Merge branch 'master' into core-updates

1 files changed, 274 insertions, 2 deletions

diff --git a/gnu/packages/lisp.scm b/gnu/packages/lisp.scm
index 9fb25a15a2..6849cdd2bf 100644
--- a/gnu/packages/lisp.scm
+++ b/gnu/packages/lisp.scm
@@ -9,6 +9,7 @@
 ;;; Copyright © 2017, 2018 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
 ;;; Copyright © 2018 Benjamin Slade <slade@jnanam.net>
+;;; Copyright © 2018 Alex Vong <alexvong1995@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -34,6 +35,8 @@
   #:use-module (guix hg-download)
   #:use-module (guix utils)
   #:use-module (guix build-system gnu)
+  #:use-module (guix build-system ant)
+  #:use-module (guix build-system clojure)
   #:use-module (guix build-system asdf)
   #:use-module (guix build-system trivial)
   #:use-module (gnu packages admin)
@@ -530,8 +533,12 @@ statistical profiler, a code coverage tool, and many other extensions.")
                (install-file kernel libdir)
                (install-file heap libdir)
 
-               (let ((dirs '("lib" "library" "examples" "contrib"
-                             "tools" "objc-bridge")))
+               (let ((dirs '("lib" "library" "examples" "tools" "objc-bridge"
+                             ,(match (%current-system)
+                                ("x86_64-linux"
+                                 "x86-headers64")
+                                ("i686-linux"
+                                 "x86-headers")))))
                  (for-each copy-recursively
                            dirs
                            (map (cut string-append libdir <>) dirs)))
@@ -559,6 +566,119 @@ interface.")
     (license (list license:lgpl2.1
                    license:clarified-artistic)))) ;TRIVIAL-LDAP package
 
