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authorMarius Bakke <mbakke@fastmail.com>2017-10-10 21:44:32 +0200
committerMarius Bakke <mbakke@fastmail.com>2017-10-10 21:44:32 +0200
commit1c055d72585bd075e20ad0b41942d501d0b38656 (patch)
tree7baf50e22fb5f6c6d4b2fa7197596f68298eb691 /gnu/packages/machine-learning.scm
parent565e24c4e4710a5b81cce5cfb619b3e474e7f65c (diff)
parentffb4da7ad5c0e9cc969e0e47a3b8f4d2eba4d6f3 (diff)
downloadpatches-1c055d72585bd075e20ad0b41942d501d0b38656.tar
patches-1c055d72585bd075e20ad0b41942d501d0b38656.tar.gz
Merge branch 'staging'
Diffstat (limited to 'gnu/packages/machine-learning.scm')
-rw-r--r--gnu/packages/machine-learning.scm88
1 files changed, 42 insertions, 46 deletions
diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm
index 77f64d5a41..8cd01062fd 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -376,54 +376,50 @@ sample proximities between pairs of cases.")
(arguments
'(#:tests? #f ;no check target
#:phases
- (alist-cons-after
- 'unpack 'delete-broken-symlinks
- (lambda _
- (for-each delete-file '("applications/arts/data"
- "applications/asp/data"
- "applications/easysvm/data"
- "applications/msplicer/data"
- "applications/ocr/data"
- "examples/documented/data"
- "examples/documented/matlab_static"
- "examples/documented/octave_static"
- "examples/undocumented/data"
- "examples/undocumented/matlab_static"
- "examples/undocumented/octave_static"
- "tests/integration/data"
- "tests/integration/matlab_static"
- "tests/integration/octave_static"
- "tests/integration/python_modular/tests"))
- #t)
- (alist-cons-after
- 'unpack 'change-R-target-path
- (lambda* (#:key outputs #:allow-other-keys)
- (substitute* '("src/interfaces/r_modular/CMakeLists.txt"
- "src/interfaces/r_static/CMakeLists.txt"
- "examples/undocumented/r_modular/CMakeLists.txt")
- (("\\$\\{R_COMPONENT_LIB_PATH\\}")
- (string-append (assoc-ref outputs "out")
- "/lib/R/library/")))
- #t)
- (alist-cons-after
- 'unpack 'fix-octave-modules
- (lambda* (#:key outputs #:allow-other-keys)
- (substitute* '("src/interfaces/octave_modular/CMakeLists.txt"
- "src/interfaces/octave_static/CMakeLists.txt")
- (("^include_directories\\(\\$\\{OCTAVE_INCLUDE_DIRS\\}")
- "include_directories(${OCTAVE_INCLUDE_DIRS} ${OCTAVE_INCLUDE_DIRS}/octave"))
+ (modify-phases %standard-phases
+ (add-after 'unpack 'delete-broken-symlinks
+ (lambda _
+ (for-each delete-file '("applications/arts/data"
+ "applications/asp/data"
+ "applications/easysvm/data"
+ "applications/msplicer/data"
+ "applications/ocr/data"
+ "examples/documented/data"
+ "examples/documented/matlab_static"
+ "examples/documented/octave_static"
+ "examples/undocumented/data"
+ "examples/undocumented/matlab_static"
+ "examples/undocumented/octave_static"
+ "tests/integration/data"
+ "tests/integration/matlab_static"
+ "tests/integration/octave_static"
+ "tests/integration/python_modular/tests"))
+ #t))
+ (add-after 'unpack 'change-R-target-path
+ (lambda* (#:key outputs #:allow-other-keys)
+ (substitute* '("src/interfaces/r_modular/CMakeLists.txt"
+ "src/interfaces/r_static/CMakeLists.txt"
+ "examples/undocumented/r_modular/CMakeLists.txt")
+ (("\\$\\{R_COMPONENT_LIB_PATH\\}")
+ (string-append (assoc-ref outputs "out")
+ "/lib/R/library/")))
+ #t))
+ (add-after 'unpack 'fix-octave-modules
+ (lambda* (#:key outputs #:allow-other-keys)
+ (substitute* '("src/interfaces/octave_modular/CMakeLists.txt"
+ "src/interfaces/octave_static/CMakeLists.txt")
+ (("^include_directories\\(\\$\\{OCTAVE_INCLUDE_DIRS\\}")
+ "include_directories(${OCTAVE_INCLUDE_DIRS} ${OCTAVE_INCLUDE_DIRS}/octave"))
- ;; change target directory
- (substitute* "src/interfaces/octave_modular/CMakeLists.txt"
- (("\\$\\{OCTAVE_OCT_LOCAL_API_FILE_DIR\\}")
- (string-append (assoc-ref outputs "out")
- "/share/octave/packages")))
- #t)
- (alist-cons-before
- 'build 'set-HOME
+ ;; change target directory
+ (substitute* "src/interfaces/octave_modular/CMakeLists.txt"
+ (("\\$\\{OCTAVE_OCT_LOCAL_API_FILE_DIR\\}")
+ (string-append (assoc-ref outputs "out")
+ "/share/octave/packages")))
+ #t))
+ (add-before 'build 'set-HOME
;; $HOME needs to be set at some point during the build phase
- (lambda _ (setenv "HOME" "/tmp") #t)
- %standard-phases))))
+ (lambda _ (setenv "HOME" "/tmp") #t)))
#:configure-flags
(list "-DCMAKE_BUILD_WITH_INSTALL_RPATH=TRUE"
"-DUSE_SVMLIGHT=OFF" ;disable proprietary SVMLIGHT