aboutsummaryrefslogtreecommitdiff
path: root/gnu/packages
diff options
context:
space:
mode:
authorRicardo Wurmus <rekado@elephly.net>2018-06-02 11:41:47 +0200
committerRicardo Wurmus <rekado@elephly.net>2018-06-02 13:39:06 +0200
commitf794e85daa8c401ab22b5bdacd897ccf9ea3b266 (patch)
tree18011077d1d5d2a1a2ce78132b7ef288e7bc2b2d /gnu/packages
parent43734b47279b7e0d689297aff614b53b61495569 (diff)
downloadpatches-f794e85daa8c401ab22b5bdacd897ccf9ea3b266.tar
patches-f794e85daa8c401ab22b5bdacd897ccf9ea3b266.tar.gz
gnu: r-chippeakanno: Update to 3.14.0.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.0. [propagated-inputs]: Add r-biostrings, r-delayedarray, r-genomicranges, r-iranges, and r-s4vectors.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioconductor.scm9
1 files changed, 7 insertions, 2 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 16b5e71452..536349049c 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -226,23 +226,27 @@ expressed genes in DNA microarray experiments.")
(define-public r-chippeakanno
(package
(name "r-chippeakanno")
- (version "3.12.7")
+ (version "3.14.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "ChIPpeakAnno" version))
(sha256
(base32
- "1zab489d7a6bh6ylc68x6yn47gdkmr7p3677grx9l2qafrryjr04"))))
+ "1kcnc3cnmrhdk1x7q3y6zsz09pgd3xn9xy1hfbxz48cajlb18ad0"))))
(properties `((upstream-name . "ChIPpeakAnno")))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
+ ("r-biostrings" ,r-biostrings)
+ ("r-delayedarray" ,r-delayedarray)
("r-go-db" ,r-go-db)
("r-biomart" ,r-biomart)
("r-bsgenome" ,r-bsgenome)
("r-genomicfeatures" ,r-genomicfeatures)
+ ("r-genomicranges" ,r-genomicranges)
("r-genomeinfodb" ,r-genomeinfodb)
+ ("r-iranges" ,r-iranges)
("r-matrixstats" ,r-matrixstats)
("r-annotationdbi" ,r-annotationdbi)
("r-limma" ,r-limma)
@@ -254,6 +258,7 @@ expressed genes in DNA microarray experiments.")
("r-dbi" ,r-dbi)
("r-ensembldb" ,r-ensembldb)
("r-biobase" ,r-biobase)
+ ("r-s4vectors" ,r-s4vectors)
("r-seqinr" ,r-seqinr)
("r-idr" ,r-idr)
("r-genomicalignments" ,r-genomicalignments)