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| author | Paul Garlick <pgarlick@tourbillion-technology.com> | 2018-11-12 16:00:36 +0000 |
|---|---|---|
| committer | Ludovic Courtès <ludo@gnu.org> | 2018-11-14 21:34:08 +0100 |
| commit | f7a4757a4cabfe70f07216ab3f7eac60a80b82ad (patch) | |
| tree | 857b14aa004f9a78ebdb59bfe38e8e715dd31fa6 /gnu/packages/simulation.scm | |
| parent | 6b5687d053a4d0211e6ded1a8d129d065c71430c (diff) | |
| download | patches-f7a4757a4cabfe70f07216ab3f7eac60a80b82ad.tar patches-f7a4757a4cabfe70f07216ab3f7eac60a80b82ad.tar.gz | |
gnu: Add python-fenics-dijitso.
* gnu/packages/simulation.scm (python-fenics-dijitso): New varaible.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Diffstat (limited to 'gnu/packages/simulation.scm')
| -rw-r--r-- | gnu/packages/simulation.scm | 51 |
1 files changed, 50 insertions, 1 deletions
diff --git a/gnu/packages/simulation.scm b/gnu/packages/simulation.scm index a5b661e34d..86b1aba695 100644 --- a/gnu/packages/simulation.scm +++ b/gnu/packages/simulation.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2017 Paul Garlick <pgarlick@tourbillion-technology.com> +;;; Copyright © 2017, 2018 Paul Garlick <pgarlick@tourbillion-technology.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -22,6 +22,7 @@ #:use-module (gnu packages bash) #:use-module (gnu packages bison) #:use-module (gnu packages boost) + #:use-module (gnu packages check) #:use-module (gnu packages compression) #:use-module (gnu packages flex) #:use-module (gnu packages gettext) @@ -35,6 +36,7 @@ #:use-module (gnu packages mpi) #:use-module (gnu packages multiprecision) #:use-module (gnu packages ncurses) + #:use-module (gnu packages python) #:use-module (gnu packages readline) #:use-module (gnu packages tls) #:use-module (gnu packages version-control) @@ -43,6 +45,7 @@ #:use-module (guix download) #:use-module (guix build utils) #:use-module (guix build-system gnu) + #:use-module (guix build-system python) #:use-module ((guix licenses) #:prefix license:) #:use-module (guix packages) #:use-module (guix utils) @@ -221,3 +224,49 @@ with gas/liquid interfaces. Large problems may be split into smaller, connected problems for efficient solution on parallel systems.") (license license:gpl3+) (home-page "https://openfoam.org"))) + +(define-public python-fenics-dijitso + (package + (name "python-fenics-dijitso") + (version "2018.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "fenics-dijitso" version)) + (sha256 + (base32 + "1qax2f52qsjbd1h5lk5i5shp448qlakxabjjybrfc1w823p0yql9")))) + (build-system python-build-system) + (inputs + `(("openmpi" ,openmpi) + ("python-numpy" ,python-numpy))) + (native-inputs + `(("python-pytest-cov" ,python-pytest-cov))) + (propagated-inputs + `(("python-mpi4py" ,python-mpi4py))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'build 'mpi-setup + ,%openmpi-setup) + (replace 'check + (lambda _ + (setenv "HOME" "/tmp") + (setenv "PYTHONPATH" + (string-append (getcwd) ":" (getenv "PYTHONPATH"))) + (with-directory-excursion "test" + (invoke "./runtests.sh")) + #t))))) + (home-page "https://bitbucket.org/fenics-project/dijitso/") + (synopsis "Distributed just-in-time building of shared libraries") + (description + "Dijitso provides a core component of the @code{FEniCS} framework, +namely the just-in-time compilation of C++ code that is generated from +Python modules. It is called from within a C++ library, using ctypes +to import the dynamic shared library directly. + +As long as the compiled code can provide a simple factory function to +a class implementing a predefined C++ interface, there is no limit to +the complexity of that interface. Parallel support depends on the +@code{mpi4py} interface.") + (license license:lgpl3+))) |