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| author | Ricardo Wurmus <rekado@elephly.net> | 2018-06-05 11:14:38 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2018-06-05 11:14:38 +0200 |
| commit | e847f402c1b7d5ae6a2e42749616d1b83d0004fd (patch) | |
| tree | fc4c083db5ed28cc84beb38ccfe2e8a152680e7e /gnu/packages/bioinformatics.scm | |
| parent | d7e6fb6d7ebdd5b700b2a89b3902904fe459abdf (diff) | |
| download | patches-e847f402c1b7d5ae6a2e42749616d1b83d0004fd.tar patches-e847f402c1b7d5ae6a2e42749616d1b83d0004fd.tar.gz | |
gnu: java-picard-2.10.3: Delete failing build phase.
* gnu/packages/bioinformatics.scm (java-picard-2.10.3)[arguments]: Delete
generate-jar-indices phase.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 2 |
1 files changed, 2 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 57e2f00a99..b2a4ab2f8f 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -3211,6 +3211,8 @@ VCF.") (sxml xpath)) #:phases (modify-phases %standard-phases + ;; FIXME: this phase fails with "duplicate entry: htsjdk/samtools/AbstractBAMFileIndex$1.class" + (delete 'generate-jar-indices) (add-after 'unpack 'remove-useless-build.xml (lambda _ (delete-file "build.xml") #t)) ;; This is necessary to ensure that htsjdk is found when using |