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| author | Tobias Geerinckx-Rice <me@tobias.gr> | 2016-12-19 21:13:53 +0100 |
|---|---|---|
| committer | Tobias Geerinckx-Rice <me@tobias.gr> | 2016-12-20 05:36:55 +0100 |
| commit | 33d5b2464deffc24473ff6542f6731deaba8faba (patch) | |
| tree | 3324c19631a8a688a19d3823114bbe28db6fbdea /gnu | |
| parent | 2fb5af2c2ba9087abc4cc53652cd02c2c0cd49bb (diff) | |
| download | patches-33d5b2464deffc24473ff6542f6731deaba8faba.tar patches-33d5b2464deffc24473ff6542f6731deaba8faba.tar.gz | |
gnu: cutadapt: Use ‘modify-phases’ syntax.
* gnu/packages/bioinformatics.scm (cutadapt)[arguments]: Use
‘modify-phases’.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 29 |
1 files changed, 15 insertions, 14 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index f363936421..912941e113 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1816,20 +1816,21 @@ preparation protocols.") "19smhh6444ikn4jlmyhvffw4m5aw7yg07rqsk7arg8dkwyga1i4v")))) (build-system python-build-system) (arguments - ;; tests must be run after install - `(#:phases (alist-cons-after - 'install 'check - (lambda* (#:key inputs outputs #:allow-other-keys) - (setenv "PYTHONPATH" - (string-append - (getenv "PYTHONPATH") - ":" (assoc-ref outputs "out") - "/lib/python" - (string-take (string-take-right - (assoc-ref inputs "python") 5) 3) - "/site-packages")) - (zero? (system* "nosetests" "-P" "tests"))) - (alist-delete 'check %standard-phases)))) + `(#:phases + (modify-phases %standard-phases + ;; The tests must be run after installation. + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (setenv "PYTHONPATH" + (string-append + (getenv "PYTHONPATH") + ":" (assoc-ref outputs "out") + "/lib/python" + (string-take (string-take-right + (assoc-ref inputs "python") 5) 3) + "/site-packages")) + (zero? (system* "nosetests" "-P" "tests"))))))) (inputs `(("python-xopen" ,python-xopen))) (native-inputs |