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| author | Ricardo Wurmus <rekado@elephly.net> | 2018-10-04 21:34:16 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2018-10-05 09:21:54 +0200 |
| commit | 8e72f0f3190443935c03264037c83099ed68445f (patch) | |
| tree | 51e31c5b7fa487145fd2e83873dc863987da9e69 /gnu | |
| parent | 939882f73430ae7644b3c7913cb389cf00c234e0 (diff) | |
| download | patches-8e72f0f3190443935c03264037c83099ed68445f.tar patches-8e72f0f3190443935c03264037c83099ed68445f.tar.gz | |
gnu: deeptools: Update to 3.1.2.
* gnu/packages/bioinformatics.scm (deeptools): Update to 3.1.2.
[source]: Fetch from git.
[arguments]: Delete reset-gzip-timestamps phase.
[inputs]: Add python-plotly.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 21 |
1 files changed, 14 insertions, 7 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 4c1739f1b1..39c84bf4c8 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2006,18 +2006,25 @@ with Python.") (define-public deeptools (package (name "deeptools") - (version "2.5.1") + (version "3.1.2") (source (origin - (method url-fetch) - (uri (string-append "https://github.com/deeptools/deepTools/" - "archive/" version ".tar.gz")) - (file-name (string-append name "-" version ".tar.gz")) + (method git-fetch) + (uri (git-reference + (url "https://github.com/deeptools/deepTools.git") + (commit version))) + (file-name (git-file-name name version)) (sha256 (base32 - "1q8i12l2gvk4n2s8lhyzwhh9g4qbc8lrk5l7maz00yvd5g6z5540")))) + "06fdpp6cg3xiwryxjhixvfysl4z0ps1crjgia587qa9ikqpsa7fd")))) (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + ;; This phase fails, but it's not needed. + (delete 'reset-gzip-timestamps)))) (inputs - `(("python-scipy" ,python-scipy) + `(("python-plotly" ,python-plotly) + ("python-scipy" ,python-scipy) ("python-numpy" ,python-numpy) ("python-numpydoc" ,python-numpydoc) ("python-matplotlib" ,python-matplotlib) |