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authorRicardo Wurmus <rekado@elephly.net>2016-09-21 21:38:01 +0200
committerRicardo Wurmus <rekado@elephly.net>2016-09-21 21:38:39 +0200
commitb78891b0120c2e6f7752912d43bc59e18ed9c465 (patch)
tree33d045136a302e77b80b5cfc4a8b4608ec0eb293 /gnu/packages/statistics.scm
parent3f1c722ec74dcf81833ffc7b2d4151241b31540e (diff)
downloadpatches-b78891b0120c2e6f7752912d43bc59e18ed9c465.tar
patches-b78891b0120c2e6f7752912d43bc59e18ed9c465.tar.gz
gnu: r-rmarkdown: Ensure temporary files can be deleted.
* gnu/packages/statistics.scm (r-rmarkdown)[arguments]: Add phase "copy-files-without-mode".
Diffstat (limited to 'gnu/packages/statistics.scm')
-rw-r--r--gnu/packages/statistics.scm14
1 files changed, 14 insertions, 0 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 853a259c85..2a9a31e3e2 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -1953,6 +1953,20 @@ encoder/decoder, round-off-error-free sum and cumsum, etc.")
"0c7gs9c8xdjfxviw0syh13pf3vys2b2ssixmnyqbji64xdscn7pz"))))
(properties `((upstream-name . "rmarkdown")))
(build-system r-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ ;; See https://github.com/rstudio/rmarkdown/pull/800
+ ;; The resource files are in the store and have mode 444. After
+ ;; copying the files R fails to remove them again because it doesn't
+ ;; have write access to them.
+ (add-after 'unpack 'copy-files-without-mode
+ (lambda _
+ (substitute* "R/render.R"
+ (("file.copy\\(from = from," prefix)
+ (string-append prefix
+ " copy.mode = FALSE, ")))
+ #t)))))
(propagated-inputs
`(("r-catools" ,r-catools)
("r-htmltools" ,r-htmltools)