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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-09-15 22:54:21 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-09-15 22:54:21 +0200 |
| commit | 2a360cf6acde00f96dcca8bf6dcc2f4fa1563da1 (patch) | |
| tree | c4d422ea8f6995794e25467b4840d3208c56912d /gnu/packages | |
| parent | f5349b4d5a4a9c93da9eed79e32461df6606cbde (diff) | |
| download | patches-2a360cf6acde00f96dcca8bf6dcc2f4fa1563da1.tar patches-2a360cf6acde00f96dcca8bf6dcc2f4fa1563da1.tar.gz | |
gnu: Add r-wavetiling.
* gnu/packages/bioconductor.scm (r-wavetiling): New variable.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 807ddedc75..ec3451b704 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -5975,3 +5975,34 @@ strength of GenomeGraphs is to plot different data types such as array CGH, gene expression, sequencing and other data, together in one plot using the same genome coordinate system.") (license license:artistic2.0))) + +(define-public r-wavetiling + (package + (name "r-wavetiling") + (version "1.26.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "waveTiling" version)) + (sha256 + (base32 + "0l0saa0myabpq2rl9dq70zff8jpxr3mkanxlj65hc41f0m5xllir")))) + (properties `((upstream-name . "waveTiling"))) + (build-system r-build-system) + (propagated-inputs + `(("r-affy" ,r-affy) + ("r-biobase" ,r-biobase) + ("r-biostrings" ,r-biostrings) + ("r-genomegraphs" ,r-genomegraphs) + ("r-genomicranges" ,r-genomicranges) + ("r-iranges" ,r-iranges) + ("r-oligo" ,r-oligo) + ("r-oligoclasses" ,r-oligoclasses) + ("r-preprocesscore" ,r-preprocesscore) + ("r-waveslim" ,r-waveslim))) + (home-page "https://r-forge.r-project.org/projects/wavetiling/") + (synopsis "Wavelet-based models for tiling array transcriptome analysis") + (description + "This package is designed to conduct transcriptome analysis for tiling +arrays based on fast wavelet-based functional models.") + (license license:gpl2+))) |