diff options
author | Ricardo Wurmus <rekado@elephly.net> | 2017-11-17 22:34:32 +0100 |
---|---|---|
committer | Ricardo Wurmus <rekado@elephly.net> | 2017-11-17 22:36:27 +0100 |
commit | a8714bf6801cf5058fd02bcb1d352a99d12bc870 (patch) | |
tree | f516523708268fe0592e61194e0bea443e8aae01 /gnu/packages/databases.scm | |
parent | be6eb2f1e6f77d3cff3bdaef12fdc4c26c806b92 (diff) | |
download | patches-a8714bf6801cf5058fd02bcb1d352a99d12bc870.tar patches-a8714bf6801cf5058fd02bcb1d352a99d12bc870.tar.gz |
gnu: Move database packages from python.scm to databases.scm.
* gnu/packages/python.scm (python-ccm, python2-ccm, python2-pysqlite,
python-sqlalchemy, python2-sqlalchemy, python-sqlalchemy-utils,
python2-sqlalchemy-utils, python-alembic, python2-alembic,
python-pickleshare, python2-pickleshare, python-apsw, python2-apsw,
python2-neo4j-driver, python2-py2neo, python-psycopg2, python2-psycopg2,
python-sadisplay, python2-sadisplay, python-mysqlclient,
python2-mysqlclient, python-hiredis, python2-hiredis, python-fakeredis,
python2-fakeredis, python-redis, python2-redis, python-rq, python2-rq,
python-trollius-redis, python2-trollius-redis, python-sqlparse,
python2-sqlparse, python-sql, python2-sql): Move from here...
* gnu/packages/databases.scm: ...to here.
* gnu/packages/tryton.scm,
gnu/packages/python-web.scm,
gnu/packages/nutrition.scm,
gnu/packages/medical.scm: Adjust accordingly.
Diffstat (limited to 'gnu/packages/databases.scm')
-rw-r--r-- | gnu/packages/databases.scm | 564 |
1 files changed, 558 insertions, 6 deletions
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index 6bc468679a..b825a24528 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -1,27 +1,34 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2012, 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> -;;; Copyright © 2012, 2014, 2015 Andreas Enge <andreas@enge.fr> -;;; Copyright © 2013 Cyril Roelandt <tipecaml@gmail.com> +;;; Copyright © 2012, 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr> +;;; Copyright © 2013, 2017 Cyril Roelandt <tipecaml@gmail.com> ;;; Copyright © 2014, 2016 David Thompson <davet@gnu.org> ;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org> -;;; Copyright © 2015 Eric Bavier <bavier@member.fsf.org> +;;; Copyright © 2014, 2015 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2015, 2016 Sou Bunnbu <iyzsong@gmail.com> ;;; Copyright © 2015 Leo Famulari <leo@famulari.name> -;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr> +;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com> +;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org> +;;; Copyright © 2015, 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016, 2017 ng0 <contact.ng0@cryptolab.net> ;;; Copyright © 2016, 2017 Roel Janssen <roel@gnu.org> ;;; Copyright © 2016 David Craven <david@craven.ch> ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> ;;; Copyright © 2016 Andy Patterson <ajpatter@uwaterloo.ca> -;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com> +;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org> +;;; Copyright © 2016, 2017 Marius Bakke <mbakke@fastmail.com> +;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu> ;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be> +;;; Copyright © 2017 Jelle Licht <jlicht@fsfe.org> +;;; Copyright © 2017 Adriano Peluso <catonano@gmail.com> ;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net> ;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2017 Alex Vong <alexvong1995@gmail.com> ;;; Copyright © 2017 Ben Woodcroft <donttrustben@gmail.com> ;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com> ;;; Copyright © 2017 Pierre Langlois <pierre.langlois@gmx.com> -;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2015, 2017 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2017 Kristofer Buffington <kristoferbuffington@gmail.com> ;;; ;;; This file is part of GNU Guix. @@ -1950,3 +1957,548 @@ package contains an old implementation based on legacy code from S-PLUS which is being phased out. A modern MySQL client based on Rcpp is available from the RMariaDB package.") (license license:gpl2))) + +(define-public python-ccm + (package + (name "python-ccm") + (version "2.1.