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| author | Ricardo Wurmus <rekado@elephly.net> | 2017-11-07 15:47:14 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2017-11-07 23:32:43 +0100 |
| commit | b52a866d149112134fa4c314968a795fe73533b1 (patch) | |
| tree | 2c41ec56a6eac84d2184a9364bfabe8f475e258d /gnu | |
| parent | dd5fc8b78ec5e1bcef35eae409c8faa9b88b6aa3 (diff) | |
| download | patches-b52a866d149112134fa4c314968a795fe73533b1.tar patches-b52a866d149112134fa4c314968a795fe73533b1.tar.gz | |
gnu: Add r-org-hs-eg-db.
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): New variable.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a08f06ada7..b58764c6c9 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -9854,6 +9854,33 @@ and more.") the earlier snpMatrix package, allowing for uncertainty in genotypes.") (license license:gpl3))) +(define-public r-org-hs-eg-db + (package + (name "r-org-hs-eg-db") + (version "3.4.2") + (source (origin + (method url-fetch) + ;; We cannot use bioconductor-uri here because this tarball is + ;; located under "data/annotation/" instead of "bioc/". + (uri (string-append "http://www.bioconductor.org/packages/" + "release/data/annotation/src/contrib/" + "org.Hs.eg.db_" + version ".tar.gz")) + (sha256 + (base32 + "0izzmas99j64sc4x8pxi09xw0ra1941kjrsl8sjxl0cjw1d2b32z")))) + (properties + `((upstream-name . "org.Hs.eg.db"))) + (build-system r-build-system) + (propagated-inputs + `(("r-annotationdbi" ,r-annotationdbi))) + (home-page "https://bioconductor.org/packages/org.Hs.eg.db/") + (synopsis "Genome-wide annotation for Human") + (description + "This package contains genome-wide annotations for Human, primarily based +on mapping using Entrez Gene identifiers.") + (license license:artistic2.0))) + (define-public r-qvalue (package (name "r-qvalue") |