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authorRicardo Wurmus <rekado@elephly.net>2018-06-02 13:42:05 +0200
committerRicardo Wurmus <rekado@elephly.net>2018-06-02 13:42:05 +0200
commit92963798a6b81989c52bc199ef224605d9b90063 (patch)
tree756afd216b726d55b5a89604ad1d95b9e0a00650 /gnu
parent41f17554d88795bf35fbfc3e05301a6d2f64cca0 (diff)
downloadpatches-92963798a6b81989c52bc199ef224605d9b90063.tar
patches-92963798a6b81989c52bc199ef224605d9b90063.tar.gz
gnu: r-scater: Update to 1.8.0.
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.8.0. [propagated-inputs]: Add r-delayedarray ad r-delayedmatrixstats; remove r-matrixstats and r-biomart.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioinformatics.scm8
1 files changed, 4 insertions, 4 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index e9477501b3..2445991746 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10844,27 +10844,27 @@ libraries.")
(define-public r-scater
(package
(name "r-scater")
- (version "1.6.3")
+ (version "1.8.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "scater" version))
(sha256
(base32
- "0q3s96gf8saa1dq2fvmpl0jyj7bx3wrdfck3hanb8pxkcir2p7dn"))))
+ "0bhpikgz3b9f510dawsay4zry9rlp8vjx5n6zvwbcpwrd94p3903"))))
(build-system r-build-system)
(propagated-inputs
`(("r-beachmat" ,r-beachmat)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
- ("r-biomart" ,r-biomart)
("r-data-table" ,r-data-table)
+ ("r-delayedarray" ,r-delayedarray)
+ ("r-delayedmatrixstats" ,r-delayedmatrixstats)
("r-dplyr" ,r-dplyr)
("r-edger" ,r-edger)
("r-ggbeeswarm" ,r-ggbeeswarm)
("r-ggplot2" ,r-ggplot2)
("r-limma" ,r-limma)
("r-matrix" ,r-matrix)
- ("r-matrixstats" ,r-matrixstats)
("r-plyr" ,r-plyr)
("r-rcpp" ,r-rcpp)
("r-reshape2" ,r-reshape2)