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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-03-29 15:40:06 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-03-29 17:13:45 +0100 |
| commit | e5bff3079d673d1d7816b0c30142935ef1e05791 (patch) | |
| tree | 8f3f212099ead7a3eed03fd1772f8dd5b2d11728 /gnu/packages | |
| parent | 2a72ef561b53b69210df2c1562f9d8ced35adabd (diff) | |
| download | patches-e5bff3079d673d1d7816b0c30142935ef1e05791.tar patches-e5bff3079d673d1d7816b0c30142935ef1e05791.tar.gz | |
gnu: Add r-genomicscores.
* gnu/packages/bioconductor.scm (r-genomicscores): New variable.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index af2d7ce335..0daea685e5 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -3271,3 +3271,34 @@ sequence motifs and amino acid sequence motifs. In addition, it provides the flexibility for users to customize the graphic parameters such as the font type and symbol colors.") (license license:gpl2+))) + +(define-public r-genomicscores + (package + (name "r-genomicscores") + (version "1.6.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "GenomicScores" version)) + (sha256 + (base32 + "0lrhkcblvnki6kncwpavs01gbcz22yza6ma8zvfmbrrkfaxqzh8n")))) + (properties `((upstream-name . "GenomicScores"))) + (build-system r-build-system) + (propagated-inputs + `(("r-annotationhub" ,r-annotationhub) + ("r-biobase" ,r-biobase) + ("r-biocgenerics" ,r-biocgenerics) + ("r-biostrings" ,r-biostrings) + ("r-bsgenome" ,r-bsgenome) + ("r-genomeinfodb" ,r-genomeinfodb) + ("r-genomicranges" ,r-genomicranges) + ("r-iranges" ,r-iranges) + ("r-s4vectors" ,r-s4vectors) + ("r-xml" ,r-xml))) + (home-page "https://github.com/rcastelo/GenomicScores/") + (synopsis "Work with genome-wide position-specific scores") + (description + "This package provides infrastructure to store and access genome-wide +position-specific scores within R and Bioconductor.") + (license license:artistic2.0))) |