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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-10-14 17:58:20 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-10-14 18:09:37 +0200 |
| commit | 40be965e28062ab37ab7c7ed6647600fa8671ed0 (patch) | |
| tree | ec6fde4531535d1fd7f39538d9996b82dd7d4a79 /gnu | |
| parent | 14db074e288a67017828415fcd553e96ba6cf00d (diff) | |
| download | patches-40be965e28062ab37ab7c7ed6647600fa8671ed0.tar patches-40be965e28062ab37ab7c7ed6647600fa8671ed0.tar.gz | |
gnu: Add r-phastcons100way-ucsc-hg19.
* gnu/packages/bioconductor.scm (r-phastcons100way-ucsc-hg19): New variable.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 7b0405427c..bb28493935 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -832,6 +832,36 @@ Disease Ontology.") using data from public repositories.") (license license:artistic2.0))) +(define-public r-phastcons100way-ucsc-hg19 + (package + (name "r-phastcons100way-ucsc-hg19") + (version "3.7.2") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "phastCons100way.UCSC.hg19" + version 'annotation)) + (sha256 + (base32 + "1jmc4k4zgkx5vr2plnidnd9bidlwlb0kr7mjg60cqjw7dq7jl1fa")))) + (properties + `((upstream-name . "phastCons100way.UCSC.hg19"))) + (build-system r-build-system) + (propagated-inputs + `(("r-bsgenome" ,r-bsgenome) + ("r-genomeinfodb" ,r-genomeinfodb) + ("r-genomicranges" ,r-genomicranges) + ("r-genomicscores" ,r-genomicscores) + ("r-iranges" ,r-iranges) + ("r-s4vectors" ,r-s4vectors))) + (home-page "https://bioconductor.org/packages/phastCons100way.UCSC.hg19") + (synopsis "UCSC phastCons conservation scores for hg19") + (description + "This package provides UCSC phastCons conservation scores for the human +genome (hg19) calculated from multiple alignments with other 99 vertebrate +species.") + (license license:artistic2.0))) + ;;; Experiment data |