncio-redis to trollius") - (description "@code{trollius-redis} is a Redis client for Python - trollius. It is an asynchronious IO (PEP 3156) implementation of the - Redis protocol.") - (license license:bsd-2))) - -(define-public python2-trollius-redis - (package-with-python2 python-trollius-redis)) - (define-public python-icalendar (package (name "python-icalendar") @@ -8273,33 +7915,6 @@ introspection of @code{zope.interface} instances in code.") (define-public python2-sphinx-repoze-autointerface (package-with-python2 python-sphinx-repoze-autointerface)) -(define-public python-psycopg2 - (package - (name "python-psycopg2") - (version "2.7.3.1") - (source - (origin - (method url-fetch) - (uri (pypi-uri "psycopg2" version)) - (sha256 - (base32 - "0rda1j02ds6s28752fhmpwg761sh6jsxi1gpczqkrd28cki1cywv")))) - (build-system python-build-system) - (arguments - ;; Tests would require a postgresql database "psycopg2_test" - ;; and a running postgresql database management service. - `(#:tests? #f)) ; TODO re-enable after providing a test-db. - (inputs - `(("postgresql" ,postgresql))) ; libpq - (home-page "http://initd.org/psycopg/") - (synopsis "Python PostgreSQL adapter") - (description - "psycopg2 is a thread-safe PostgreSQL adapter that implements DB-API 2.0. ") - (license license:lgpl3+))) - -(define-public python2-psycopg2 - (package-with-python2 python-psycopg2)) - (define-public python-vobject (package (name "python-vobject") @@ -8934,33 +8549,6 @@ multiple processes (imagine multiprocessing, billiard, futures, celery etc). (define-public python2-tblib (package-with-python2 python-tblib)) -(define-public python-sqlparse - (package - (name "python-sqlparse") - (version "0.2.4") - (source (origin - (method url-fetch) - (uri (pypi-uri "sqlparse" version)) - (sha256 - (base32 - "1v3xh0bkfhb262dbndgzhivpnhdwavdzz8jjhx9vx0xbrx2880nf")))) - (build-system python-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (replace 'check - (lambda _ (zero? (system* "py.test"))))))) - (native-inputs - `(("python-pytest" ,python-pytest))) - (home-page "https://github.com/andialbrecht/sqlparse") - (synopsis "Non-validating SQL parser") - (description "Sqlparse is a non-validating SQL parser for Python. It -provides support for parsing, splitting and formatting SQL statements.") - (license license:bsd-3))) - -(define-public python2-sqlparse - (package-with-python2 python-sqlparse)) - (define-public python-greenlet (package (name "python-greenlet") @@ -10537,32 +10125,6 @@ PNG, JPEG, JPEG2000 and GIF files in pure Python.") (description "This package provides console text coloring for Python.") (license license:bsd-3))) -(define-public python-sadisplay - (package - (name "python-sadisplay") - (version "0.4.6") - (source - (origin - (method url-fetch) - (uri (pypi-uri "sadisplay" version)) - (sha256 - (base32 - "0zqad2fl7q26p090qmqgmxbm6iwgf9zij1w8da1g3wdgjj72ql05")))) - (build-system python-build-system) - (propagated-inputs - `(("python-sqlalchemy" ,python-sqlalchemy))) - (native-inputs - `(("python-nose" ,python-nose))) - (home-page "https://bitbucket.org/estin/sadisplay") - (synopsis "SQLAlchemy schema displayer") - (description "This package provides a program to build Entity -Relationship diagrams from a SQLAlchemy model (or directly from the -database).") - (license license:bsd-3))) - -(define-public python2-sadisplay - (package-with-python2 python-sadisplay)) - (define-public python-argcomplete (package (name "python-argcomplete") @@ -11693,93 +11255,6 @@ several utilities, as well as an API for building localization tools.") (define-public python2-translate-toolkit (package-with-python2 python-translate-toolkit)) -(define-public python-mysqlclient - (package - (name "python-mysqlclient") - (version "1.3.10") - (source - (origin - (method url-fetch) - (uri (pypi-uri "mysqlclient" version)) - (sha256 - (base32 - "0qkj570x4rbsblji6frvsvp2v1ap32dqzj1lq62zp9515ffsyaj5")))) - (build-system python-build-system) - (native-inputs - `(("mariadb" ,mariadb) - ("nose" ,python-nose) - ("mock" ,python-mock) - ("py.test" ,python-pytest))) - (inputs - `(("mysql" ,mysql) - ("libz" ,zlib) - ("openssl" ,openssl))) - (home-page "https://github.com/PyMySQL/mysqlclient-python") - (synopsis "MySQLdb is an interface to the popular MySQL database server for Python") - (description "MySQLdb is an interface to the popular MySQL database server -for Python. The design goals are: -@enumerate -@item Compliance with Python database API version 2.0 [PEP-0249], -@item Thread-safety, -@item Thread-friendliness (threads will not block each other). -@end enumerate") - (license license:gpl2))) - -(define-public python2-mysqlclient - (package-with-python2 python-mysqlclient)) - -(define-public python-hiredis - (package - (name "python-hiredis") - (version "0.2.0") - (source - (origin - (method url-fetch) - (uri (pypi-uri "hiredis" version)) - (sha256 - (base32 - "1dfm2k9l9zar9nw9fwmm74zrgraxdxs04vx9li56fjcf289qx5fa")))) - (build-system python-build-system) - (arguments - ;; no tests - `(#:tests? #f)) - (home-page "https://github.com/redis/hiredis-py") - (synopsis "Python extension that wraps protocol parsing code in hiredis") - (description "Python-hiredis is a python extension that wraps protocol -parsing code in hiredis. It primarily speeds up parsing of multi bulk replies.") - (license license:bsd-3))) - -(define-public python2-hiredis - (package-with-python2 python-hiredis)) - -(define-public python-fakeredis - (package - (name "python-fakeredis") - (version "0.8.2") - (source - (origin - (method url-fetch) - (uri (pypi-uri "fakeredis" version)) - (sha256 - (base32 - "0zncahj3byyasyfx9i7k991ph0n0lq8v3a21pqri5qxn9564bk9r")))) - (build-system python-build-system) - (arguments - ;; no tests - `(#:tests? #f)) - (home-page "https://github.com/jamesls/fakeredis") - (synopsis "Fake implementation of redis API for testing purposes") - (description "Fakeredis is a pure python implementation of the redis-py -python client that simulates talking to a redis server. This was created for a -single purpose: to write unittests. Setting up redis is not hard, but many time - you want to write unittests that do not talk to an external server (such as -redis). This module now allows tests to simply use this module as a reasonable -substitute for redis.") - (license license:bsd-3))) - -(define-public python2-fakeredis - (package-with-python2 python-fakeredis)) - (define-public python-packaging (package (name "python-packaging") @@ -11812,27 +11287,6 @@ information.") (define-public python2-packaging (package-with-python2 python-packaging)) -(define-public python-sql - (package - (name "python-sql") - (version "0.9") - (source - (origin - (method url-fetch) - (uri (pypi-uri "python-sql" version)) - (sha256 - (base32 - "0p6kaqj02vz0habmdx37zjk6hjxdfm8aw737zs059vvpr70ird87")))) - (build-system python-build-system) - (home-page "https://python-sql.tryton.org/") - (synopsis "Library to write SQL queries in a pythonic way") - (description "@code{python-sql} is a library to write SQL queries, that -transforms idiomatic python function calls to well-formed SQL queries.") - (license license:bsd-3))) - -(define-public python2-sql - (package-with-python2 python-sql)) - (define-public python-relatorio (package (name "python-relatorio") diff --git a/gnu/packages/tryton.scm b/gnu/packages/tryton.scm index 33d01f058d..2e669510e6 100644 --- a/gnu/packages/tryton.scm +++ b/gnu/packages/tryton.scm @@ -20,6 +20,7 @@ #:use-module ((guix licenses) #:prefix license:) #:use-module (gnu packages) #:use-module (gnu packages check) + #:use-module (gnu packages databases) #:use-module (gnu packages gtk) #:use-module (gnu packages python) #:use-module (gnu packages python-web) |