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authorMarius Bakke <mbakke@fastmail.com>2019-04-17 00:08:34 +0200
committerMarius Bakke <mbakke@fastmail.com>2019-04-17 00:08:34 +0200
commitf5961dd5854cec1ed9a41365836d63aa15256642 (patch)
tree9e6168827adf5e4e90128d55fad6f0ab6448c86a /gnu/packages/maths.scm
parent05bb85fda06dc361b8d3d1eef0759606784b3130 (diff)
parente28ff04108ae7506a21d451cc23d63937076e2a3 (diff)
downloadpatches-f5961dd5854cec1ed9a41365836d63aa15256642.tar
patches-f5961dd5854cec1ed9a41365836d63aa15256642.tar.gz
Merge branch 'master' into staging
Diffstat (limited to 'gnu/packages/maths.scm')
-rw-r--r--gnu/packages/maths.scm110
1 files changed, 55 insertions, 55 deletions
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 6746013fad..9bf5f03390 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -650,13 +650,13 @@ plotting engine by third-party applications like Octave.")
(version "2.0.0")
(source
(origin
- (method url-fetch)
- (uri (string-append "https://github.com/OkoSanto/GCTP/archive/v"
- version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/OkoSanto/GCTP.git")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
(sha256
- (base32
- "0l9aqnqynh9laicn5dxf3rsb1n14xiks79wbyqccirzmjqd1c1x4"))))
+ (base32 "11wqmd443b4nksdbzp1msdws3av948nmwq1xz80w6hka3ss2aigd"))))
(native-inputs
`(("fortran" ,gfortran)))
(build-system gnu-build-system)
@@ -1555,15 +1555,14 @@ script files.")
(version "0.17.2")
(source
(origin
- (method url-fetch)
- (uri (string-append
- "https://github.com/tpaviot/oce/archive/OCE-"
- version
- ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/tpaviot/oce.git")
+ (commit (string-append "OCE-" version))))
+ (file-name (git-file-name name version))
(patches (search-patches "opencascade-oce-glibc-2.26.patch"))
(sha256
- (base32
- "0vpmnb0k5y2f7lpmwx9pg9yfq24zjvnsak5alzacncfm1hv9b6cd"))))
+ (base32 "0rg5wzkvfmzfl6v2amyryb8dnjad0nn9kyr607wy2gch6rciah69"))))
(build-system cmake-build-system)
(arguments
'(#:configure-flags
@@ -2228,12 +2227,12 @@ programming problems.")
(define-public r-pracma
(package
(name "r-pracma")
- (version "2.2.2")
+ (version "2.2.5")
(source (origin
(method url-fetch)
(uri (cran-uri "pracma" version))
(sha256
- (base32 "18zhni05gwnxbphl6bmjjxmsgg5wwnnkwlb4g971cqyw3dsd83ki"))))
+ (base32 "0isd3s0i4mzmva8lkh0j76hwjy1w50q7d1n9lhxsnnkgalx3xs1g"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/pracma/")
(synopsis "Practical numerical math functions")
@@ -2952,13 +2951,13 @@ associated functions (eg. contiguous and non-contiguous submatrix views).")
(version (string-append upstream-version "-" revision))
(source
(origin
- (method url-fetch)
- (uri (string-append "https://github.com/beltoforion/muparser/archive/v"
- upstream-version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/beltoforion/muparser.git")
+ (commit (string-append "v" upstream-version))))
+ (file-name (git-file-name name version))
(sha256
- (base32
- "0277qsi5l23jsck1vhn383bmvc2n9l4a1dl5r9bf7hvjv9ayyrh6"))))
+ (base32 "0f0g4995xngf1pp3zr4p6ai2f8v6f8bxwa0k8ayjjiv1l8h44m24"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags '("--enable-samples=no")
@@ -3146,13 +3145,13 @@ access to BLIS implementations via traditional BLAS routine calls.")
(version "0.6.0")
(source
(origin
- (method url-fetch)
- (uri (string-append "https://github.com/JuliaLang/openlibm/archive/v"
- version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaLang/openlibm.git")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
(sha256
- (base32
- "0a5fpm8nra5ldhjk0cqd2rx1qh32wiarkxmcqcm5xl8z7l4kjm6l"))))
+ (base32 "08wfchmmr5200fvmn1kwq9byc1fhsq46hn0y5k8scdl74771c7gh"))))
(build-system gnu-build-system)
(arguments
`(#:make-flags
@@ -3185,13 +3184,13 @@ environments.")
(version "0.5.3")
(source
(origin
- (method url-fetch)
- (uri (string-append "https://github.com/JuliaLang/openspecfun/archive/v"
- version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaLang/openspecfun.git")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
(sha256
- (base32
- "1rs1bv8jq751fv9vq79890wqf9xlbjc7lvz3ighzyfczbyjcf18m"))))
+ (base32 "0pfw6l3ch7isz403llx7inxlvavqh01jh1hb9dpidi86sjjx9kfh"))))
(build-system gnu-build-system)
(arguments
'(#:tests? #f ; no "check" target
@@ -3682,31 +3681,32 @@ set.")
(define-public hypre
(package
(name "hypre")
- (version "2.14.0")
- (source (origin
- (method url-fetch)
- (uri (string-append "https://github.com/LLNL/hypre/archive/"
- "v" version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
- (sha256
- (base32
- "0v515i73bvaz378h5465b1dy9v2gf924zy2q94cpq4qqarawvkqh"))
- (modules '((guix build utils)))
- (snippet
- '(begin
- ;; Remove use of __DATE__ and __TIME__ for reproducibility;
- ;; substitute the tarball creation time.
- (substitute* "src/utilities/HYPRE_utilities.h"
- (("Date Compiled: .*$")
- "Date Compiled: Apr 11 2018 16:24:59 +0000\"\n"))
- #t))))
+ (version "2.15.1")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/LLNL/hypre.git")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "1lvh4ybqkriyqfg2zmic6mrg1981qv1i9vry1fdgsabn81hb71g4"))
+ (modules '((guix build utils)))
+ (snippet
+ '(begin
+ ;; Remove use of __DATE__ and __TIME__ for reproducibility;
+ ;; substitute the release date.
+ (substitute* "src/utilities/HYPRE_utilities.h"
+ (("Date Compiled: .*$")
+ "Date Compiled: Oct 19 2018 15:23:00 +0000\"\n"))
+ #t))))
(build-system gnu-build-system)
- (outputs '("out" ;6.1 MiB of headers and libraries
- "doc")) ;4.8 MiB of documentation
+ (outputs '("out" ; 6.1 MiB of headers and libraries
+ "doc")) ; 4.8 MiB of documentation
(native-inputs
`(("doc++" ,doc++)
("netpbm" ,netpbm)
- ("perl" ,perl) ;needed to run 'ppmquant' during tests
+ ("perl" ,perl) ; needed to run 'ppmquant' during tests
("texlive" ,(texlive-union (list texlive-generic-xypic
texlive-fonts-xypic
texlive-latex-hyperref
@@ -3770,7 +3770,7 @@ set.")
(with-directory-excursion "docs"
(for-each (lambda (base)
(install-file (string-append base ".pdf") docdir)
- (copy-recursively base docdir)) ;html docs
+ (copy-recursively base docdir)) ; html docs
'("HYPRE_usr_manual"
"HYPRE_ref_manual")))
#t))))))