+(define-public clojure
+  (let* ((lib (lambda (prefix version hash)
+                (origin (method url-fetch)
+                        (uri (string-append "https://github.com/clojure/"
+                                            prefix version ".tar.gz"))
+                        (sha256 (base32 hash)))))
+         ;; The libraries below are needed to run the tests.
+         (libraries
+          `(("core-specs-alpha-src"
+             ,(lib "core.specs.alpha/archive/core.specs.alpha-"
+                   "0.1.24"
+                   "0v2a0svf1ar2y42ajxwsjr7zmm5j7pp2zwrd2jh3k7xzd1p9x1fv"))
+            ("data-generators-src"
+             ,(lib "data.generators/archive/data.generators-"
+                   "0.1.2"
+                   "0kki093jp4ckwxzfnw8ylflrfqs8b1i1wi9iapmwcsy328dmgzp1"))
+            ("spec-alpha-src"
+             ,(lib "spec.alpha/archive/spec.alpha-"
+                   "0.1.143"
+                   "00alf0347licdn773w2jarpllyrbl52qz4d8mw61anjksacxylzz"))
+            ("test-check-src"
+             ,(lib "test.check/archive/test.check-"
+                   "0.9.0"
+                   "0p0mnyhr442bzkz0s4k5ra3i6l5lc7kp6ajaqkkyh4c2k5yck1md"))
+            ("test-generative-src"
+             ,(lib "test.generative/archive/test.generative-"
+                   "0.5.2"
+                   "1pjafy1i7yblc7ixmcpfq1lfbyf3jaljvkgrajn70sws9xs7a9f8"))
+            ("tools-namespace-src"
+             ,(lib "tools.namespace/archive/tools.namespace-"
+                   "0.2.11"
+                   "10baak8v0hnwz2hr33bavshm7y49mmn9zsyyms1dwjz45p5ymhy0"))))
+         (library-names (match libraries
+                          (((library-name _) ...)
+                           library-name))))
+
+    (package
+      (name "clojure")
+      (version "1.9.0")
+      (source
+       (origin
+         (method url-fetch)
+         (uri
+          (string-append "https://github.com/clojure/clojure/archive/clojure-"
+                         version ".tar.gz"))
+         (sha256
+          (base32 "0xjbzcw45z32vsn9pifp7ndysjzqswp5ig0jkjpivigh2ckkdzha"))))
+      (build-system ant-build-system)
+      (arguments
+       `(#:imported-modules ((guix build clojure-utils)
+                             (guix build guile-build-system)
+                             ,@%ant-build-system-modules)
+         #:modules ((guix build ant-build-system)
+                    (guix build clojure-utils)
+                    (guix build java-utils)
+                    (guix build utils)
+                    (srfi srfi-26))
+         #:test-target "test"
+         #:phases
+         (modify-phases %standard-phases
+           (add-after 'unpack 'unpack-library-sources
+             (lambda* (#:key inputs #:allow-other-keys)
+               (define (extract-library name)
+                 (mkdir-p name)
+                 (with-directory-excursion name
+                   (invoke "tar"
+                           "--extract"
+                           "--verbose"
+                           "--file" (assoc-ref inputs name)
+                           "--strip-components=1"))
+                 (copy-recursively (string-append name "/src/main/clojure/")
+                                   "src/clj/"))
+               (for-each extract-library ',library-names)
+               #t))
+           (add-after 'unpack-library-sources 'fix-manifest-classpath
+             (lambda _
+               (substitute* "build.xml"
+                 (("<attribute name=\"Class-Path\" value=\".\"/>") ""))
+               #t))
+           (add-after 'build 'build-javadoc ant-build-javadoc)
+           (replace 'install (install-jars "./"))
+           (add-after 'install-license-files 'install-doc
+             (cut install-doc #:doc-dirs '("doc/clojure/") <...>))
+           (add-after 'install-doc 'install-javadoc
+             (install-javadoc "target/javadoc/")))))
+      (native-inputs libraries)
+      (home-page "https://clojure.org/")
+      (synopsis "Lisp dialect running on the JVM")
+      (description "Clojure is a dynamic, general-purpose programming language,
+combining the approachability and interactive development of a scripting
+language with an efficient and robust infrastructure for multithreaded
+programming.  Clojure is a compiled language, yet remains completely dynamic
+– every feature supported by Clojure is supported at runtime.  Clojure
+provides easy access to the Java frameworks, with optional type hints and type
+inference, to ensure that calls to Java can avoid reflection.
+
+Clojure is a dialect of Lisp, and shares with Lisp the code-as-data philosophy
+and a powerful macro system.  Clojure is predominantly a functional programming
+language, and features a rich set of immutable, persistent data structures.
+When mutable state is needed, Clojure offers a software transactional memory
+system and reactive Agent system that ensure clean, correct, multithreaded
+designs.")
+      ;; Clojure is licensed under EPL1.0
+      ;; ASM bytecode manipulation library is licensed under BSD-3
+      ;; Guava Murmur3 hash implementation is licensed under APL2.0
+      ;; src/clj/repl.clj is licensed under CPL1.0
+
+      ;; See readme.html or readme.txt for details.
+      (license (list license:epl1.0
+                     license:bsd-3
+                     license:asl2.0
+                     license:cpl1.0)))))
+
 (define-public femtolisp
   (let ((commit "68c5b1225572ecf2c52baf62f928063e5a30511b")
         (revision "1"))
@@ -1488,6 +1608,158 @@ compressor.  It works on data produced by @code{parse-js} to generate a
        ("sbcl-cl-uglify-js" ,sbcl-cl-uglify-js)))
     (synopsis "JavaScript compressor")))
 
