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| author | Ben Woodcroft <donttrustben@gmail.com> | 2017-08-31 12:37:05 +0800 |
|---|---|---|
| committer | Ben Woodcroft <donttrustben@gmail.com> | 2017-08-31 12:37:05 +0800 |
| commit | 0691851a64382090c6deb30b967217725bdaaad6 (patch) | |
| tree | 863829e274ae2b949a0cf5f71ff94fe54d75beb5 /gnu | |
| parent | c959e5a1dc266325b2e4986a18bd98d1e37900ac (diff) | |
| download | patches-0691851a64382090c6deb30b967217725bdaaad6.tar patches-0691851a64382090c6deb30b967217725bdaaad6.tar.gz | |
gnu: bioinformatics: Work around more "dotless @INC" build failures.
* gnu/packages/bioinformatics.scm (ncbi-vdb, sra-tools)[arguments]: Add
'set-perl-search-path' phase.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 14 |
1 files changed, 14 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index e3729537bb..70418cd977 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -4751,6 +4751,13 @@ simultaneously.") #:tests? #f ; no "check" target #:phases (modify-phases %standard-phases + (add-before 'configure 'set-perl-search-path + (lambda _ + ;; Work around "dotless @INC" build failure. + (setenv "PERL5LIB" + (string-append (getcwd) "/setup:" + (getenv "PERL5LIB"))) + #t)) (replace 'configure (lambda* (#:key inputs outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) @@ -5056,6 +5063,13 @@ sequence itself can be retrieved from these databases.") "/lib32"))) #:phases (modify-phases %standard-phases + (add-before 'configure 'set-perl-search-path + (lambda _ + ;; Work around "dotless @INC" build failure. + (setenv "PERL5LIB" + (string-append (getcwd) "/setup:" + (getenv "PERL5LIB"))) + #t)) (replace 'configure (lambda* (#:key inputs outputs #:allow-other-keys) ;; The build system expects a directory containing the sources and |