Merge branch 'master' into staging

1 files changed, 3 insertions, 206 deletions

diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm
index 150369a70c..e1284ee9bd 100644
--- a/gnu/packages/databases.scm
+++ b/gnu/packages/databases.scm
@@ -64,6 +64,7 @@
   #:use-module (gnu packages crypto)
   #:use-module (gnu packages curl)
   #:use-module (gnu packages cyrus-sasl)
+  #:use-module (gnu packages dbm)
   #:use-module (gnu packages emacs)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages glib)
@@ -85,10 +86,12 @@
   #:use-module (gnu packages popt)
   #:use-module (gnu packages python)
   #:use-module (gnu packages python-crypto)
+  #:use-module (gnu packages python-xyz)
   #:use-module (gnu packages rdf)
   #:use-module (gnu packages readline)
   #:use-module (gnu packages ruby)
   #:use-module (gnu packages serialization)
+  #:use-module (gnu packages sqlite)
   #:use-module (gnu packages tcl)
   #:use-module (gnu packages terminals)
   #:use-module (gnu packages textutils)
@@ -159,28 +162,6 @@
 either single machines or networked clusters.")
     (license license:gpl3+)))
 
-(define-public gdbm
-  (package
-    (name "gdbm")
-    (version "1.18")
-    (source (origin
-              (method url-fetch)
-              (uri (string-append "mirror://gnu/gdbm/gdbm-"
-                                  version ".tar.gz"))
-              (sha256
-               (base32
-                "1kimnv12bzjjhaqk4c8w2j6chdj9c6bg21lchaf7abcyfss2r0mq"))))
-    (arguments `(#:configure-flags '("--enable-libgdbm-compat")))
-    (build-system gnu-build-system)
-    (home-page "http://www.gnu.org.ua/software/gdbm")
-    (synopsis
-     "Hash library of database functions compatible with traditional dbm")
-    (description
-     "GDBM is a library for manipulating hashed databases.  It is used to
-store key/value pairs in a file in a manner similar to the Unix dbm library
-and provides interfaces to the traditional file format.")
-    (license license:gpl3+)))
-
 (define-public go-gopkg.in-mgo.v2
   (package
     (name "go-gopkg.in-mgo.v2")
@@ -227,109 +208,6 @@ standard Go idioms.")
     (home-page "http://labix.org/mgo")
     (license license:bsd-2)))
 
-(define-public bdb
-  (package
-    (name "bdb")
-    (version "6.2.32")
-    (source (origin
-              (method url-fetch)
-              (uri (string-append "http://download.oracle.com/berkeley-db/db-"
-                                  version ".tar.gz"))
-              (sha256
-               (base32
-                "1yx8wzhch5wwh016nh0kfxvknjkafv6ybkqh6nh7lxx50jqf5id9"))))
-    (build-system gnu-build-system)
-    (outputs '("out"                             ; programs, libraries, headers
-               "doc"))                           ; 94 MiB of HTML docs
-    (arguments
-     '(#:tests? #f                            ; no check target available
-       #:disallowed-references ("doc")
-       #:phases
-       (modify-phases %standard-phases
-         (replace 'configure
-           (lambda* (#:key outputs #:allow-other-keys)
-             (let ((out (assoc-ref outputs "out"))
-                   (doc (assoc-ref outputs "doc")))
-               ;; '--docdir' is not honored, so we need to patch.
-               (substitute* "dist/Makefile.in"
-                 (("docdir[[:blank:]]*=.*")
-                  (string-append "docdir = " doc "/share/doc/bdb")))
-
-               (invoke "./dist/configure"
-                       (string-append "--prefix=" out)
-                       (string-append "CONFIG_SHELL=" (which "bash"))
-                       (string-append "SHELL=" (which "bash"))
-
-                       ;; Remove 7 MiB of .a files.
-                       "--disable-static"
-
-                       ;; The compatibility mode is needed by some packages,
-                       ;; notably iproute2.
-                       "--enable-compat185"
-
-                       ;; The following flag is needed so that the inclusion
-                       ;; of db_cxx.h into C++ files works; it leads to
-                       ;; HAVE_CXX_STDHEADERS being defined in db_cxx.h.
-                       "--enable-cxx")))))))
-    (synopsis "Berkeley database")
-    (description
-     "Berkeley DB is an embeddable database allowing developers the choice of
-SQL, Key/Value, XML/XQuery or Java Object storage for their data model.")
-    ;; Starting with version 6, BDB is distributed under AGPL3. Many individual
-    ;; files are covered by the 3-clause BSD license.
-    (license (list license:agpl3+ license:bsd-3))
-    (home-page
-     "http://www.oracle.com/us/products/database/berkeley-db/overview/index.html")))
-
-(define-public bdb-5.3
-  (package (inherit bdb)
-    (name "bdb")
-    (version "5.3.28")
-    (license (license:non-copyleft "file://LICENSE"
-                                   "See LICENSE in the distribution."))
-    (source (origin
-              (method url-fetch)
-              (uri (string-append "http://download.oracle.com/berkeley-db/db-"
-                                  version ".tar.gz"))
-              (sha256
-               (base32
-                "0a1n5hbl7027fbz5lm0vp0zzfp1hmxnz14wx3zl9563h83br5ag0"))))
-    (arguments
-     `(#:tests? #f                            ; no check target available
-       #:disallowed-references ("doc")
-       #:phases
-       (modify-phases %standard-phases
-         (replace 'configure
-           (lambda* (#:key outputs #:allow-other-keys)
-             (let ((out (assoc-ref outputs "out"))
-                   (doc (assoc-ref outputs "doc")))
-               ;; '--docdir' is not honored, so we need to patch.
-               (substitute* "dist/Makefile.in"
-                 (("docdir[[:blank:]]*=.*")
-                  (string-append "docdir = " doc "/share/doc/bdb")))
-
-               (invoke "./dist/configure"
-                       (string-append "--prefix=" out)
-                       (string-append "CONFIG_SHELL=" (which "bash"))
-                       (string-append "SHELL=" (which "bash"))
-
-                       ;; Bdb doesn't recognize aarch64 as an architecture.
-                       ,@(if (string=? "aarch64-linux" (%current-system))
-                             '("--build=aarch64-unknown-linux-gnu")
-                             '())
-
-                       ;; Remove 7 MiB of .a files.
-                       "--disable-static"
-
-                       ;; The compatibility mode is needed by some packages,
-                       ;; notably iproute2.
-                       "--enable-compat185"
-
-                       ;; The following flag is needed so that the inclusion
-                       ;; of db_cxx.h into C++ files works; it leads to
-                       ;; HAVE_CXX_STDHEADERS being defined in db_cxx.h.
-                       "--enable-cxx")))))))))
-
 (define-public es-dump-restore
   (package
     (name "es-dump-restore")
@@ -1144,87 +1022,6 @@ browse and edit the contents, add and delete entries, all while tracking your
 changes.")
       (license license:gpl3+)))) ; no headers, see README.md
 