+(define-public clojure-algo-generic
+  (package
+    (name "clojure-algo-generic")
+    (version "0.1.3")
+    (source
+     (origin
+       (method url-fetch)
+       (uri
+        (string-append "https://github.com/clojure/algo.generic/archive"
+                       "/algo.generic-" version ".tar.gz"))
+       (sha256
+        (base32 "12w9681i545gp1af4576z1qbixwps1j13c16fmcc7zsb0bd1zr7w"))))
+    (build-system clojure-build-system)
+    (arguments
+     '(#:source-dirs '("src/main/clojure/")
+       #:test-dirs '("src/test/clojure/")
+       #:doc-dirs '()))
+    (synopsis "Generic versions of common functions")
+    (description
+     "Generic versions of commonly used functions, implemented as multimethods
+that can be implemented for any data type.")
+    (home-page "https://github.com/clojure/algo.generic")
+    (license license:epl1.0)))
+
+(define-public clojure-algo-monads
+  (package
+    (name "clojure-algo-monads")
+    (version "0.1.6")
+    (source
+     (origin
+       (method url-fetch)
+       (uri
+        (string-append "https://github.com/clojure/algo.monads/archive"
+                       "/algo.monads-" version ".tar.gz"))
+       (sha256
+        (base32 "14gbvfgmrda990h45yn7zag83vp1kdkz4f4yzmyvkr0sjihlgdmq"))))
+    (build-system clojure-build-system)
+    (arguments
+     '(#:source-dirs '("src/main/clojure/")
+       #:test-dirs '("src/test/clojure/")
+       #:doc-dirs '()))
+    (native-inputs
+     `(("clojure-tools-macro" ,clojure-tools-macro)))
+    (synopsis
+     "Monad Macros and Definitions")
+    (description
+     "This library contains the most commonly used monads as well as macros for
+defining and using monads and useful monadic functions.")
+    (home-page "https://github.com/clojure/algo.monads")
+    (license license:epl1.0)))
+
+(define-public clojure-core-match
+  (let ((commit "1837ffbd4a150e8f3953b2d9ed5cf4a4ad3720a7")
+        (revision "1")) ; this is the 1st commit buildable with clojure 1.9
+    (package
+      (name "clojure-core-match")
+      (version (git-version "0.3.0-alpha5" revision commit))
+      (source (origin
+                (method git-fetch)
+                (uri (git-reference
+                      (url "https://github.com/clojure/core.match.git")
+                      (commit commit)))
+                (file-name (git-file-name name version))
+                (sha256
+                 (base32
+                  "04bdlp5dgkrqzrz0lw3mfwmygj2218qnm1cz3dkb9wy4m0238s4d"))))
+      (build-system clojure-build-system)
+      (arguments
+       '(#:source-dirs '("src/main/clojure")
+         #:test-dirs '("src/test/clojure")
+         #:doc-dirs '()))
+      (synopsis "Optimized pattern matching for Clojure")
+      (description
+       "An optimized pattern matching library for Clojure.
+It supports Clojure 1.5.1 and later as well as ClojureScript.")
+      (home-page "https://github.com/clojure/core.match")
+      (license license:epl1.0))))
+
+(define-public clojure-instaparse
+  (let ((commit "dcfffad5b065e750f0f5835f017cdd8188b8ca2e")
+        (version "1.4.9")) ; upstream forget to tag this release
+    (package
+      (name "clojure-instaparse")
+      (version version)
+      (source (origin
+                (method git-fetch)
+                (uri (git-reference
+                      (url "https://github.com/Engelberg/instaparse.git")
+                      (commit commit)))
+                (file-name (git-file-name name version))
+                (sha256
+                 (base32
+                  "002mrgin4z3dqy88r1lak7smd0m7x8d22vmliw0m6w6mh5pa17lk"))))
+      (build-system clojure-build-system)
+      (arguments
+       '(#:doc-dirs '("docs/")))
+      (synopsis "No grammar left behind")
+      (description
+       "Instaparse aims to be the simplest way to build parsers in Clojure.
+
+@itemize
+@item Turns @emph{standard EBNF or ABNF notation} for context-free grammars
+into an executable parser that takes a string as an input and produces a parse
+tree for that string.
+
+@item @dfn{No Grammar Left Behind}: Works for @emph{any} context-free grammar,
+including @emph{left-recursive}, @emph{right-recursive}, and @emph{ambiguous}
+grammars.
+
+@item Extends the power of context-free grammars with PEG-like syntax for
+lookahead and negative lookahead.
+
+@item Supports both of Clojure's most popular tree formats (hiccup and enlive)
+as output targets
+
+@item Detailed reporting of parse errors.
+
+@item Optionally produces lazy sequence of all parses (especially useful for
+diagnosing and debugging ambiguous grammars).
+
+@item ``Total parsing'' mode where leftover string is embedded in the parse
+tree.
+
+@item Optional combinator library for building grammars programmatically.
+
+@item Performant.
+@end itemize")
+      (home-page "https://github.com/Engelberg/instaparse")
+      (license license:epl1.0))))
+
+(define-public clojure-tools-macro
+  (package
+    (name "clojure-tools-macro")
+    (version "0.1.5")
+    (source
+     (origin
+       (method url-fetch)
+       (uri
+        (string-append "https://github.com/clojure/tools.macro/archive"
+                       "/tools.macro-" version ".tar.gz"))
+       (sha256
+        (base32 "0fs64a0g63xx6g7sj6vrsqknhl90s0isf6k053nw8vv5prfzc7v6"))))
+    (build-system clojure-build-system)
+    (arguments
+     '(#:source-dirs '("src/main/clojure/")
+       #:test-dirs '("src/test/clojure/")
+       #:doc-dirs '()))
+    (synopsis "Utilities for macro writers")
+    (description "Tools for writing macros.")
+    (home-page "https://github.com/clojure/tools.macro")
+    (license license:epl1.0)))
+
 (define-public confusion-mdl
   (let* ((commit "12a055581fc262225272df43287dae48281900f5"))
     (package