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| author | Ricardo Wurmus <rekado@elephly.net> | 2018-04-21 22:25:50 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2018-04-21 23:07:52 +0200 |
| commit | c36ce4763550deb521009ed3c5e83911e4e85005 (patch) | |
| tree | 23692ad03ab7445ef37e9a6818272e29b7ff09e3 /gnu | |
| parent | 3cf9ae2f758d130fe4e9dcb3535bd5b8b4bb0377 (diff) | |
| download | patches-c36ce4763550deb521009ed3c5e83911e4e85005.tar patches-c36ce4763550deb521009ed3c5e83911e4e85005.tar.gz | |
gnu: r-seurat: Update to 2.3.0.
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.3.0.
[propagated-inputs]: Add r-cluster, r-dosnow, r-fitdistrplus, r-foreach,
r-lmtest, r-png, and r-rann.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 11 |
1 files changed, 9 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a000d9d1fc..a060139755 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -9638,13 +9638,13 @@ and irregular enzymatic cleavages, mass measurement accuracy, etc.") (define-public r-seurat (package (name "r-seurat") - (version "2.2.1") + (version "2.3.0") (source (origin (method url-fetch) (uri (cran-uri "Seurat" version)) (sha256 (base32 - "1sr82nf38hq07avrfn8vlrzjq7dfm4pcr8l1nh6mnglcql2bk9z2")) + "0kp3lw1s896zkjd6x2wp8qcg7wnm5b40g8vihps13f1m7j4nx7r0")) ;; Delete pre-built jar. (snippet '(begin (delete-file "inst/java/ModularityOptimizer.jar") @@ -9674,11 +9674,15 @@ Main-Class: ModularityOptimizer\n"))) (propagated-inputs `(("r-ape" ,r-ape) ("r-caret" ,r-caret) + ("r-cluster" ,r-cluster) ("r-cowplot" ,r-cowplot) ("r-diffusionmap" ,r-diffusionmap) + ("r-dosnow" ,r-dosnow) ("r-dplyr" ,r-dplyr) ("r-dtw" ,r-dtw) + ("r-fitdistrplus" ,r-fitdistrplus) ("r-fnn" ,r-fnn) + ("r-foreach" ,r-foreach) ("r-fpc" ,r-fpc) ("r-gdata" ,r-gdata) ("r-ggplot2" ,r-ggplot2) @@ -9690,13 +9694,16 @@ Main-Class: ModularityOptimizer\n"))) ("r-igraph" ,r-igraph) ("r-irlba" ,r-irlba) ("r-lars" ,r-lars) + ("r-lmtest" ,r-lmtest) ("r-mass" ,r-mass) ("r-matrix" ,r-matrix) ("r-metap" ,r-metap) ("r-mixtools" ,r-mixtools) ("r-pbapply" ,r-pbapply) ("r-plotly" ,r-plotly) + ("r-png" ,r-png) ("r-ranger" ,r-ranger) + ("r-rann" ,r-rann) ("r-rcolorbrewer" ,r-rcolorbrewer) ("r-rcpp" ,r-rcpp) ("r-rcppeigen" ,r-rcppeigen) |