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "ccm" version)) + (sha256 + (base32 + "177dfxsmk3k4cih6fh6v8d91bh4nqx7ns6pc07w7m7i3cvdx3c8n")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pyyaml" ,python-pyyaml) + ;; Not listed in setup.py, but used in ccmlib/node.py for full + ;; functionality + ("python-psutil" ,python-psutil) + ("python-six" ,python-six))) + (home-page "https://github.com/pcmanus/ccm") + (synopsis "Cassandra Cluster Manager for Apache Cassandra clusters on +localhost") + (description "Cassandra Cluster Manager is a development tool for testing +local Cassandra clusters. It creates, launches and removes Cassandra clusters +on localhost.") + (license license:asl2.0))) + +(define-public python2-ccm + (package-with-python2 python-ccm)) + +(define-public python2-pysqlite + (package + (name "python2-pysqlite") + (version "2.8.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pysqlite" version)) + (sha256 + (base32 + "1424gwq9sil2ffmnizk60q36vydkv8rxs6m7xs987kz8cdc37lqp")))) + (build-system python-build-system) + (inputs + `(("sqlite" ,sqlite))) + (arguments + `(#:python ,python-2 ; incompatible with Python 3 + #:tests? #f)) ; no test target + (home-page "https://github.com/ghaering/pysqlite") + (synopsis "SQLite bindings for Python") + (description + "Pysqlite provides SQLite bindings for Python that comply to the +Database API 2.0T.") + (license license:zlib))) + +(define-public python-sqlalchemy + (package + (name "python-sqlalchemy") + (version "1.0.12") + (source + (origin + (method url-fetch) + (uri (string-append "https://pypi.python.org/packages/source/S/" + "SQLAlchemy/SQLAlchemy-" version ".tar.gz")) + (sha256 + (base32 + "1l8qclhd0s90w3pvwhi5mjxdwr5j7gw7cjka2fx6f2vqmq7f4yb6")))) + (build-system python-build-system) + (native-inputs + `(("python-cython" ,python-cython) ;for c extensions + ("python-pytest" ,python-pytest) + ("python-mock" ,python-mock))) ;for tests + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (zero? (system* "py.test"))))))) + (home-page "http://www.sqlalchemy.org") + (synopsis "Database abstraction library") + (description + "SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that +gives application developers the full power and flexibility of SQL. It +provides a full suite of well known enterprise-level persistence patterns, +designed for efficient and high-performing database access, adapted into a +simple and Pythonic domain language.") + (license license:x11))) + +(define-public python2-sqlalchemy + (package-with-python2 python-sqlalchemy)) + +(define-public python-sqlalchemy-utils + (package + (name "python-sqlalchemy-utils") + (version "0.32.13") + (source + (origin + (method url-fetch) + (uri (pypi-uri "SQLAlchemy-Utils" version)) + (sha256 + (base32 + "0vsib7gidjamzsz6w4s5pdhxzxsrkghjnm4sqwk94igjrl3i5ixj")))) + (build-system python-build-system) + (arguments + '(#:tests? #f)) ; FIXME: Many tests require a running database server. + ;; #:phases + ;; (modify-phases %standard-phases + ;; (replace 'check + ;; (lambda _ + ;; (zero? (system* "py.test" "sqlalchemy_utils" "tests"))))) + (propagated-inputs + `(("python-six" ,python-six) + ("python-sqlalchemy" ,python-sqlalchemy))) + (native-inputs + `(("python-dateutil" ,python-dateutil) + ("python-flexmock" ,python-flexmock) + ("python-psycopg2" ,python-psycopg2) + ("python-pytest" ,python-pytest) + ("python-pytz" ,python-pytz))) + (home-page "https://github.com/kvesteri/sqlalchemy-utils") + (synopsis "Various utility functions for SQLAlchemy") + (description + "SQLAlchemy-utils provides various utility functions and custom data types +for SQLAlchemy. SQLAlchemy is an SQL database abstraction library for Python. + +You might also want to install the following optional dependencies: +@enumerate +@item @code{python-passlib} +@item @code{python-babel} +@item @code{python-cryptography} +@item @code{python-pytz} +@item @code{python-psycopg2} +@item @code{python-furl} +@item @code{python-flask-babel} +@end enumerate +") + (license license:bsd-3))) + +(define-public python2-sqlalchemy-utils + (package-with-python2 python-sqlalchemy-utils)) + +(define-public python-alembic + (package + (name "python-alembic") + (version "0.9.