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| author | Ricardo Wurmus <rekado@elephly.net> | 2016-10-26 08:54:23 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2016-10-26 09:28:14 +0200 |
| commit | 37d96f1ddee6c25bb8b6a7c600c32454eabcdd82 (patch) | |
| tree | f0ef39c694ae5843c3e1b01e3c8b342e424f5c59 /gnu/packages | |
| parent | 5e48005fa96d25214b8afb1bd61abbfa9cc243b9 (diff) | |
| download | patches-37d96f1ddee6c25bb8b6a7c600c32454eabcdd82.tar patches-37d96f1ddee6c25bb8b6a7c600c32454eabcdd82.tar.gz | |
gnu: r-variantannotation: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to
1.20.0.
[propagated-inputs]: Add r-biobase, r-biostrings, r-iranges,
r-rtracklayer, r-s4vectors, r-xvector.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 10 |
1 files changed, 8 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 11810589ba..058bbaeb73 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -6188,27 +6188,33 @@ CAGE.") (define-public r-variantannotation (package (name "r-variantannotation") - (version "1.18.7") + (version "1.20.0") (source (origin (method url-fetch) (uri (bioconductor-uri "VariantAnnotation" version)) (sha256 (base32 - "002kif2c66wbcng953m3g1jys7w1lgz7hh3zsk4jlnhc20jdv1vj")))) + "1lwzfgahz8ipwli73kcfqb18y6adi129hap1gnycnj3980m54i8q")))) (properties `((upstream-name . "VariantAnnotation"))) (inputs `(("zlib" ,zlib))) (propagated-inputs `(("r-annotationdbi" ,r-annotationdbi) + ("r-biobase" ,r-biobase) ("r-biocgenerics" ,r-biocgenerics) + ("r-biostrings" ,r-biostrings) ("r-bsgenome" ,r-bsgenome) ("r-dbi" ,r-dbi) ("r-genomeinfodb" ,r-genomeinfodb) ("r-genomicfeatures" ,r-genomicfeatures) ("r-genomicranges" ,r-genomicranges) + ("r-iranges" ,r-iranges) ("r-summarizedexperiment" ,r-summarizedexperiment) ("r-rsamtools" ,r-rsamtools) + ("r-rtracklayer" ,r-rtracklayer) + ("r-s4vectors" ,r-s4vectors) + ("r-xvector" ,r-xvector) ("r-zlibbioc" ,r-zlibbioc))) (build-system r-build-system) (home-page "https://bioconductor.org/packages/VariantAnnotation") |