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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-12-18 15:25:23 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-12-18 15:29:08 +0100 |
| commit | 4d12c1e335e3949c451b045a1f128200432fdde9 (patch) | |
| tree | 7422a2c6b5f4a81d68d9bec382713cdd64886713 /gnu | |
| parent | c2b36a044140a2f1a186b85002e5c8ed98163a25 (diff) | |
| download | patches-4d12c1e335e3949c451b045a1f128200432fdde9.tar patches-4d12c1e335e3949c451b045a1f128200432fdde9.tar.gz | |
gnu: Add r-biocor.
* gnu/packages/bioconductor.scm (r-biocor): New variable.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 2bc453dcaa..62ec80397c 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -7247,3 +7247,30 @@ rownames.") "The purpose of this package is to provide a central interface to various tools for genome-scale analysis of cancer studies.") (license license:artistic2.0))) + +(define-public r-biocor + (package + (name "r-biocor") + (version "1.10.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "BioCor" version)) + (sha256 + (base32 + "1bjw02rwmz2d715sgpfp08njb15200ch7cmipsf9hd5835ppg1jl")))) + (properties `((upstream-name . "BioCor"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocparallel" ,r-biocparallel) + ("r-gseabase" ,r-gseabase) + ("r-matrix" ,r-matrix))) + (home-page "https://llrs.github.io/BioCor/") + (synopsis "Functional similarities") + (description + "This package provides tools to calculate functional similarities based +on the pathways described on KEGG and REACTOME or in gene sets. These +similarities can be calculated for pathways or gene sets, genes, or clusters +and combined with other similarities. They can be used to improve networks, +gene selection, testing relationships, and so on.") + (license license:expat))) |