-(define-public sqlite
-  (package
-   (name "sqlite")
-   (replacement sqlite-3.26.0)
-   (version "3.24.0")
-   (source (origin
-            (method url-fetch)
-            (uri (let ((numeric-version
-                        (match (string-split version #\.)
-                          ((first-digit other-digits ...)
-                           (string-append first-digit
-                                          (string-pad-right
-                                           (string-concatenate
-                                            (map (cut string-pad <> 2 #\0)
-                                                 other-digits))
-                                           6 #\0))))))
-                   (string-append "https://sqlite.org/2018/sqlite-autoconf-"
-                                  numeric-version ".tar.gz")))
-            (sha256
-             (base32
-              "0jmprv2vpggzhy7ma4ynmv1jzn3pfiwzkld0kkg6hvgvqs44xlfr"))))
-   (build-system gnu-build-system)
-   (inputs `(("readline" ,readline)))
-   (arguments
-    `(#:configure-flags
-      ;; Add -DSQLITE_SECURE_DELETE, -DSQLITE_ENABLE_UNLOCK_NOTIFY and
-      ;; -DSQLITE_ENABLE_DBSTAT_VTAB to CFLAGS.  GNU Icecat will refuse
-      ;; to use the system SQLite unless these options are enabled.
-      (list (string-append "CFLAGS=-O2 -DSQLITE_SECURE_DELETE "
-                           "-DSQLITE_ENABLE_UNLOCK_NOTIFY "
-                           "-DSQLITE_ENABLE_DBSTAT_VTAB"))))
-   (home-page "https://www.sqlite.org/")
-   (synopsis "The SQLite database management system")
-   (description
-    "SQLite is a software library that implements a self-contained, serverless,
-zero-configuration, transactional SQL database engine.  SQLite is the most
-widely deployed SQL database engine in the world.  The source code for SQLite
-is in the public domain.")
-   (license license:public-domain)))
-
-(define-public sqlite-3.26.0
-  (package (inherit sqlite)
-    (version "3.26.0")
-    (source (origin
-              (method url-fetch)
-              (uri (let ((numeric-version
-                          (match (string-split version #\.)
-                            ((first-digit other-digits ...)
-                             (string-append first-digit
-                                            (string-pad-right
-                                             (string-concatenate
-                                              (map (cut string-pad <> 2 #\0)
-                                                   other-digits))
-                                             6 #\0))))))
-                     (string-append "https://sqlite.org/2018/sqlite-autoconf-"
-                                    numeric-version ".tar.gz")))
-              (sha256
-               (base32
-                "0pdzszb4sp73hl36siiv3p300jvfvbcdxi2rrmkwgs6inwznmajx"))))))
-
-;; This is used by Tracker.
-(define-public sqlite-with-fts5
-  (package/inherit sqlite
-    (name "sqlite-with-fts5")
-    (arguments
-     (substitute-keyword-arguments (package-arguments sqlite)
-       ((#:configure-flags flags)
-        `(cons "--enable-fts5" ,flags))))))
-
-;; This is used by Qt.
-(define-public sqlite-with-column-metadata
-  (package/inherit sqlite
-    (name "sqlite-with-column-metadata")
-    (arguments
-     (substitute-keyword-arguments (package-arguments sqlite)
-       ((#:configure-flags flags)
-        `(list (string-append "CFLAGS=-O2 -DSQLITE_SECURE_DELETE "
-                              "-DSQLITE_ENABLE_UNLOCK_NOTIFY "
-                              "-DSQLITE_ENABLE_DBSTAT_VTAB "
-                              "-DSQLITE_ENABLE_COLUMN_METADATA")))))))
-
 (define-public tdb
   (package
     (name "tdb")