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| author | Ricardo Wurmus <rekado@elephly.net> | 2017-07-02 15:05:28 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2017-07-09 17:07:27 +0200 |
| commit | fed7200862ef33cc203e4c08a8b264318bada0fd (patch) | |
| tree | 18102834159c44f04a6cc7ac6064f433e95a0e5f /gnu | |
| parent | eb2200f3bd6d087593abfaf181941c36e08fbc43 (diff) | |
| download | patches-fed7200862ef33cc203e4c08a8b264318bada0fd.tar patches-fed7200862ef33cc203e4c08a8b264318bada0fd.tar.gz | |
gnu: deeptools: Update to 2.5.1.
* gnu/packages/bioinformatics.scm (deeptools): Update to 2.5.1.
[arguments]: Remove.
[native-inputs]: Use "python-" instead of "python2-" variants.
[inputs]: Likewise; add python-py2bit.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 26 |
1 files changed, 12 insertions, 14 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index d2675428c9..82cd1e420d 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2080,7 +2080,7 @@ with Python.") (define-public deeptools (package (name "deeptools") - (version "2.1.1") + (version "2.5.1") (source (origin (method url-fetch) (uri (string-append "https://github.com/fidelram/deepTools/" @@ -2088,22 +2088,20 @@ with Python.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "1nmfin0zjdby3vay3r4flvz94dr6qjhj41ax4yz3vx13j6wz8izd")))) + "1q8i12l2gvk4n2s8lhyzwhh9g4qbc8lrk5l7maz00yvd5g6z5540")))) (build-system python-build-system) - (arguments - `(#:python ,python-2)) (inputs - `(("python-scipy" ,python2-scipy) - ("python-numpy" ,python2-numpy) - ("python-numpydoc" ,python2-numpydoc) - ("python-matplotlib" ,python2-matplotlib) - ("python-bx-python" ,python2-bx-python) - ("python-pysam" ,python2-pysam) - ("python-pybigwig" ,python2-pybigwig))) + `(("python-scipy" ,python-scipy) + ("python-numpy" ,python-numpy) + ("python-numpydoc" ,python-numpydoc) + ("python-matplotlib" ,python-matplotlib) + ("python-pysam" ,python-pysam) + ("python-py2bit" ,python-py2bit) + ("python-pybigwig" ,python-pybigwig))) (native-inputs - `(("python-mock" ,python2-mock) ;for tests - ("python-nose" ,python2-nose) ;for tests - ("python-pytz" ,python2-pytz))) ;for tests + `(("python-mock" ,python-mock) ;for tests + ("python-nose" ,python-nose) ;for tests + ("python-pytz" ,python-pytz))) ;for tests (home-page "https://github.com/fidelram/deepTools") (synopsis "Tools for normalizing and visualizing deep-sequencing data") (description |