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authorRicardo Wurmus <rekado@elephly.net>2019-06-14 17:26:27 +0200
committerRicardo Wurmus <rekado@elephly.net>2019-06-14 17:32:04 +0200
commitbc70516bbae8a6388f3ed19008d3e10efd1577a7 (patch)
tree0e07d94487130d1d2fdd3c2506abc0f4e29c3923 /gnu
parentf063f0efebe484a0f4cb1aed6e49053860fdd822 (diff)
downloadpatches-bc70516bbae8a6388f3ed19008d3e10efd1577a7.tar
patches-bc70516bbae8a6388f3ed19008d3e10efd1577a7.tar.gz
gnu: Remove r-loomr.
The loomR package is actually non-free software according to its author. See https://github.com/mojaveazure/loomR/pull/24. * gnu/packages/bioinformatics.scm (r-loomr): Remove variable.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioinformatics.scm29
1 files changed, 0 insertions, 29 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 8dbcd5dd33..b950b8cf53 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -13086,35 +13086,6 @@ known and yet unknown splice junctions. Circular-to-linear ratios of circRNAs
can be calculated, and a number of descriptive plots easily generated.")
(license license:artistic2.0)))
-(define-public r-loomr
- (let ((commit "df0144bd2bbceca6fadef9edc1bbc5ca672d4739")
- (revision "1"))
- (package
- (name "r-loomr")
- (version (git-version "0.2.0" revision commit))
- (source
- (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/mojaveazure/loomR.git")
- (commit commit)))
- (file-name (git-file-name name version))
- (sha256
- (base32
- "1b1g4dlmfdyhn56bz1mkh9ymirri43wiz7rjhs7py3y7bdw1s3yr"))))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-r6" ,r-r6)
- ("r-hdf5r" ,r-hdf5r)
- ("r-iterators" ,r-iterators)
- ("r-itertools" ,r-itertools)
- ("r-matrix" ,r-matrix)))
- (home-page "https://github.com/mojaveazure/loomR")
- (synopsis "R interface for loom files")
- (description "This package provides an R interface to access, create,
-and modify loom files. loomR aims to be completely compatible with loompy.")
- (license license:gpl3))))
-
(define-public gffread
;; We cannot use the tagged release because it is not in sync with gclib.
;; See https://github.com/gpertea/gffread/issues/26