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authorRicardo Wurmus <ricardo.wurmus@mdc-berlin.de>2014-12-15 12:36:10 +0100
committerLudovic Courtès <ludo@gnu.org>2014-12-16 18:17:15 +0100
commitf3cd952b45ea0bb788287fda03ebe796eb9461b8 (patch)
tree73df440b4532c1ce59ae523f85ae9920e7dafee3 /gnu/packages/bioinformatics.scm
parenta142e38e9dfb56761bd614a28022f9c1711bd8b7 (diff)
downloadpatches-f3cd952b45ea0bb788287fda03ebe796eb9461b8.tar
patches-f3cd952b45ea0bb788287fda03ebe796eb9461b8.tar.gz
gnu: samtools: disable tests for non-64-bit systems
* gnu/packages/bioinformatics.scm (samtools): disable tests for all non-64-bit systems because of an upstream bug in the test data. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm9
1 files changed, 8 insertions, 1 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 6f6178a3ff..7e802278ac 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -43,7 +43,14 @@
"1y5p2hs4gif891b4ik20275a8xf3qrr1zh9wpysp4g8m0g1jckf2"))))
(build-system gnu-build-system)
(arguments
- '(#:make-flags (list (string-append "prefix=" (assoc-ref %outputs "out")))
+ `(;; There are 87 test failures when building on non-64-bit architectures
+ ;; due to invalid test data. This has since been fixed upstream (see
+ ;; <https://github.com/samtools/samtools/pull/307>), but as there has
+ ;; not been a new release we disable the tests for all non-64-bit
+ ;; systems.
+ #:tests? ,(string=? (or (%current-system) (%current-target-system))
+ "x86_64-linux")
+ #:make-flags (list (string-append "prefix=" (assoc-ref %outputs "out")))
#:phases
(alist-cons-after
'unpack