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author | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2019-01-09 16:46:52 +0100 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2019-01-09 17:13:52 +0100 |
commit | e50722c8e67994b5d24843c6920bb01b9e96bddb (patch) | |
tree | 89aa9acfa62ed5acecf1a528ec496b5689852c71 /gnu/packages | |
parent | 6a5bfe09ebfeff74b462e9260f5d902c86f88a61 (diff) | |
download | patches-e50722c8e67994b5d24843c6920bb01b9e96bddb.tar patches-e50722c8e67994b5d24843c6920bb01b9e96bddb.tar.gz |
gnu: Add r-genenet.
* gnu/packages/cran.scm (r-genenet): New variable.
Diffstat (limited to 'gnu/packages')
-rw-r--r-- | gnu/packages/cran.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index e420d2eb66..dd924a1ca1 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -10121,3 +10121,30 @@ longitudinal data with multiple variables, repeated measurements, and irregularly spaced time points. It also implements a shrinkage estimator of dynamical correlation and dynamical covariance.") (license license:gpl3+))) + +(define-public r-genenet + (package + (name "r-genenet") + (version "1.2.13") + (source + (origin + (method url-fetch) + (uri (cran-uri "GeneNet" version)) + (sha256 + (base32 + "0w52apk0nnr8nsskf26ff7ana8xiksr8wqmkjxzwhzgg7fncm61p")))) + (properties `((upstream-name . "GeneNet"))) + (build-system r-build-system) + (propagated-inputs + `(("r-corpcor" ,r-corpcor) + ("r-fdrtool" ,r-fdrtool) + ("r-longitudinal" ,r-longitudinal))) + (home-page "http://strimmerlab.org/software/genenet/") + (synopsis "Modeling and inferring gene networks") + (description + "This package analyzes gene expression (time series) data with focus on +the inference of gene networks. In particular, GeneNet implements the methods +of Schaefer and Strimmer (2005a,b,c) and Opgen-Rhein and Strimmer (2006, 2007) +for learning large-scale gene association networks (including assignment of +putative directions).") + (license license:gpl3+))) |