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authorRicardo Wurmus <rekado@elephly.net>2019-03-29 17:49:54 +0100
committerRicardo Wurmus <rekado@elephly.net>2019-03-29 17:49:54 +0100
commit0b91b7b969567e2f149606ab76ec34d332a52db6 (patch)
tree0ed501a332a0a2d800514da3839ff410a97c36bf /gnu/packages
parent9bf4bb19c9f4a85fb7ea96f9f70add9b2a1513db (diff)
downloadpatches-0b91b7b969567e2f149606ab76ec34d332a52db6.tar
patches-0b91b7b969567e2f149606ab76ec34d332a52db6.tar.gz
gnu: Add r-annotationfuncs.
* gnu/packages/bioconductor.scm (r-annotationfuncs): New variable.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioconductor.scm25
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index cbde3b54b0..599f774042 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -3460,3 +3460,28 @@ regions. The core function @code{aba_enrich} integrates the expression of the
candidate gene set (averaged across donors) and the structural information of
the brain using an ontology, both provided by the Allen Brain Atlas project.")
(license license:gpl2+)))
+
+(define-public r-annotationfuncs
+ (package
+ (name "r-annotationfuncs")
+ (version "1.32.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "AnnotationFuncs" version))
+ (sha256
+ (base32
+ "1x11mfabh7kbp39y5rkmrpjkaawx7ab5anfmciamrmrcw1kddbss"))))
+ (properties
+ `((upstream-name . "AnnotationFuncs")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-annotationdbi" ,r-annotationdbi)
+ ("r-dbi" ,r-dbi)))
+ (home-page "https://www.iysik.com/r/annotationfuncs")
+ (synopsis "Annotation translation functions")
+ (description
+ "This package provides functions for handling translating between
+different identifieres using the Biocore Data Team data-packages (e.g.
+@code{org.Bt.eg.db}).")
+ (license license:gpl2)))