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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-03-13 13:16:22 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-03-13 13:17:52 +0100 |
| commit | f4eac09653ddebbe57e16824da42aad04af35632 (patch) | |
| tree | 1de510b2600f2b3b67bfc96795aca23efa518c06 /gnu/packages | |
| parent | eed6ff0358dc510e3d71bfe72aba4620de7d3418 (diff) | |
| download | patches-f4eac09653ddebbe57e16824da42aad04af35632.tar patches-f4eac09653ddebbe57e16824da42aad04af35632.tar.gz | |
gnu: Add r-siggenes.
* gnu/packages/bioconductor.scm (r-siggenes): New variable.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index c188dacfbd..b29ae9d607 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2175,3 +2175,28 @@ the bridge between GEO and BioConductor.") "This package provides tools for parsing Illumina's microarray output files, including IDAT.") (license license:gpl2))) + +(define-public r-siggenes + (package + (name "r-siggenes") + (version "1.56.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "siggenes" version)) + (sha256 + (base32 + "0cjlb5r04x15xkhk00i3wvpx21kj0k29pn0mj3whwqk31zznnk1b")))) + (build-system r-build-system) + (propagated-inputs + `(("r-biobase" ,r-biobase) + ("r-multtest" ,r-multtest))) + (home-page "https://bioconductor.org/packages/siggenes/") + (synopsis + "Multiple testing using SAM and Efron's empirical Bayes approaches") + (description + "This package provides tools for the identification of differentially +expressed genes and estimation of the @dfn{False Discovery Rate} (FDR) using +both the Significance Analysis of Microarrays (SAM) and the @dfn{Empirical +Bayes Analyses of Microarrays} (EBAM).") + (license license:lgpl2.0+))) |