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "alembic" version)) + (sha256 + (base32 + "01gx2syqbaxh4hr9pf7pxhlb6p36qaf99140dy19lsx1paxb9p4b")))) + (build-system python-build-system) + (native-inputs + `(("python-mock" ,python-mock) + ("python-pytest-cov" ,python-pytest-cov))) + (propagated-inputs + `(("python-dateutil" ,python-dateutil) + ("python-sqlalchemy" ,python-sqlalchemy) + ("python-mako" ,python-mako) + ("python-editor" ,python-editor))) + (home-page "http://bitbucket.org/zzzeek/alembic") + (synopsis + "Database migration tool for SQLAlchemy") + (description + "Alembic is a lightweight database migration tool for usage with the +SQLAlchemy Database Toolkit for Python.") + (license license:expat))) + +(define-public python2-alembic + (package-with-python2 python-alembic)) + +(define-public python-pickleshare + (package + (name "python-pickleshare") + (version "0.5") + (source + (origin + (method url-fetch) + (uri (string-append "https://pypi.python.org/packages/source/p/" + "pickleshare/pickleshare-" version ".tar.gz")) + (sha256 + (base32 "11ljr90j3p6qswdrbl7p4cjb2i93f6vn0vx9anzpshsx0d2mggn0")))) + (build-system python-build-system) + (propagated-inputs + `(("python-pathpy" ,python-pathpy))) + (home-page "https://github.com/vivainio/pickleshare") + (synopsis "Tiny key value database with concurrency support") + (description + "PickleShare is a small ‘shelve’-like datastore with concurrency support. +Like shelve, a PickleShareDB object acts like a normal dictionary. Unlike +shelve, many processes can access the database simultaneously. Changing a +value in database is immediately visible to other processes accessing the same +database. Concurrency is possible because the values are stored in separate +files. Hence the “database” is a directory where all files are governed by +PickleShare.") + (license license:expat))) + +(define-public python2-pickleshare + (package-with-python2 python-pickleshare)) + +(define-public python-apsw + (package + (name "python-apsw") + (version "3.9.2-r1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "apsw" version)) + (sha256 + (base32 + "0w4jb0wpx785qw42r3h4fh7gl5w2968q48i7gygybsfxck8nzffs")))) + (build-system python-build-system) + (inputs + `(("sqlite" ,sqlite))) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'build + (lambda _ + (zero? + (system* "python" "setup.py" "build" "--enable-all-extensions")))) + (add-after 'build 'build-test-helper + (lambda _ + (zero? + (system + (string-append "gcc -fPIC -shared -o ./testextension.sqlext " + "-I. -Isqlite3 src/testextension.c") )))) + (delete 'check) + (add-after 'install 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (add-installed-pythonpath inputs outputs) + (zero? (system* "python" "setup.py" "test"))))))) + (home-page "https://github.com/rogerbinns/apsw/") + (synopsis "Another Python SQLite Wrapper") + (description "APSW is a Python wrapper for the SQLite +embedded relational database engine. In contrast to other wrappers such as +pysqlite it focuses on being a minimal layer over SQLite attempting just to +translate the complete SQLite API into Python.") + (license license:zlib))) + +(define-public python2-apsw + (package-with-python2 python-apsw)) + +(define-public python2-neo4j-driver + (package + (name "python2-neo4j-driver") + ;; NOTE: When upgrading to 1.5.0, please add a python3 variant. + (version "1.4.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "neo4j-driver" version)) + (sha256 + (base32 + "011r1vh182p8mm83d8dz9rfnc3l7rf7fd00cyrbyfzi71jmc4g98")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (home-page "https://neo4j.com/developer/python/") + (synopsis "Neo4j driver code written in Python") + (description "This package provides the Neo4j Python driver that connects +to the database using Neo4j's binary protocol. It aims to be minimal, while +being idiomatic to Python.") + (license license:asl2.0))) + +(define-public python2-py2neo + (package + (name "python2-py2neo") + (version "3.1.