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| author | Ben Woodcroft <donttrustben@gmail.com> | 2017-07-14 18:54:03 +1000 |
|---|---|---|
| committer | Ben Woodcroft <donttrustben@gmail.com> | 2017-07-14 18:54:10 +1000 |
| commit | d6e63cf31cc113e310cd0e5dda9ac4f73a5caeae (patch) | |
| tree | a51bf98b7f95363716893f7ab10de589e8e9e27e /gnu | |
| parent | 78a81e37cddc31af93002b9853ebd79e9828fa8a (diff) | |
| download | patches-d6e63cf31cc113e310cd0e5dda9ac4f73a5caeae.tar patches-d6e63cf31cc113e310cd0e5dda9ac4f73a5caeae.tar.gz | |
gnu: bowtie: Update to 2.3.2.
* gnu/packages/bioinformatics.scm (bowtie): Update to 2.3.2.
[inputs]: Add zlib.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 18 |
1 files changed, 10 insertions, 8 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 82cd1e420d..a9f6259897 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1195,7 +1195,7 @@ errors at the end of reads.") (define-public bowtie (package (name "bowtie") - (version "2.2.9") + (version "2.3.2") (source (origin (method url-fetch) (uri (string-append "https://github.com/BenLangmead/bowtie2/archive/v" @@ -1203,7 +1203,7 @@ errors at the end of reads.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "1vp5db8i7is57iwjybcdg18f5ivyzlj5g1ix1nlvxainzivhz55g")) + "0hwa5r9qbglppb7sz5z79rlmmddr3n51n468jb3wh8rwjgn3yr90")) (modules '((guix build utils))) (snippet '(substitute* "Makefile" @@ -1211,12 +1211,14 @@ errors at the end of reads.") (("-DBUILD_HOST=.*") "-DBUILD_HOST=\"\\\"guix\\\"\"") (("-DBUILD_TIME=.*") "-DBUILD_TIME=\"\\\"0\\\"\""))))) (build-system gnu-build-system) - (inputs `(("perl" ,perl) - ("perl-clone" ,perl-clone) - ("perl-test-deep" ,perl-test-deep) - ("perl-test-simple" ,perl-test-simple) - ("python" ,python-2) - ("tbb" ,tbb))) + (inputs + `(("perl" ,perl) + ("perl-clone" ,perl-clone) + ("perl-test-deep" ,perl-test-deep) + ("perl-test-simple" ,perl-test-simple) + ("python" ,python-2) + ("tbb" ,tbb) + ("zlib" ,zlib))) (arguments '(#:make-flags (list "allall" |