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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-09-05 23:33:52 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-09-06 15:00:49 +0200 |
| commit | 7cd446fd3f1d3b5dce4800d1daba2fa31a07f1b2 (patch) | |
| tree | 1f897c7fc9f56dfd846ee3305cf811ca5bf8a5c9 /gnu | |
| parent | 41ba4cf1503cc7448aa99813438cc5bdf2c00c1c (diff) | |
| download | patches-7cd446fd3f1d3b5dce4800d1daba2fa31a07f1b2.tar patches-7cd446fd3f1d3b5dce4800d1daba2fa31a07f1b2.tar.gz | |
gnu: Add r-txdb-celegans-ucsc-ce6-ensgene.
* gnu/packages/bioconductor.scm (r-txdb-celegans-ucsc-ce6-ensgene): New
variable.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 3ba5415597..37cd51d16c 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -708,6 +708,31 @@ the TxDb object of Mouse data as provided by UCSC (mm10, December 2011) based on the knownGene track.") (license license:artistic2.0))) +(define-public r-txdb-celegans-ucsc-ce6-ensgene + (package + (name "r-txdb-celegans-ucsc-ce6-ensgene") + (version "3.2.2") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "TxDb.Celegans.UCSC.ce6.ensGene" + version 'annotation)) + (sha256 + (base32 + "1sgppva33cdy4isj2is8mfalj5gmmkpbkq9w1d83a4agcq31mi90")))) + (properties + `((upstream-name . "TxDb.Celegans.UCSC.ce6.ensGene"))) + (build-system r-build-system) + (propagated-inputs + `(("r-annotationdbi" ,r-annotationdbi) + ("r-genomicfeatures" ,r-genomicfeatures))) + (home-page "https://bioconductor.org/packages/TxDb.Celegans.UCSC.ce6.ensGene/") + (synopsis "Annotation package for C elegans TxDb objects") + (description + "This package exposes a C elegans annotation database generated from UCSC +by exposing these as TxDb objects.") + (license license:artistic2.0))) + (define-public r-fdb-infiniummethylation-hg19 (package (name "r-fdb-infiniummethylation-hg19") |