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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-09-15 20:57:38 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-09-15 20:58:25 +0200 |
| commit | 15184fb386d9b71b122e40f665d2f42bf4a13ddc (patch) | |
| tree | 25d8b2d7734cea5deda6d4700309f6eb939bd883 /gnu | |
| parent | 83b420912289b0f2b2caba9fc8d0eb22256722ad (diff) | |
| download | patches-15184fb386d9b71b122e40f665d2f42bf4a13ddc.tar patches-15184fb386d9b71b122e40f665d2f42bf4a13ddc.tar.gz | |
gnu: Add r-reportingtools.
* gnu/packages/bioconductor.scm (r-reportingtools): New variable.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 48 |
1 files changed, 48 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 3c01e2d0d4..d382ce1dfc 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1151,6 +1151,54 @@ customizable permutation tests to assess the association between genomic region sets and other genomic features.") (license license:artistic2.0))) +(define-public r-reportingtools + (package + (name "r-reportingtools") + (version "2.24.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "ReportingTools" version)) + (sha256 + (base32 + "16ska7mlacka0xi8x2icy8v42vaxccb3a1x73szmfvcrwr592qsc")))) + (properties + `((upstream-name . "ReportingTools"))) + (build-system r-build-system) + (propagated-inputs + `(("r-annotate" ,r-annotate) + ("r-annotationdbi" ,r-annotationdbi) + ("r-biobase" ,r-biobase) + ("r-biocgenerics" ,r-biocgenerics) + ("r-category" ,r-category) + ("r-deseq2" ,r-deseq2) + ("r-edger" ,r-edger) + ("r-ggbio" ,r-ggbio) + ("r-ggplot2" ,r-ggplot2) + ("r-gostats" ,r-gostats) + ("r-gseabase" ,r-gseabase) + ("r-hwriter" ,r-hwriter) + ("r-iranges" ,r-iranges) + ("r-knitr" ,r-knitr) + ("r-lattice" ,r-lattice) + ("r-limma" ,r-limma) + ("r-pfam-db" ,r-pfam-db) + ("r-r-utils" ,r-r-utils) + ("r-xml" ,r-xml))) + (home-page "https://bioconductor.org/packages/ReportingTools/") + (synopsis "Tools for making reports in various formats") + (description + "The ReportingTools package enables users to easily display reports of +analysis results generated from sources such as microarray and sequencing +data. The package allows users to create HTML pages that may be viewed on a +web browser, or in other formats. Users can generate tables with sortable and +filterable columns, make and display plots, and link table entries to other +data sources such as NCBI or larger plots within the HTML page. Using the +package, users can also produce a table of contents page to link various +reports together for a particular project that can be viewed in a web +browser.") + (license license:artistic2.0))) + (define-public r-geneplotter (package (name "r-geneplotter") |