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "py2neo" version)) + (sha256 + (base32 + "1f1q95vqcvlc3nsc33p841swnjdcjazddlq2dzi3qfnjqjrajxw1")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) + (home-page "http://py2neo.org") + (synopsis "Library and toolkit for working with Neo4j in Python") + (description "This package provides a client library and toolkit for +working with Neo4j from within Python applications and from the command +line. The core library has no external dependencies and has been carefully +designed to be easy and intuitive to use.") + (license license:asl2.0))) + +(define-public python-psycopg2 + (package + (name "python-psycopg2") + (version "2.7.3.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "psycopg2" version)) + (sha256 + (base32 + "0rda1j02ds6s28752fhmpwg761sh6jsxi1gpczqkrd28cki1cywv")))) + (build-system python-build-system) + (arguments + ;; Tests would require a postgresql database "psycopg2_test" + ;; and a running postgresql database management service. + `(#:tests? #f)) ; TODO re-enable after providing a test-db. + (inputs + `(("postgresql" ,postgresql))) ; libpq + (home-page "http://initd.org/psycopg/") + (synopsis "Python PostgreSQL adapter") + (description + "psycopg2 is a thread-safe PostgreSQL adapter that implements DB-API 2.0. ") + (license license:lgpl3+))) + +(define-public python2-psycopg2 + (package-with-python2 python-psycopg2)) + +(define-public python-sadisplay + (package + (name "python-sadisplay") + (version "0.4.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "sadisplay" version)) + (sha256 + (base32 + "0zqad2fl7q26p090qmqgmxbm6iwgf9zij1w8da1g3wdgjj72ql05")))) + (build-system python-build-system) + (propagated-inputs + `(("python-sqlalchemy" ,python-sqlalchemy))) + (native-inputs + `(("python-nose" ,python-nose))) + (home-page "https://bitbucket.org/estin/sadisplay") + (synopsis "SQLAlchemy schema displayer") + (description "This package provides a program to build Entity +Relationship diagrams from a SQLAlchemy model (or directly from the +database).") + (license license:bsd-3))) + +(define-public python2-sadisplay + (package-with-python2 python-sadisplay)) + +(define-public python-mysqlclient + (package + (name "python-mysqlclient") + (version "1.3.10") + (source + (origin + (method url-fetch) + (uri (pypi-uri "mysqlclient" version)) + (sha256 + (base32 + "0qkj570x4rbsblji6frvsvp2v1ap32dqzj1lq62zp9515ffsyaj5")))) + (build-system python-build-system) + (native-inputs + `(("mariadb" ,mariadb) + ("nose" ,python-nose) + ("mock" ,python-mock) + ("py.test" ,python-pytest))) + (inputs + `(("mysql" ,mysql) + ("libz" ,zlib) + ("openssl" ,openssl))) + (home-page "https://github.com/PyMySQL/mysqlclient-python") + (synopsis "MySQLdb is an interface to the popular MySQL database server for Python") + (description "MySQLdb is an interface to the popular MySQL database server +for Python. The design goals are: +@enumerate +@item Compliance with Python database API version 2.0 [PEP-0249], +@item Thread-safety, +@item Thread-friendliness (threads will not block each other). +@end enumerate") + (license license:gpl2))) + +(define-public python2-mysqlclient + (package-with-python2 python-mysqlclient)) + +(define-public python-hiredis + (package + (name "python-hiredis") + (version "0.2.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "hiredis" version)) + (sha256 + (base32 + "1dfm2k9l9zar9nw9fwmm74zrgraxdxs04vx9li56fjcf289qx5fa")))) + (build-system python-build-system) + (arguments + ;; no tests + `(#:tests? #f)) + (home-page "https://github.com/redis/hiredis-py") + (synopsis "Python extension that wraps protocol parsing code in hiredis") + (description "Python-hiredis is a python extension that wraps protocol +parsing code in hiredis. It primarily speeds up parsing of multi bulk replies.") + (license license:bsd-3))) + +(define-public python2-hiredis + (package-with-python2 python-hiredis)) + +(define-public python-fakeredis + (package + (name "python-fakeredis") + (version "0.8.2") + (source + (origin + (method url-fetch) + (uri (pypi-uri "fakeredis" version)) + (sha256 + (base32 + "0zncahj3byyasyfx9i7k991ph0n0lq8v3a21pqri5qxn9564bk9r")))) + (build-system python-build-system) + (arguments + ;; no tests + `(#:tests? #f)) + (home-page "https://github.com/jamesls/fakeredis") + (synopsis "Fake implementation of redis API for testing purposes") + (description "Fakeredis is a pure python implementation of the redis-py +python client that simulates talking to a redis server. This was created for a +single purpose: to write unittests. Setting up redis is not hard, but many time + you want to write unittests that do not talk to an external server (such as +redis). This module now allows tests to simply use this module as a reasonable +substitute for redis.") + (license license:bsd-3))) + +(define-public python2-fakeredis + (package-with-python2 python-fakeredis)) + +(define-public python-redis + (package + (name "python-redis") + (version "2.10.5") + (source + (origin + (method url-fetch) + (uri (pypi-uri "redis" version)) + (sha256 + (base32 "0csmrkxb29x7xs9b51zplwkkq2hwnbh9jns1g85dykn5rxmaxysx")))) + (build-system python-build-system) + ;; Tests require a running Redis server + (arguments '(#:tests? #f)) + ;; As long as we are not running test, we do not need this input :-) + ;;(native-inputs + ;; `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/andymccurdy/redis-py") + (synopsis "Redis Python client") + (description + "This package provides a Python interface to the Redis key-value store.") + (license license:expat))) + +(define-public python2-redis + (package-with-python2 python-redis)) + +(define-public python-rq + (package + (name "python-rq") + (version "0.7.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rq" version)) + (sha256 + (base32 "0gaq5pnh0zy46r8jvygi0ifbvz3pq6i7xla78ijcgjw0x77qzsdh")))) + (build-system python-build-system) + (propagated-inputs + `(("python-click" ,python-click) + ("python-redis" ,python-redis))) + (home-page "http://python-rq.org/") + (synopsis "Simple job queues for Python") + (description + "RQ (Redis Queue) is a simple Python library for queueing jobs and +processing them in the background with workers. It is backed by Redis and it +is designed to have a low barrier to entry.") + (license license:bsd-2))) + +(define-public python2-rq + (package-with-python2 python-rq)) + +(define-public python-trollius-redis + (package + (name "python-trollius-redis") + (version "0.1.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "trollius_redis" version)) + (sha256 + (base32 + "0k3vypszmgmaipgw9xscvgm79h2zd6p6ci8gdp5sxl6g5kbqr9fy")))) + (build-system python-build-system) + ;; TODO: Tests require packaging 'hiredis'. + (arguments '(#:tests? #f)) + (home-page "https://github.com/benjolitz/trollius-redis") + (synopsis "Port of asyncio-redis to trollius") + (description "@code{trollius-redis} is a Redis client for Python + trollius. It is an asynchronious IO (PEP 3156) implementation of the + Redis protocol.") + (license license:bsd-2))) + +(define-public python2-trollius-redis + (package-with-python2 python-trollius-redis)) + +(define-public python-sqlparse + (package + (name "python-sqlparse") + (version "0.2.4") + (source (origin + (method url-fetch) + (uri (pypi-uri "sqlparse" version)) + (sha256 + (base32 + "1v3xh0bkfhb262dbndgzhivpnhdwavdzz8jjhx9vx0xbrx2880nf")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda _ (zero? (system* "py.test"))))))) + (native-inputs + `(("python-pytest" ,python-pytest))) + (home-page "https://github.com/andialbrecht/sqlparse") + (synopsis "Non-validating SQL parser") + (description "Sqlparse is a non-validating SQL parser for Python. It +provides support for parsing, splitting and formatting SQL statements.") + (license license:bsd-3))) + +(define-public python2-sqlparse + (package-with-python2 python-sqlparse)) + +(define-public python-sql + (package + (name "python-sql") + (version "0.9") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-sql" version)) + (sha256 + (base32 + "0p6kaqj02vz0habmdx37zjk6hjxdfm8aw737zs059vvpr70ird87")))) + (build-system python-build-system) + (home-page "https://python-sql.tryton.org/") + (synopsis "Library to write SQL queries in a pythonic way") + (description "@code{python-sql} is a library to write SQL queries, that +transforms idiomatic python function calls to well-formed SQL queries.") + (license license:bsd-3))) + +(define-public python2-sql + (package-with-python2 python-sql)) |