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| author | Ben Woodcroft <donttrustben@gmail.com> | 2017-03-30 16:02:08 +1000 |
|---|---|---|
| committer | Ben Woodcroft <donttrustben@gmail.com> | 2017-04-02 10:14:17 +1000 |
| commit | cf1d581464645b3f96ead827010f84ef7d714506 (patch) | |
| tree | ca236376093078d5145d13f68084797383636f06 /gnu | |
| parent | 4fbed7494d782f1a1ee027e1a3a2d2e4b12a53ab (diff) | |
| download | patches-cf1d581464645b3f96ead827010f84ef7d714506.tar patches-cf1d581464645b3f96ead827010f84ef7d714506.tar.gz | |
gnu: khmer: Build with gcc-4.
* gnu/packages/bioinformatics.scm (khmer)[inputs]: Add gcc-4.9.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 5 |
1 files changed, 4 insertions, 1 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 3c0366814b..7c21586fcf 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -3150,7 +3150,10 @@ command, or queried for specific k-mers with @code{jellyfish query}.") `(("zlib" ,zlib) ("bzip2" ,bzip2) ("python-screed" ,python-screed) - ("python-bz2file" ,python-bz2file))) + ("python-bz2file" ,python-bz2file) + ;; Tests fail when gcc-5 is used for compilation. Use gcc-4.9 at least + ;; until the next version of khmer (likely 2.1) is released. + ("gcc" ,gcc-4.9))) (home-page "https://khmer.readthedocs.org/") (synopsis "K-mer counting, filtering and graph traversal library") (description "The khmer software is a set of command-line tools for |