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authorRoel Janssen <roel@gnu.org>2016-07-04 14:39:16 +0200
committerRoel Janssen <roel@gnu.org>2016-07-04 14:39:16 +0200
commit7d4224d7942868d3cdcf2438dcb5a2f9e46f2f07 (patch)
treeeadbb204dca060370f0a1845bb17df71b007c521 /gnu
parent7034791aa25db02e392495c44d68a5de937bdf7a (diff)
downloadpatches-7d4224d7942868d3cdcf2438dcb5a2f9e46f2f07.tar
patches-7d4224d7942868d3cdcf2438dcb5a2f9e46f2f07.tar.gz
gnu: Add r-limma.
* gnu/packages/bioinformatics.scm (r-limma): New variable.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioinformatics.scm19
1 files changed, 19 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index caab01ddd1..05c3b7f7b9 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4469,6 +4469,25 @@ names in their natural, rather than lexicographic, order.")
coding changes and predict coding outcomes.")
(license license:artistic2.0)))
+(define-public r-limma
+ (package
+ (name "r-limma")
+ (version "3.28.14")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "limma" version))
+ (sha256
+ (base32
+ "1jgn66ajafhjlqpfcw2p85h6ah8mgmz66znmsw6pcapia7d34akw"))))
+ (build-system r-build-system)
+ (home-page "http://bioinf.wehi.edu.au/limma")
+ (synopsis "Package for linear models for microarray and RNA-seq data")
+ (description "This package can be used for the analysis of gene expression
+studies, especially the use of linear models for analysing designed experiments
+and the assessment of differential expression. The analysis methods apply to
+different technologies, including microarrays, RNA-seq, and quantitative PCR.")
+ (license license:gpl2+)))
+
(define-public r-xvector
(package
(name "r-xvector")